RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 SETD1AO15047 1707 aaKnown RBP12.25□□□□□ -0.45
APP-216ENST00000491395 NALCNQ8IZF0 1738 aa12.25□□□□□ -0.45
APP-216ENST00000491395 ADAMTS2O95450 1211 aa12.25□□□□□ -0.45
APP-216ENST00000491395 RXRBP28702 533 aa12.25□□□□□ -0.45
APP-216ENST00000491395 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
APP-216ENST00000491395 C14orf93Q9H972 538 aaKnown RBP12.25□□□□□ -0.45
APP-216ENST00000491395 PPLO60437 1756 aa12.25□□□□□ -0.45
APP-216ENST00000491395 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
APP-216ENST00000491395 TECPR2O15040 1411 aa12.23□□□□□ -0.45
APP-216ENST00000491395 PIK3C2GO75747 1445 aa12.23□□□□□ -0.45
APP-216ENST00000491395 FOXO3O43524 673 aa12.23□□□□□ -0.45
APP-216ENST00000491395 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
APP-216ENST00000491395 NGLY1Q96IV0 654 aa12.23□□□□□ -0.45
APP-216ENST00000491395 NHSL1Q5SYE7 1610 aa12.22□□□□□ -0.45
APP-216ENST00000491395 YTHDC2Q9H6S0 1430 aaKnown RBP12.22□□□□□ -0.45
APP-216ENST00000491395 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
APP-216ENST00000491395 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
APP-216ENST00000491395 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
APP-216ENST00000491395 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
APP-216ENST00000491395 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
APP-216ENST00000491395 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
APP-216ENST00000491395 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
APP-216ENST00000491395 NRXN1Q9ULB1 1477 aa12.19□□□□□ -0.46
APP-216ENST00000491395 HRCP23327 699 aa12.18□□□□□ -0.46
APP-216ENST00000491395 RBM6P78332 1123 aaKnown RBP12.18□□□□□ -0.46
APP-216ENST00000491395 PRAM1Q96QH2 718 aa12.18□□□□□ -0.46
APP-216ENST00000491395 CDC42BPGQ6DT37 1551 aa12.18□□□□□ -0.46
APP-216ENST00000491395 DCAF11Q8TEB1 546 aa12.17□□□□□ -0.46
APP-216ENST00000491395 POGKQ9P215 609 aa12.17□□□□□ -0.46
APP-216ENST00000491395 USP21Q9UK80 565 aa12.17□□□□□ -0.46
APP-216ENST00000491395 MYOM2P54296 1465 aa12.16□□□□□ -0.46
APP-216ENST00000491395 LAMC1P11047 1609 aa12.16□□□□□ -0.46
APP-216ENST00000491395 KRT28Q7Z3Y7 464 aa12.16□□□□□ -0.46
APP-216ENST00000491395 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
APP-216ENST00000491395 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
APP-216ENST00000491395 PXDNQ92626 1479 aa12.15□□□□□ -0.46
APP-216ENST00000491395 IFT172Q9UG01 1749 aa12.15□□□□□ -0.46
APP-216ENST00000491395 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
APP-216ENST00000491395 SPATA31A3Q5VYP0 1347 aa12.14□□□□□ -0.47
APP-216ENST00000491395 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
APP-216ENST00000491395 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
APP-216ENST00000491395 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
APP-216ENST00000491395 RGS12O14924 1447 aa12.12□□□□□ -0.47
APP-216ENST00000491395 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
APP-216ENST00000491395 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
APP-216ENST00000491395 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
APP-216ENST00000491395 PSME1Q06323 249 aa12.11□□□□□ -0.47
APP-216ENST00000491395 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
APP-216ENST00000491395 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
APP-216ENST00000491395 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
APP-216ENST00000491395 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
APP-216ENST00000491395 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
APP-216ENST00000491395 BCL9LQ86UU0 1499 aa12.09□□□□□ -0.47
APP-216ENST00000491395 DLC1Q96QB1 1528 aa12.09□□□□□ -0.47
APP-216ENST00000491395 ATRNO75882 1429 aa12.09□□□□□ -0.47
APP-216ENST00000491395 FMN2Q9NZ56 1722 aa12.08□□□□□ -0.47
APP-216ENST00000491395 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
APP-216ENST00000491395 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
APP-216ENST00000491395 HAP1P54257 671 aaPredicted RBP12.08□□□□□ -0.48
APP-216ENST00000491395 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
APP-216ENST00000491395 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
APP-216ENST00000491395 UNC5CLQ8IV45 518 aa12.07□□□□□ -0.48
APP-216ENST00000491395 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
APP-216ENST00000491395 TNS3Q68CZ2 1445 aa12.06□□□□□ -0.48
APP-216ENST00000491395 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
APP-216ENST00000491395 FAM83GA6ND36 823 aa12.04□□□□□ -0.48
APP-216ENST00000491395 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
APP-216ENST00000491395 NGDNQ8NEJ9 315 aaKnown RBP12.04□□□□□ -0.48
APP-216ENST00000491395 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
APP-216ENST00000491395 GPRASP1Q5JY77 1395 aa12.04□□□□□ -0.48
APP-216ENST00000491395 ATAD2Q6PL18 1390 aa12.04□□□□□ -0.48
APP-216ENST00000491395 KIF1AQ12756 1690 aa12.03□□□□□ -0.48
APP-216ENST00000491395 SLIT2O94813 1529 aa12.03□□□□□ -0.48
APP-216ENST00000491395 NUDT16Q96DE0 195 aaKnown RBP12.03□□□□□ -0.48
APP-216ENST00000491395 CDK19Q9BWU1 502 aa12.03□□□□□ -0.48
APP-216ENST00000491395 EIF3AQ14152 1382 aaKnown RBP12.03□□□□□ -0.48
APP-216ENST00000491395 VPS72Q15906 364 aa12.02□□□□□ -0.49
APP-216ENST00000491395 RALGAPBQ86X10 1494 aa12.02□□□□□ -0.49
APP-216ENST00000491395 USP32Q8NFA0 1604 aa12.01□□□□□ -0.49
APP-216ENST00000491395 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
APP-216ENST00000491395 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
APP-216ENST00000491395 SEPT12Q8IYM1 358 aa12□□□□□ -0.49
APP-216ENST00000491395 CCDC9Q9Y3X0 531 aaKnown RBP12□□□□□ -0.49
APP-216ENST00000491395 TULP4Q9NRJ4 1543 aa12□□□□□ -0.49
APP-216ENST00000491395 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
APP-216ENST00000491395 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
APP-216ENST00000491395 SIN3AQ96ST3 1273 aa11.99□□□□□ -0.49
APP-216ENST00000491395 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
APP-216ENST00000491395 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
APP-216ENST00000491395 NBPF8Q3BBV2 869 aa11.97□□□□□ -0.49
APP-216ENST00000491395 NUTM2GQ5VZR2 741 aa11.97□□□□□ -0.49
APP-216ENST00000491395 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
APP-216ENST00000491395 GLI3P10071 1580 aa11.96□□□□□ -0.49
APP-216ENST00000491395 ATP7BP35670 1465 aa11.96□□□□□ -0.49
APP-216ENST00000491395 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
APP-216ENST00000491395 NEUROD1Q13562 356 aa11.96□□□□□ -0.49
APP-216ENST00000491395 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
APP-216ENST00000491395 MARF1Q9Y4F3 1742 aaKnown RBP11.95□□□□□ -0.5
APP-216ENST00000491395 ACEP12821 1306 aa11.95□□□□□ -0.5
APP-216ENST00000491395 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms