RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 POLR1AO95602 1720 aaPredicted RBP15.99■□□□□ 0.15
CMSS1-205ENST00000489081 POGKQ9P215 609 aa15.99■□□□□ 0.15
CMSS1-205ENST00000489081 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
CMSS1-205ENST00000489081 CPS1P31327 1500 aa15.99■□□□□ 0.15
CMSS1-205ENST00000489081 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
CMSS1-205ENST00000489081 AMOTL2Q9Y2J4 779 aa15.98■□□□□ 0.15
CMSS1-205ENST00000489081 QRICH2Q9H0J4 1663 aa15.98■□□□□ 0.15
CMSS1-205ENST00000489081 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
CMSS1-205ENST00000489081 PLEKHH1Q9ULM0 1364 aa15.98■□□□□ 0.15
CMSS1-205ENST00000489081 SAFB2Q14151 953 aaKnown RBP eCLIP15.97■□□□□ 0.15
CMSS1-205ENST00000489081 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
CMSS1-205ENST00000489081 WAPLQ7Z5K2 1190 aa15.97■□□□□ 0.15
CMSS1-205ENST00000489081 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
CMSS1-205ENST00000489081 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
CMSS1-205ENST00000489081 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
CMSS1-205ENST00000489081 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
CMSS1-205ENST00000489081 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
CMSS1-205ENST00000489081 KCNA6P17658 529 aa15.93■□□□□ 0.14
CMSS1-205ENST00000489081 PUS7Q96PZ0 661 aaKnown RBP15.93■□□□□ 0.14
CMSS1-205ENST00000489081 STRCQ7RTU9 1775 aa15.89■□□□□ 0.13
CMSS1-205ENST00000489081 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
CMSS1-205ENST00000489081 NWD1Q149M9 1564 aa15.88■□□□□ 0.13
CMSS1-205ENST00000489081 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
CMSS1-205ENST00000489081 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
CMSS1-205ENST00000489081 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
CMSS1-205ENST00000489081 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
CMSS1-205ENST00000489081 ADGRB2O60241 1585 aa15.86■□□□□ 0.13
CMSS1-205ENST00000489081 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
CMSS1-205ENST00000489081 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
CMSS1-205ENST00000489081 PANK3Q9H999 370 aa15.85■□□□□ 0.13
CMSS1-205ENST00000489081 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
CMSS1-205ENST00000489081 MYOM1P52179 1685 aa15.83■□□□□ 0.13
CMSS1-205ENST00000489081 MIER1Q8N108 512 aa15.83■□□□□ 0.12
CMSS1-205ENST00000489081 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
CMSS1-205ENST00000489081 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
CMSS1-205ENST00000489081 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
CMSS1-205ENST00000489081 TMC1Q8TDI8 760 aa15.81■□□□□ 0.12
CMSS1-205ENST00000489081 ANP32CO43423 234 aa15.8■□□□□ 0.12
CMSS1-205ENST00000489081 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
CMSS1-205ENST00000489081 ADGRL3Q9HAR2 1447 aa15.79■□□□□ 0.12
CMSS1-205ENST00000489081 PRR36Q9H6K5 1346 aa15.79■□□□□ 0.12
CMSS1-205ENST00000489081 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
CMSS1-205ENST00000489081 RBM33Q96EV2 1170 aaKnown RBP15.79■□□□□ 0.12
CMSS1-205ENST00000489081 ATP7BP35670 1465 aa15.78■□□□□ 0.12
CMSS1-205ENST00000489081 ANKRD36BQ8N2N9 1353 aa15.77■□□□□ 0.12
CMSS1-205ENST00000489081 CARD14Q9BXL6 1004 aa15.77■□□□□ 0.12
CMSS1-205ENST00000489081 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
CMSS1-205ENST00000489081 CABP1Q9NZU7 370 aa15.77■□□□□ 0.12
CMSS1-205ENST00000489081 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
CMSS1-205ENST00000489081 STRCP1A6NGW2 1772 aa15.77■□□□□ 0.11
CMSS1-205ENST00000489081 NCOA3Q9Y6Q9 1424 aa15.77■□□□□ 0.11
CMSS1-205ENST00000489081 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
CMSS1-205ENST00000489081 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
CMSS1-205ENST00000489081 NALCNQ8IZF0 1738 aa15.76■□□□□ 0.11
CMSS1-205ENST00000489081 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
CMSS1-205ENST00000489081 PRKRIP1Q9H875 184 aaPredicted RBP15.75■□□□□ 0.11
CMSS1-205ENST00000489081 KNSTRNQ9Y448 316 aa15.75■□□□□ 0.11
CMSS1-205ENST00000489081 CD163L1Q9NR16 1453 aa15.75■□□□□ 0.11
CMSS1-205ENST00000489081 PPIP5K1Q6PFW1 1433 aa15.75■□□□□ 0.11
CMSS1-205ENST00000489081 ANKARQ7Z5J8 1434 aa15.75■□□□□ 0.11
CMSS1-205ENST00000489081 C14orf37Q86TY3 774 aa15.74■□□□□ 0.11
CMSS1-205ENST00000489081 TERF2IPQ9NYB0 399 aa15.74■□□□□ 0.11
CMSS1-205ENST00000489081 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
CMSS1-205ENST00000489081 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
CMSS1-205ENST00000489081 AMER1Q5JTC6 1135 aaPredicted RBP15.73■□□□□ 0.11
CMSS1-205ENST00000489081 NPC1L1Q9UHC9 1359 aa15.73■□□□□ 0.11
CMSS1-205ENST00000489081 NSD3Q9BZ95 1437 aa15.72■□□□□ 0.11
CMSS1-205ENST00000489081 PLEKHG3A1L390 1219 aa15.72■□□□□ 0.11
CMSS1-205ENST00000489081 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
CMSS1-205ENST00000489081 C19orf44Q9H6X5 657 aa15.72■□□□□ 0.11
CMSS1-205ENST00000489081 USP32Q8NFA0 1604 aa15.72■□□□□ 0.11
CMSS1-205ENST00000489081 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.11
CMSS1-205ENST00000489081 CPSF1Q10570 1443 aaKnown RBP15.71■□□□□ 0.11
CMSS1-205ENST00000489081 LRRC7Q96NW7 1537 aa15.71■□□□□ 0.11
CMSS1-205ENST00000489081 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
CMSS1-205ENST00000489081 TOPAZ1Q8N9V7 1692 aa15.7■□□□□ 0.1
CMSS1-205ENST00000489081 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
CMSS1-205ENST00000489081 CNGB1Q14028 1251 aaPredicted RBP15.7■□□□□ 0.1
CMSS1-205ENST00000489081 DCCP43146 1447 aa15.69■□□□□ 0.1
CMSS1-205ENST00000489081 RALBP1Q15311 655 aa15.69■□□□□ 0.1
CMSS1-205ENST00000489081 CC2D1BQ5T0F9 858 aaKnown RBP15.69■□□□□ 0.1
CMSS1-205ENST00000489081 PARD3Q8TEW0 1356 aa15.69■□□□□ 0.1
CMSS1-205ENST00000489081 CCER2I3L3R5 266 aa15.68■□□□□ 0.1
CMSS1-205ENST00000489081 ACEP12821 1306 aa15.68■□□□□ 0.1
CMSS1-205ENST00000489081 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
CMSS1-205ENST00000489081 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
CMSS1-205ENST00000489081 POLR3AO14802 1390 aaPredicted RBP15.66■□□□□ 0.1
CMSS1-205ENST00000489081 MSH6P52701 1360 aa15.66■□□□□ 0.1
CMSS1-205ENST00000489081 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
CMSS1-205ENST00000489081 ATF3P18847 181 aa15.65■□□□□ 0.1
CMSS1-205ENST00000489081 PMFBP1Q8TBY8 1022 aa15.65■□□□□ 0.1
CMSS1-205ENST00000489081 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
CMSS1-205ENST00000489081 NSD2O96028 1365 aa15.64■□□□□ 0.09
CMSS1-205ENST00000489081 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
CMSS1-205ENST00000489081 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
CMSS1-205ENST00000489081 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
CMSS1-205ENST00000489081 MYBBP1AQ9BQG0 1328 aaKnown RBP15.64■□□□□ 0.09
CMSS1-205ENST00000489081 USP6P35125 1406 aa15.63■□□□□ 0.09
CMSS1-205ENST00000489081 MST1RQ04912 1400 aa15.63■□□□□ 0.09
CMSS1-205ENST00000489081 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms