RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 MVPQ14764 893 aaKnown RBP18.67■□□□□ 0.58
SMTN-219ENST00000493335 NSD3Q9BZ95 1437 aa18.67■□□□□ 0.58
SMTN-219ENST00000493335 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
SMTN-219ENST00000493335 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
SMTN-219ENST00000493335 NGEFQ8N5V2 710 aa18.65■□□□□ 0.58
SMTN-219ENST00000493335 LNPKQ9C0E8 428 aa18.65■□□□□ 0.58
SMTN-219ENST00000493335 NINLQ9Y2I6 1382 aa18.65■□□□□ 0.58
SMTN-219ENST00000493335 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.58
SMTN-219ENST00000493335 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
SMTN-219ENST00000493335 ABCC2Q92887 1545 aa18.64■□□□□ 0.57
SMTN-219ENST00000493335 NLRP1Q9C000 1473 aa18.64■□□□□ 0.57
SMTN-219ENST00000493335 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.57
SMTN-219ENST00000493335 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
SMTN-219ENST00000493335 SYNMO15061 1565 aa18.63■□□□□ 0.57
SMTN-219ENST00000493335 LAMC1P11047 1609 aa18.63■□□□□ 0.57
SMTN-219ENST00000493335 TRIM44Q96DX7 344 aaPredicted RBP18.63■□□□□ 0.57
SMTN-219ENST00000493335 NPC1L1Q9UHC9 1359 aa18.63■□□□□ 0.57
SMTN-219ENST00000493335 DUOX2Q9NRD8 1548 aa18.62■□□□□ 0.57
SMTN-219ENST00000493335 UNC13BO14795 1591 aa18.62■□□□□ 0.57
SMTN-219ENST00000493335 WDR63Q8IWG1 891 aa18.61■□□□□ 0.57
SMTN-219ENST00000493335 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
SMTN-219ENST00000493335 TRIM27P14373 513 aa18.61■□□□□ 0.57
SMTN-219ENST00000493335 MAST1Q9Y2H9 1570 aa18.61■□□□□ 0.57
SMTN-219ENST00000493335 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
SMTN-219ENST00000493335 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
SMTN-219ENST00000493335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMTN-219ENST00000493335 HSP90AA2PQ14568 343 aaPredicted RBP18.6■□□□□ 0.57
SMTN-219ENST00000493335 IQGAP3Q86VI3 1631 aa18.6■□□□□ 0.57
SMTN-219ENST00000493335 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
SMTN-219ENST00000493335 GRPEL1Q9HAV7 217 aa18.6■□□□□ 0.57
SMTN-219ENST00000493335 NOB1Q9ULX3 412 aaKnown RBP18.6■□□□□ 0.57
SMTN-219ENST00000493335 KANK1Q14678 1352 aa18.59■□□□□ 0.57
SMTN-219ENST00000493335 ERVK-7P63135 1459 aa18.59■□□□□ 0.57
SMTN-219ENST00000493335 MRE11P49959 708 aa18.59■□□□□ 0.57
SMTN-219ENST00000493335 ATP10AO60312 1499 aa18.58■□□□□ 0.57
SMTN-219ENST00000493335 MADDQ8WXG6 1647 aa18.58■□□□□ 0.56
SMTN-219ENST00000493335 FSD2A1L4K1 749 aa18.57■□□□□ 0.56
SMTN-219ENST00000493335 TMEM57Q8N5G2 664 aa18.57■□□□□ 0.56
SMTN-219ENST00000493335 RRP9O43818 475 aaKnown RBP18.56■□□□□ 0.56
SMTN-219ENST00000493335 DDX11L8A8MPP1 907 aa18.56■□□□□ 0.56
SMTN-219ENST00000493335 GGNBP2Q9H3C7 697 aa18.56■□□□□ 0.56
SMTN-219ENST00000493335 C1orf115Q9H7X2 142 aa18.56■□□□□ 0.56
SMTN-219ENST00000493335 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
SMTN-219ENST00000493335 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
SMTN-219ENST00000493335 DDX19BQ9UMR2 479 aa18.55■□□□□ 0.56
SMTN-219ENST00000493335 SCAPERQ9BY12 1400 aa18.55■□□□□ 0.56
SMTN-219ENST00000493335 AAMPQ13685 434 aa18.55■□□□□ 0.56
SMTN-219ENST00000493335 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
SMTN-219ENST00000493335 RNF17Q9BXT8 1623 aaKnown RBP18.54■□□□□ 0.56
SMTN-219ENST00000493335 TNPO1Q92973 898 aaKnown RBP18.54■□□□□ 0.56
SMTN-219ENST00000493335 STK26Q9P289 416 aa18.54■□□□□ 0.56
SMTN-219ENST00000493335 CLCN1P35523 988 aa18.54■□□□□ 0.56
SMTN-219ENST00000493335 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
SMTN-219ENST00000493335 ANKRD45Q5TZF3 282 aa18.53■□□□□ 0.56
SMTN-219ENST00000493335 ESPNB1AK53 854 aa18.53■□□□□ 0.56
SMTN-219ENST00000493335 ELL2O00472 640 aaPredicted RBP18.53■□□□□ 0.56
SMTN-219ENST00000493335 GGT6Q6P531 493 aa18.53■□□□□ 0.56
SMTN-219ENST00000493335 NCLP19338 710 aaKnown RBP18.52■□□□□ 0.56
SMTN-219ENST00000493335 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.55
SMTN-219ENST00000493335 IQGAP1P46940 1657 aa18.51■□□□□ 0.55
SMTN-219ENST00000493335 RIPK4P57078 832 aa18.51■□□□□ 0.55
SMTN-219ENST00000493335 GAS2L3Q86XJ1 694 aa18.51■□□□□ 0.55
SMTN-219ENST00000493335 KDM5AP29375 1690 aaKnown RBP18.51■□□□□ 0.55
SMTN-219ENST00000493335 ERCC6L2Q5T890 1561 aa18.5■□□□□ 0.55
SMTN-219ENST00000493335 GBP4Q96PP9 640 aa18.5■□□□□ 0.55
SMTN-219ENST00000493335 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
SMTN-219ENST00000493335 SRPK2P78362 688 aaKnown RBP18.5■□□□□ 0.55
SMTN-219ENST00000493335 VIRMAQ69YN4 1812 aaKnown RBP18.5■□□□□ 0.55
SMTN-219ENST00000493335 PLCH2O75038 1416 aa18.49■□□□□ 0.55
SMTN-219ENST00000493335 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
SMTN-219ENST00000493335 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
SMTN-219ENST00000493335 MYOM1P52179 1685 aa18.48■□□□□ 0.55
SMTN-219ENST00000493335 PTPRTO14522 1441 aa18.48■□□□□ 0.55
SMTN-219ENST00000493335 NOS1P29475 1434 aa18.48■□□□□ 0.55
SMTN-219ENST00000493335 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
SMTN-219ENST00000493335 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
SMTN-219ENST00000493335 HDAC1Q13547 482 aaPredicted RBP18.47■□□□□ 0.55
SMTN-219ENST00000493335 PLXNC1O60486 1568 aa18.47■□□□□ 0.55
SMTN-219ENST00000493335 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
SMTN-219ENST00000493335 CHD1LQ86WJ1 897 aa18.46■□□□□ 0.55
SMTN-219ENST00000493335 TRPM2O94759 1503 aa18.46■□□□□ 0.55
SMTN-219ENST00000493335 CHD1O14646 1710 aa18.46■□□□□ 0.55
SMTN-219ENST00000493335 FBLN1P23142 703 aa18.45■□□□□ 0.54
SMTN-219ENST00000493335 ZNF692Q9BU19 519 aaPredicted RBP18.45■□□□□ 0.54
SMTN-219ENST00000493335 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
SMTN-219ENST00000493335 SSFA2P28290 1259 aa18.45■□□□□ 0.54
SMTN-219ENST00000493335 SMC5Q8IY18 1101 aa18.45■□□□□ 0.54
SMTN-219ENST00000493335 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
SMTN-219ENST00000493335 DDX49Q9Y6V7 483 aaKnown RBP18.44■□□□□ 0.54
SMTN-219ENST00000493335 ANP32BQ92688 251 aaKnown RBP18.44■□□□□ 0.54
SMTN-219ENST00000493335 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
SMTN-219ENST00000493335 TRIM35Q9UPQ4 493 aa18.44■□□□□ 0.54
SMTN-219ENST00000493335 APBB1O00213 710 aa18.43■□□□□ 0.54
SMTN-219ENST00000493335 EVC2Q86UK5 1308 aa18.42■□□□□ 0.54
SMTN-219ENST00000493335 GOLGA6L22H0YM25 854 aa18.42■□□□□ 0.54
SMTN-219ENST00000493335 NUCB1Q02818 461 aa18.42■□□□□ 0.54
SMTN-219ENST00000493335 RTEL1-TNFRSF6BF6WH68 1400 aa18.42■□□□□ 0.54
SMTN-219ENST00000493335 CEP152O94986 1710 aa18.4■□□□□ 0.54
SMTN-219ENST00000493335 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
SMTN-219ENST00000493335 NASPP49321 788 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms