RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
CDK11A-220ENST00000492390 ABCC9O60706 1549 aa36.94■■■■□ 3.5
CDK11A-220ENST00000492390 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
CDK11A-220ENST00000492390 DNAJC5BQ9UF47 199 aa35.34■■■■□ 3.25
CDK11A-220ENST00000492390 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
CDK11A-220ENST00000492390 NACADO15069 1562 aa34.47■■■■□ 3.11
CDK11A-220ENST00000492390 PABPN1Q86U42 306 aaKnown RBP eCLIP34.29■■■■□ 3.08
CDK11A-220ENST00000492390 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
CDK11A-220ENST00000492390 UNC13AQ9UPW8 1703 aa33.98■■■■□ 3.03
CDK11A-220ENST00000492390 BICRAQ9NZM4 1560 aa33.85■■■■□ 3.01
CDK11A-220ENST00000492390 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
CDK11A-220ENST00000492390 SHROOM4Q9ULL8 1493 aa33.4■■■□□ 2.94
CDK11A-220ENST00000492390 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
CDK11A-220ENST00000492390 CC2D2AQ9P2K1 1620 aa33.32■■■□□ 2.92
CDK11A-220ENST00000492390 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
CDK11A-220ENST00000492390 DCAF1Q9Y4B6 1507 aa33.07■■■□□ 2.88
CDK11A-220ENST00000492390 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
CDK11A-220ENST00000492390 ZCCHC6Q5VYS8 1495 aaKnown RBP33.02■■■□□ 2.88
CDK11A-220ENST00000492390 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
CDK11A-220ENST00000492390 CUX2O14529 1486 aa32.2■■■□□ 2.75
CDK11A-220ENST00000492390 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
CDK11A-220ENST00000492390 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
CDK11A-220ENST00000492390 ATAD2BQ9ULI0 1458 aa31.62■■■□□ 2.65
CDK11A-220ENST00000492390 HMGXB3Q12766 1538 aa31.51■■■□□ 2.63
CDK11A-220ENST00000492390 NESP48681 1621 aa31.51■■■□□ 2.63
CDK11A-220ENST00000492390 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
CDK11A-220ENST00000492390 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
CDK11A-220ENST00000492390 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
CDK11A-220ENST00000492390 BAZ1BQ9UIG0 1483 aaKnown RBP31.26■■■□□ 2.59
CDK11A-220ENST00000492390 TRIM41Q8WV44 630 aa31.22■■■□□ 2.59
CDK11A-220ENST00000492390 LAMC3Q9Y6N6 1575 aa31.22■■■□□ 2.59
CDK11A-220ENST00000492390 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
CDK11A-220ENST00000492390 PEG3Q9GZU2 1588 aa31.1■■■□□ 2.57
CDK11A-220ENST00000492390 PDS5BQ9NTI5 1447 aa31.1■■■□□ 2.57
CDK11A-220ENST00000492390 KIF21AQ7Z4S6 1674 aa31.04■■■□□ 2.56
CDK11A-220ENST00000492390 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
CDK11A-220ENST00000492390 MRC2Q9UBG0 1479 aa30.83■■■□□ 2.53
CDK11A-220ENST00000492390 MROH2BQ7Z745 1585 aa30.82■■■□□ 2.52
CDK11A-220ENST00000492390 WDR62O43379 1518 aa30.78■■■□□ 2.52
CDK11A-220ENST00000492390 OSCARQ8IYS5 282 aa30.63■■■□□ 2.49
CDK11A-220ENST00000492390 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
CDK11A-220ENST00000492390 FANCD2Q9BXW9 1451 aa30.46■■■□□ 2.47
CDK11A-220ENST00000492390 WIZO95785 1651 aa30.38■■■□□ 2.45
CDK11A-220ENST00000492390 CFTRP13569 1480 aa30.33■■■□□ 2.45
CDK11A-220ENST00000492390 URB2Q14146 1524 aaKnown RBP30.24■■■□□ 2.43
CDK11A-220ENST00000492390 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
CDK11A-220ENST00000492390 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
CDK11A-220ENST00000492390 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
CDK11A-220ENST00000492390 ARHGEF11O15085 1522 aa30.08■■■□□ 2.41
CDK11A-220ENST00000492390 IFT140Q96RY7 1462 aa30■■■□□ 2.39
CDK11A-220ENST00000492390 TOP2AP11388 1531 aaKnown RBP29.99■■■□□ 2.39
CDK11A-220ENST00000492390 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
CDK11A-220ENST00000492390 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
CDK11A-220ENST00000492390 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
CDK11A-220ENST00000492390 PRDM2Q13029 1718 aa29.86■■■□□ 2.37
CDK11A-220ENST00000492390 TRHP20396 242 aaPredicted RBP29.84■■■□□ 2.37
CDK11A-220ENST00000492390 TOPBP1Q92547 1522 aa29.8■■■□□ 2.36
CDK11A-220ENST00000492390 EIF4G3O43432 1585 aaKnown RBP29.76■■■□□ 2.35
CDK11A-220ENST00000492390 ABCC8Q09428 1581 aa29.74■■■□□ 2.35
CDK11A-220ENST00000492390 ARAP1Q96P48 1450 aa29.73■■■□□ 2.35
CDK11A-220ENST00000492390 CCDC88BA6NC98 1476 aa29.67■■■□□ 2.34
CDK11A-220ENST00000492390 CHD1O14646 1710 aa29.65■■■□□ 2.34
CDK11A-220ENST00000492390 AQRO60306 1485 aaKnown RBP eCLIP29.64■■■□□ 2.341e-8■■□□□ 13.6
CDK11A-220ENST00000492390 DNMBPQ6XZF7 1577 aa29.61■■■□□ 2.33
CDK11A-220ENST00000492390 FBLN2P98095 1184 aa29.6■■■□□ 2.33
CDK11A-220ENST00000492390 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
CDK11A-220ENST00000492390 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
CDK11A-220ENST00000492390 POLA1P09884 1462 aaPredicted RBP29.45■■■□□ 2.31
CDK11A-220ENST00000492390 TDRD9Q8NDG6 1382 aaKnown RBP29.35■■■□□ 2.29
CDK11A-220ENST00000492390 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
CDK11A-220ENST00000492390 RAD54L2Q9Y4B4 1467 aa29.34■■■□□ 2.29
CDK11A-220ENST00000492390 SOGA1O94964 1423 aa29.33■■■□□ 2.29
CDK11A-220ENST00000492390 SNAPC4Q5SXM2 1469 aa29.3■■■□□ 2.28
CDK11A-220ENST00000492390 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
CDK11A-220ENST00000492390 SYNJ1O43426 1573 aa29.28■■■□□ 2.28
CDK11A-220ENST00000492390 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
CDK11A-220ENST00000492390 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
CDK11A-220ENST00000492390 GRIN2BQ13224 1484 aa29.16■■■□□ 2.26
CDK11A-220ENST00000492390 FGD5Q6ZNL6 1462 aa29.15■■■□□ 2.26
CDK11A-220ENST00000492390 SYNJ2O15056 1496 aa29.14■■■□□ 2.26
CDK11A-220ENST00000492390 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
CDK11A-220ENST00000492390 CUX1P39880 1505 aa28.99■■■□□ 2.23
CDK11A-220ENST00000492390 PBRM1Q86U86 1689 aa28.9■■■□□ 2.22
CDK11A-220ENST00000492390 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
CDK11A-220ENST00000492390 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
CDK11A-220ENST00000492390 ABCA5Q8WWZ7 1642 aa28.79■■■□□ 2.2
CDK11A-220ENST00000492390 GRIN2AQ12879 1464 aa28.77■■■□□ 2.2
CDK11A-220ENST00000492390 CEP170Q5SW79 1584 aa28.73■■■□□ 2.19
CDK11A-220ENST00000492390 NUP160Q12769 1436 aa28.71■■■□□ 2.19
CDK11A-220ENST00000492390 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
CDK11A-220ENST00000492390 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
CDK11A-220ENST00000492390 KIF13AQ9H1H9 1805 aa28.62■■■□□ 2.17
CDK11A-220ENST00000492390 FHAD1B1AJZ9 1412 aa28.57■■■□□ 2.16
CDK11A-220ENST00000492390 WRNQ14191 1432 aaPredicted RBP eCLIP28.56■■■□□ 2.16
CDK11A-220ENST00000492390 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
CDK11A-220ENST00000492390 FAM69CQ0P6D2 419 aa28.47■■■□□ 2.15
CDK11A-220ENST00000492390 ABCC10Q5T3U5 1492 aa28.46■■■□□ 2.15
CDK11A-220ENST00000492390 JPH4Q96JJ6 628 aa28.44■■■□□ 2.14
CDK11A-220ENST00000492390 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
CDK11A-220ENST00000492390 NPM1P06748 294 aaKnown RBP eCLIP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 1020.6 ms