RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 SAFB2Q14151 953 aaKnown RBP eCLIP11.13□□□□□ -0.63
RBM28-206ENST00000487602 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
RBM28-206ENST00000487602 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
RBM28-206ENST00000487602 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
RBM28-206ENST00000487602 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
RBM28-206ENST00000487602 KCNA6P17658 529 aa11.12□□□□□ -0.63
RBM28-206ENST00000487602 POTEDQ86YR6 584 aa11.12□□□□□ -0.63
RBM28-206ENST00000487602 POLR3GLQ9BT43 218 aa11.12□□□□□ -0.63
RBM28-206ENST00000487602 PLEKHH1Q9ULM0 1364 aa11.12□□□□□ -0.63
RBM28-206ENST00000487602 CPS1P31327 1500 aa11.11□□□□□ -0.63
RBM28-206ENST00000487602 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
RBM28-206ENST00000487602 ROBO2Q9HCK4 1378 aa11.11□□□□□ -0.63
RBM28-206ENST00000487602 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
RBM28-206ENST00000487602 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
RBM28-206ENST00000487602 CHD2O14647 1828 aaKnown RBP11.1□□□□□ -0.63
RBM28-206ENST00000487602 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
RBM28-206ENST00000487602 PTCH1Q13635 1447 aa11.09□□□□□ -0.63
RBM28-206ENST00000487602 KCNA4P22459 653 aa11.08□□□□□ -0.64
RBM28-206ENST00000487602 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
RBM28-206ENST00000487602 CDK19Q9BWU1 502 aa11.07□□□□□ -0.64
RBM28-206ENST00000487602 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
RBM28-206ENST00000487602 STRCP1A6NGW2 1772 aa11.06□□□□□ -0.64
RBM28-206ENST00000487602 WASLO00401 505 aaPredicted RBP11.06□□□□□ -0.64
RBM28-206ENST00000487602 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
RBM28-206ENST00000487602 TULP4Q9NRJ4 1543 aa11.05□□□□□ -0.64
RBM28-206ENST00000487602 SRPK2P78362 688 aaKnown RBP11.05□□□□□ -0.64
RBM28-206ENST00000487602 PROSER2Q86WR7 435 aaPredicted RBP11.04□□□□□ -0.64
RBM28-206ENST00000487602 PANK3Q9H999 370 aa11.04□□□□□ -0.64
RBM28-206ENST00000487602 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
RBM28-206ENST00000487602 ADGRB2O60241 1585 aa11.03□□□□□ -0.64
RBM28-206ENST00000487602 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
RBM28-206ENST00000487602 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.02□□□□□ -0.65
RBM28-206ENST00000487602 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
RBM28-206ENST00000487602 TMC1Q8TDI8 760 aa11.02□□□□□ -0.65
RBM28-206ENST00000487602 SLC12A5Q9H2X9 1139 aa11.02□□□□□ -0.65
RBM28-206ENST00000487602 PER1O15534 1290 aaPredicted RBP11.01□□□□□ -0.65
RBM28-206ENST00000487602 NUDT16Q96DE0 195 aaKnown RBP11.01□□□□□ -0.65
RBM28-206ENST00000487602 RBM33Q96EV2 1170 aaKnown RBP11.01□□□□□ -0.65
RBM28-206ENST00000487602 XIRP1Q702N8 1843 aaKnown RBP11□□□□□ -0.65
RBM28-206ENST00000487602 ZNF335Q9H4Z2 1342 aaPredicted RBP11□□□□□ -0.65
RBM28-206ENST00000487602 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
RBM28-206ENST00000487602 NCOA3Q9Y6Q9 1424 aa11□□□□□ -0.65
RBM28-206ENST00000487602 C14orf37Q86TY3 774 aa10.99□□□□□ -0.65
RBM28-206ENST00000487602 MIER1Q8N108 512 aa10.99□□□□□ -0.65
RBM28-206ENST00000487602 CABP1Q9NZU7 370 aa10.99□□□□□ -0.65
RBM28-206ENST00000487602 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
RBM28-206ENST00000487602 PRR36Q9H6K5 1346 aa10.99□□□□□ -0.65
RBM28-206ENST00000487602 ADGRL3Q9HAR2 1447 aa10.99□□□□□ -0.65
RBM28-206ENST00000487602 CDC42BPGQ6DT37 1551 aa10.99□□□□□ -0.65
RBM28-206ENST00000487602 ANP32CO43423 234 aa10.98□□□□□ -0.65
RBM28-206ENST00000487602 C19orf44Q9H6X5 657 aa10.98□□□□□ -0.65
RBM28-206ENST00000487602 TMEM94Q12767 1356 aa10.98□□□□□ -0.65
RBM28-206ENST00000487602 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
RBM28-206ENST00000487602 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
RBM28-206ENST00000487602 TERF2IPQ9NYB0 399 aa10.97□□□□□ -0.65
RBM28-206ENST00000487602 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
RBM28-206ENST00000487602 LTBP4Q8N2S1 1624 aa10.97□□□□□ -0.65
RBM28-206ENST00000487602 FMN2Q9NZ56 1722 aa10.96□□□□□ -0.65
RBM28-206ENST00000487602 MYOM1P52179 1685 aa10.96□□□□□ -0.65
RBM28-206ENST00000487602 ATP7BP35670 1465 aa10.96□□□□□ -0.65
RBM28-206ENST00000487602 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.65
RBM28-206ENST00000487602 NUTM2FA1L443 756 aa10.96□□□□□ -0.65
RBM28-206ENST00000487602 HDGFL2Q7Z4V5 671 aaPredicted RBP10.96□□□□□ -0.65
RBM28-206ENST00000487602 ITSN1Q15811 1721 aa10.95□□□□□ -0.66
RBM28-206ENST00000487602 PPIP5K1Q6PFW1 1433 aa10.95□□□□□ -0.66
RBM28-206ENST00000487602 ANKARQ7Z5J8 1434 aa10.95□□□□□ -0.66
RBM28-206ENST00000487602 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
RBM28-206ENST00000487602 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
RBM28-206ENST00000487602 TOPAZ1Q8N9V7 1692 aa10.95□□□□□ -0.66
RBM28-206ENST00000487602 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
RBM28-206ENST00000487602 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
RBM28-206ENST00000487602 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
RBM28-206ENST00000487602 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
RBM28-206ENST00000487602 A0A1W2PP64 1363 aa10.93□□□□□ -0.66
RBM28-206ENST00000487602 NPC1L1Q9UHC9 1359 aa10.93□□□□□ -0.66
RBM28-206ENST00000487602 ATF3P18847 181 aa10.93□□□□□ -0.66
RBM28-206ENST00000487602 CPSF1Q10570 1443 aaKnown RBP10.92□□□□□ -0.66
RBM28-206ENST00000487602 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
RBM28-206ENST00000487602 ACEP12821 1306 aa10.92□□□□□ -0.66
RBM28-206ENST00000487602 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
RBM28-206ENST00000487602 RALBP1Q15311 655 aa10.92□□□□□ -0.66
RBM28-206ENST00000487602 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
RBM28-206ENST00000487602 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
RBM28-206ENST00000487602 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
RBM28-206ENST00000487602 DCCP43146 1447 aa10.92□□□□□ -0.66
RBM28-206ENST00000487602 MSH6P52701 1360 aa10.91□□□□□ -0.66
RBM28-206ENST00000487602 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
RBM28-206ENST00000487602 USP32Q8NFA0 1604 aa10.91□□□□□ -0.66
RBM28-206ENST00000487602 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
RBM28-206ENST00000487602 CCER2I3L3R5 266 aa10.91□□□□□ -0.66
RBM28-206ENST00000487602 CNGB1Q14028 1251 aaPredicted RBP10.91□□□□□ -0.66
RBM28-206ENST00000487602 NGDNQ8NEJ9 315 aaKnown RBP10.91□□□□□ -0.66
RBM28-206ENST00000487602 RNF216Q9NWF9 866 aaPredicted RBP10.91□□□□□ -0.66
RBM28-206ENST00000487602 PHF8Q9UPP1 1060 aa10.91□□□□□ -0.66
RBM28-206ENST00000487602 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.66
RBM28-206ENST00000487602 IQSEC2Q5JU85 1478 aa10.9□□□□□ -0.66
RBM28-206ENST00000487602 ESCO1Q5FWF5 840 aa10.9□□□□□ -0.66
RBM28-206ENST00000487602 C1orf167Q5SNV9 1468 aa10.89□□□□□ -0.67
RBM28-206ENST00000487602 FYB1O15117 783 aa10.89□□□□□ -0.67
RBM28-206ENST00000487602 ORAI2Q96SN7 254 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms