RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 ROBO2Q9HCK4 1378 aa23.98■■□□□ 1.43
CDK11A-220ENST00000492390 PRAG1Q86YV5 1406 aa23.96■■□□□ 1.43
CDK11A-220ENST00000492390 MARF1Q9Y4F3 1742 aaKnown RBP23.94■■□□□ 1.42
CDK11A-220ENST00000492390 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
CDK11A-220ENST00000492390 SF3B2Q13435 895 aaKnown RBP23.93■■□□□ 1.42
CDK11A-220ENST00000492390 ESCO1Q5FWF5 840 aa23.93■■□□□ 1.42
CDK11A-220ENST00000492390 UNC5CLQ8IV45 518 aa23.93■■□□□ 1.42
CDK11A-220ENST00000492390 DEFB132Q7Z7B7 95 aa23.92■■□□□ 1.42
CDK11A-220ENST00000492390 PXDNQ92626 1479 aa23.92■■□□□ 1.42
CDK11A-220ENST00000492390 LRP5O75197 1615 aa23.92■■□□□ 1.42
CDK11A-220ENST00000492390 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.91■■□□□ 1.42
CDK11A-220ENST00000492390 VGFO15240 615 aaPredicted RBP23.91■■□□□ 1.42
CDK11A-220ENST00000492390 RALGAPBQ86X10 1494 aa23.91■■□□□ 1.42
CDK11A-220ENST00000492390 FOXO3O43524 673 aa23.89■■□□□ 1.41
CDK11A-220ENST00000492390 GLI3P10071 1580 aa23.89■■□□□ 1.41
CDK11A-220ENST00000492390 LRPPRCP42704 1394 aaKnown RBP23.89■■□□□ 1.41
CDK11A-220ENST00000492390 CLTCL1P53675 1640 aa23.88■■□□□ 1.41
CDK11A-220ENST00000492390 SLIT2O94813 1529 aa23.88■■□□□ 1.41
CDK11A-220ENST00000492390 XPCQ01831 940 aaPredicted RBP23.86■■□□□ 1.41
CDK11A-220ENST00000492390 CDC42BPGQ6DT37 1551 aa23.85■■□□□ 1.41
CDK11A-220ENST00000492390 SEPT12Q8IYM1 358 aa23.84■■□□□ 1.41
CDK11A-220ENST00000492390 KIF1BO60333 1816 aa23.83■■□□□ 1.41
CDK11A-220ENST00000492390 RPGRIP1LQ68CZ1 1315 aa23.82■■□□□ 1.4
CDK11A-220ENST00000492390 BRWD3Q6RI45 1802 aa23.81■■□□□ 1.4
CDK11A-220ENST00000492390 ONECUT3O60422 494 aaPredicted RBP23.8■■□□□ 1.4
CDK11A-220ENST00000492390 ITGAEP38570 1179 aa23.8■■□□□ 1.4
CDK11A-220ENST00000492390 SPATA31A3Q5VYP0 1347 aa23.8■■□□□ 1.4
CDK11A-220ENST00000492390 VPS72Q15906 364 aa23.79■■□□□ 1.4
CDK11A-220ENST00000492390 HRCP23327 699 aa23.78■■□□□ 1.4
CDK11A-220ENST00000492390 KRT27Q7Z3Y8 459 aa23.78■■□□□ 1.4
CDK11A-220ENST00000492390 NAIPQ13075 1403 aa23.76■■□□□ 1.39
CDK11A-220ENST00000492390 PSDA5PKW4 1024 aaPredicted RBP23.76■■□□□ 1.39
CDK11A-220ENST00000492390 BAG6P46379 1132 aa23.76■■□□□ 1.39
CDK11A-220ENST00000492390 USP32Q8NFA0 1604 aa23.75■■□□□ 1.39
CDK11A-220ENST00000492390 NUTM2FA1L443 756 aa23.74■■□□□ 1.39
CDK11A-220ENST00000492390 CCDC144AA2RUR9 1427 aa23.74■■□□□ 1.39
CDK11A-220ENST00000492390 HAP1P54257 671 aaPredicted RBP23.72■■□□□ 1.39
CDK11A-220ENST00000492390 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
CDK11A-220ENST00000492390 KRT28Q7Z3Y7 464 aa23.71■■□□□ 1.39
CDK11A-220ENST00000492390 TECPR2O15040 1411 aa23.69■■□□□ 1.38
CDK11A-220ENST00000492390 WAPLQ7Z5K2 1190 aa23.69■■□□□ 1.38
CDK11A-220ENST00000492390 KIF1AQ12756 1690 aa23.68■■□□□ 1.38
CDK11A-220ENST00000492390 NWD2Q9ULI1 1742 aa23.67■■□□□ 1.38
CDK11A-220ENST00000492390 PPLO60437 1756 aa23.67■■□□□ 1.38
CDK11A-220ENST00000492390 PSME1Q06323 249 aa23.66■■□□□ 1.38
CDK11A-220ENST00000492390 STK26Q9P289 416 aa23.66■■□□□ 1.38
CDK11A-220ENST00000492390 TNS3Q68CZ2 1445 aa23.66■■□□□ 1.38
CDK11A-220ENST00000492390 CABLES1Q8TDN4 633 aa23.65■■□□□ 1.38
CDK11A-220ENST00000492390 ABCC11Q96J66 1382 aa23.65■■□□□ 1.38
CDK11A-220ENST00000492390 A0A0G2JS52 829 aa23.64■■□□□ 1.37
CDK11A-220ENST00000492390 MYT1Q01538 1121 aa23.64■■□□□ 1.37
CDK11A-220ENST00000492390 PLCH1Q4KWH8 1693 aa23.64■■□□□ 1.37
CDK11A-220ENST00000492390 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
CDK11A-220ENST00000492390 FMN2Q9NZ56 1722 aa23.63■■□□□ 1.37
CDK11A-220ENST00000492390 R3HDM1Q15032 1099 aaKnown RBP23.61■■□□□ 1.37
CDK11A-220ENST00000492390 PHF8Q9UPP1 1060 aa23.61■■□□□ 1.37
CDK11A-220ENST00000492390 SBNO1A3KN83 1393 aa23.61■■□□□ 1.37
CDK11A-220ENST00000492390 PLEKHH1Q9ULM0 1364 aa23.61■■□□□ 1.37
CDK11A-220ENST00000492390 ADGRF5Q8IZF2 1346 aa23.6■■□□□ 1.37
CDK11A-220ENST00000492390 FAM83GA6ND36 823 aa23.6■■□□□ 1.37
CDK11A-220ENST00000492390 FAM98CQ17RN3 349 aaKnown RBP23.6■■□□□ 1.37
CDK11A-220ENST00000492390 ARHGEF10O15013 1369 aa23.6■■□□□ 1.37
CDK11A-220ENST00000492390 DISP2A7MBM2 1401 aa23.58■■□□□ 1.36
CDK11A-220ENST00000492390 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.36
CDK11A-220ENST00000492390 PLEKHG5O94827 1062 aa23.57■■□□□ 1.36
CDK11A-220ENST00000492390 LMOD2Q6P5Q4 547 aa23.57■■□□□ 1.36
CDK11A-220ENST00000492390 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
CDK11A-220ENST00000492390 KNDC1Q76NI1 1749 aa23.56■■□□□ 1.36
CDK11A-220ENST00000492390 SIRT1Q96EB6 747 aa23.56■■□□□ 1.36
CDK11A-220ENST00000492390 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
CDK11A-220ENST00000492390 ABCA3Q99758 1704 aa23.54■■□□□ 1.36
CDK11A-220ENST00000492390 SLC4A1APQ9BWU0 796 aaKnown RBP23.54■■□□□ 1.36
CDK11A-220ENST00000492390 YY1P25490 414 aa23.53■■□□□ 1.36
CDK11A-220ENST00000492390 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
CDK11A-220ENST00000492390 NRXN1Q9ULB1 1477 aa23.53■■□□□ 1.36
CDK11A-220ENST00000492390 ANKRD30BQ9BXX2 1392 aa23.52■■□□□ 1.36
CDK11A-220ENST00000492390 YTHDC2Q9H6S0 1430 aaKnown RBP23.51■■□□□ 1.35
CDK11A-220ENST00000492390 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
CDK11A-220ENST00000492390 EZH2Q15910 746 aaKnown RBP23.5■■□□□ 1.35
CDK11A-220ENST00000492390 FAM182BQ5T319 152 aa23.5■■□□□ 1.35
CDK11A-220ENST00000492390 SPATA31A5Q5VU36 1347 aa23.49■■□□□ 1.35
CDK11A-220ENST00000492390 SPATA31A7Q8IWB4 1347 aa23.49■■□□□ 1.35
CDK11A-220ENST00000492390 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
CDK11A-220ENST00000492390 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
CDK11A-220ENST00000492390 CAMKK2Q96RR4 588 aa23.48■■□□□ 1.35
CDK11A-220ENST00000492390 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
CDK11A-220ENST00000492390 PIK3C2GO75747 1445 aa23.47■■□□□ 1.35
CDK11A-220ENST00000492390 COL14A1Q05707 1796 aaKnown RBP23.45■■□□□ 1.34
CDK11A-220ENST00000492390 TNS1Q9HBL0 1735 aaKnown RBP23.45■■□□□ 1.34
CDK11A-220ENST00000492390 SPATA31E1Q6ZUB1 1445 aa23.45■■□□□ 1.34
CDK11A-220ENST00000492390 PARD3Q8TEW0 1356 aa23.45■■□□□ 1.34
CDK11A-220ENST00000492390 THSD7AQ9UPZ6 1657 aa23.44■■□□□ 1.34
CDK11A-220ENST00000492390 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
CDK11A-220ENST00000492390 FAM196AQ6ZSG2 479 aa23.43■■□□□ 1.34
CDK11A-220ENST00000492390 PMFBP1Q8TBY8 1022 aa23.43■■□□□ 1.34
CDK11A-220ENST00000492390 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
CDK11A-220ENST00000492390 TRIM37O94972 964 aa23.41■■□□□ 1.34
CDK11A-220ENST00000492390 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
CDK11A-220ENST00000492390 C14orf93Q9H972 538 aaKnown RBP23.4■■□□□ 1.34
CDK11A-220ENST00000492390 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms