RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 GPRASP1Q5JY77 1395 aa24.87■■□□□ 1.57
COL16A1-215ENST00000488897 POLR3GLQ9BT43 218 aa24.87■■□□□ 1.57
COL16A1-215ENST00000488897 DMRT2Q9Y5R5 561 aa24.86■■□□□ 1.57
COL16A1-215ENST00000488897 LRPPRCP42704 1394 aaKnown RBP24.86■■□□□ 1.57
COL16A1-215ENST00000488897 KIF7Q2M1P5 1343 aa24.85■■□□□ 1.57
COL16A1-215ENST00000488897 CCDC184Q52MB2 194 aa24.85■■□□□ 1.57
COL16A1-215ENST00000488897 CHD2O14647 1828 aaKnown RBP24.84■■□□□ 1.57
COL16A1-215ENST00000488897 C14orf37Q86TY3 774 aa24.84■■□□□ 1.57
COL16A1-215ENST00000488897 KIAA1210Q9ULL0 1709 aa24.84■■□□□ 1.57
COL16A1-215ENST00000488897 MRS2Q9HD23 443 aa24.83■■□□□ 1.57
COL16A1-215ENST00000488897 LAMC1P11047 1609 aa24.82■■□□□ 1.56
COL16A1-215ENST00000488897 ABCC11Q96J66 1382 aa24.82■■□□□ 1.56
COL16A1-215ENST00000488897 CENPJQ9HC77 1338 aaPredicted RBP24.8■■□□□ 1.56
COL16A1-215ENST00000488897 ZBED9Q6R2W3 1325 aa24.8■■□□□ 1.56
COL16A1-215ENST00000488897 FAM9BQ8IZU0 186 aa24.8■■□□□ 1.56
COL16A1-215ENST00000488897 TESK2Q96S53 571 aa24.79■■□□□ 1.56
COL16A1-215ENST00000488897 DIP2AQ14689 1571 aa24.78■■□□□ 1.56
COL16A1-215ENST00000488897 ARHGEF28Q8N1W1 1705 aaKnown RBP24.78■■□□□ 1.56
COL16A1-215ENST00000488897 TMEM94Q12767 1356 aa24.78■■□□□ 1.56
COL16A1-215ENST00000488897 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
COL16A1-215ENST00000488897 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
COL16A1-215ENST00000488897 PIK3R4Q99570 1358 aa24.74■■□□□ 1.55
COL16A1-215ENST00000488897 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.74■■□□□ 1.55
COL16A1-215ENST00000488897 IRX6P78412 446 aaPredicted RBP24.74■■□□□ 1.55
COL16A1-215ENST00000488897 DISP3Q9P2K9 1392 aa24.74■■□□□ 1.55
COL16A1-215ENST00000488897 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
COL16A1-215ENST00000488897 TECPR2O15040 1411 aa24.7■■□□□ 1.54
COL16A1-215ENST00000488897 LRRC7Q96NW7 1537 aa24.7■■□□□ 1.54
COL16A1-215ENST00000488897 CDK19Q9BWU1 502 aa24.7■■□□□ 1.54
COL16A1-215ENST00000488897 QRICH2Q9H0J4 1663 aa24.69■■□□□ 1.54
COL16A1-215ENST00000488897 CPS1P31327 1500 aa24.69■■□□□ 1.54
COL16A1-215ENST00000488897 SRPK2P78362 688 aaKnown RBP24.69■■□□□ 1.54
COL16A1-215ENST00000488897 EIF3AQ14152 1382 aaKnown RBP24.68■■□□□ 1.54
COL16A1-215ENST00000488897 NWD1Q149M9 1564 aa24.67■■□□□ 1.54
COL16A1-215ENST00000488897 PTCH1Q13635 1447 aa24.66■■□□□ 1.54
COL16A1-215ENST00000488897 LTBP4Q8N2S1 1624 aa24.66■■□□□ 1.54
COL16A1-215ENST00000488897 XIRP1Q702N8 1843 aaKnown RBP24.65■■□□□ 1.54
COL16A1-215ENST00000488897 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.54
COL16A1-215ENST00000488897 FAM135BQ49AJ0 1406 aa24.64■■□□□ 1.54
COL16A1-215ENST00000488897 NALCNQ8IZF0 1738 aa24.64■■□□□ 1.53
COL16A1-215ENST00000488897 CNGB1Q14028 1251 aaPredicted RBP24.64■■□□□ 1.53
COL16A1-215ENST00000488897 DLC1Q96QB1 1528 aa24.63■■□□□ 1.53
COL16A1-215ENST00000488897 WASLO00401 505 aaPredicted RBP24.63■■□□□ 1.53
COL16A1-215ENST00000488897 TULP4Q9NRJ4 1543 aa24.62■■□□□ 1.53
COL16A1-215ENST00000488897 PRR36Q9H6K5 1346 aa24.62■■□□□ 1.53
COL16A1-215ENST00000488897 DDX17Q92841 729 aaKnown RBP24.62■■□□□ 1.53
COL16A1-215ENST00000488897 SIRT1Q96EB6 747 aa24.62■■□□□ 1.53
COL16A1-215ENST00000488897 PMFBP1Q8TBY8 1022 aa24.61■■□□□ 1.53
COL16A1-215ENST00000488897 TMC1Q8TDI8 760 aa24.61■■□□□ 1.53
COL16A1-215ENST00000488897 TMF1P82094 1093 aa24.61■■□□□ 1.53
COL16A1-215ENST00000488897 ORAI2Q96SN7 254 aa24.61■■□□□ 1.53
COL16A1-215ENST00000488897 C19orf44Q9H6X5 657 aa24.61■■□□□ 1.53
COL16A1-215ENST00000488897 FANCIQ9NVI1 1328 aa24.6■■□□□ 1.53
COL16A1-215ENST00000488897 NKTRP30414 1462 aaKnown RBP24.6■■□□□ 1.53
COL16A1-215ENST00000488897 SLC12A5Q9H2X9 1139 aa24.59■■□□□ 1.53
COL16A1-215ENST00000488897 EVC2Q86UK5 1308 aa24.57■■□□□ 1.52
COL16A1-215ENST00000488897 ATF3P18847 181 aa24.57■■□□□ 1.52
COL16A1-215ENST00000488897 PIP4K2BP78356 416 aa24.56■■□□□ 1.52
COL16A1-215ENST00000488897 NUDT16Q96DE0 195 aaKnown RBP24.56■■□□□ 1.52
COL16A1-215ENST00000488897 CABP1Q9NZU7 370 aa24.56■■□□□ 1.52
COL16A1-215ENST00000488897 ADGRL3Q9HAR2 1447 aa24.56■■□□□ 1.52
COL16A1-215ENST00000488897 RGPD8O14715 1765 aaPredicted RBP24.56■■□□□ 1.52
COL16A1-215ENST00000488897 XPCQ01831 940 aaPredicted RBP24.56■■□□□ 1.52
COL16A1-215ENST00000488897 SMG6Q86US8 1419 aaKnown RBP24.56■■□□□ 1.52
COL16A1-215ENST00000488897 ESCO1Q5FWF5 840 aa24.55■■□□□ 1.52
COL16A1-215ENST00000488897 MSH6P52701 1360 aa24.54■■□□□ 1.52
COL16A1-215ENST00000488897 PLEKHG5O94827 1062 aa24.53■■□□□ 1.52
COL16A1-215ENST00000488897 CERKQ8TCT0 537 aa24.53■■□□□ 1.52
COL16A1-215ENST00000488897 SLAIN2Q9P270 581 aa24.5■■□□□ 1.51
COL16A1-215ENST00000488897 NUDCQ9Y266 331 aa24.5■■□□□ 1.51
COL16A1-215ENST00000488897 UBAP1LF5GYI3 381 aa24.49■■□□□ 1.51
COL16A1-215ENST00000488897 FOXO3O43524 673 aa24.49■■□□□ 1.51
COL16A1-215ENST00000488897 B4GALNT3Q6L9W6 998 aa24.47■■□□□ 1.51
COL16A1-215ENST00000488897 SBNO2Q9Y2G9 1366 aa24.47■■□□□ 1.51
COL16A1-215ENST00000488897 MSH5O43196 834 aa24.47■■□□□ 1.51
COL16A1-215ENST00000488897 USP32Q8NFA0 1604 aa24.47■■□□□ 1.51
COL16A1-215ENST00000488897 KTN1Q86UP2 1357 aaKnown RBP24.46■■□□□ 1.51
COL16A1-215ENST00000488897 CADPS2Q86UW7 1296 aa24.46■■□□□ 1.51
COL16A1-215ENST00000488897 PNISRQ8TF01 805 aaKnown RBP24.46■■□□□ 1.51
COL16A1-215ENST00000488897 CCDC61Q9Y6R9 512 aa24.45■■□□□ 1.5
COL16A1-215ENST00000488897 ATP7BP35670 1465 aa24.45■■□□□ 1.5
COL16A1-215ENST00000488897 PPIP5K1Q6PFW1 1433 aa24.44■■□□□ 1.5
COL16A1-215ENST00000488897 MST1RQ04912 1400 aa24.44■■□□□ 1.5
COL16A1-215ENST00000488897 PANK3Q9H999 370 aa24.44■■□□□ 1.5
COL16A1-215ENST00000488897 RNF123Q5XPI4 1314 aa24.44■■□□□ 1.5
COL16A1-215ENST00000488897 C1orf167Q5SNV9 1468 aa24.42■■□□□ 1.5
COL16A1-215ENST00000488897 BRINP3Q76B58 766 aa24.42■■□□□ 1.5
COL16A1-215ENST00000488897 ACEP12821 1306 aa24.42■■□□□ 1.5
COL16A1-215ENST00000488897 RALBP1Q15311 655 aa24.41■■□□□ 1.5
COL16A1-215ENST00000488897 NGDNQ8NEJ9 315 aaKnown RBP24.41■■□□□ 1.5
COL16A1-215ENST00000488897 ADGRB2O60241 1585 aa24.41■■□□□ 1.5
COL16A1-215ENST00000488897 FMN2Q9NZ56 1722 aa24.41■■□□□ 1.5
COL16A1-215ENST00000488897 CDC42BPGQ6DT37 1551 aa24.4■■□□□ 1.5
COL16A1-215ENST00000488897 CARD14Q9BXL6 1004 aa24.4■■□□□ 1.5
COL16A1-215ENST00000488897 PHF8Q9UPP1 1060 aa24.4■■□□□ 1.5
COL16A1-215ENST00000488897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.4■■□□□ 1.5
COL16A1-215ENST00000488897 BRD4O60885 1362 aaPredicted RBP24.39■■□□□ 1.5
COL16A1-215ENST00000488897 NUTM2GQ5VZR2 741 aa24.39■■□□□ 1.5
COL16A1-215ENST00000488897 MYBBP1AQ9BQG0 1328 aaKnown RBP24.38■■□□□ 1.49
COL16A1-215ENST00000488897 NCOA3Q9Y6Q9 1424 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms