RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 NPHP3Q7Z494 1330 aa39.32■■■■□ 3.88
RCC1-212ENST00000486790 NGLY1Q96IV0 654 aa39.31■■■■□ 3.88
RCC1-212ENST00000486790 ESCO1Q5FWF5 840 aa39.3■■■■□ 3.88
RCC1-212ENST00000486790 STK26Q9P289 416 aa39.3■■■■□ 3.88
RCC1-212ENST00000486790 IFT172Q9UG01 1749 aa39.3■■■■□ 3.88
RCC1-212ENST00000486790 LRPPRCP42704 1394 aaKnown RBP39.29■■■■□ 3.88
RCC1-212ENST00000486790 QTRT2Q9H974 415 aaKnown RBP39.28■■■■□ 3.88
RCC1-212ENST00000486790 TECPR2O15040 1411 aa39.28■■■■□ 3.88
RCC1-212ENST00000486790 ADAMTS2O95450 1211 aa39.27■■■■□ 3.88
RCC1-212ENST00000486790 RBM6P78332 1123 aaKnown RBP39.27■■■■□ 3.88
RCC1-212ENST00000486790 ABCC11Q96J66 1382 aa39.26■■■■□ 3.88
RCC1-212ENST00000486790 PIK3C2GO75747 1445 aa39.23■■■■□ 3.87
RCC1-212ENST00000486790 UPF1Q92900 1129 aaKnown RBP eCLIP39.23■■■■□ 3.87
RCC1-212ENST00000486790 KNDC1Q76NI1 1749 aa39.22■■■■□ 3.87
RCC1-212ENST00000486790 WAPLQ7Z5K2 1190 aa39.19■■■■□ 3.86
RCC1-212ENST00000486790 TMEM132EQ6IEE7 984 aa39.18■■■■□ 3.86
RCC1-212ENST00000486790 SIRT1Q96EB6 747 aa39.16■■■■□ 3.86
RCC1-212ENST00000486790 YTHDC2Q9H6S0 1430 aaKnown RBP39.15■■■■□ 3.86
RCC1-212ENST00000486790 COL22A1Q8NFW1 1626 aaPredicted RBP39.15■■■■□ 3.86
RCC1-212ENST00000486790 USP21Q9UK80 565 aa39.15■■■■□ 3.86
RCC1-212ENST00000486790 FOXO3O43524 673 aa39.14■■■■□ 3.86
RCC1-212ENST00000486790 TRPC5Q9UL62 973 aaPredicted RBP39.13■■■■□ 3.85
RCC1-212ENST00000486790 DHX57Q6P158 1386 aaKnown RBP39.12■■■■□ 3.85
RCC1-212ENST00000486790 C14orf93Q9H972 538 aaKnown RBP39.12■■■■□ 3.85
RCC1-212ENST00000486790 NUTM2FA1L443 756 aa39.09■■■■□ 3.85
RCC1-212ENST00000486790 FNBP4Q8N3X1 1017 aaPredicted RBP39.08■■■■□ 3.85
RCC1-212ENST00000486790 MYOM2P54296 1465 aa39.08■■■■□ 3.85
RCC1-212ENST00000486790 PXDNQ92626 1479 aa39.08■■■■□ 3.85
RCC1-212ENST00000486790 KIF1AQ12756 1690 aa39.06■■■■□ 3.84
RCC1-212ENST00000486790 RGS12O14924 1447 aa39.06■■■■□ 3.84
RCC1-212ENST00000486790 FMN2Q9NZ56 1722 aa39.05■■■■□ 3.84
RCC1-212ENST00000486790 PLEKHH1Q9ULM0 1364 aa39.05■■■■□ 3.84
RCC1-212ENST00000486790 RAB3GAP2Q9H2M9 1393 aa39.04■■■■□ 3.84
RCC1-212ENST00000486790 NRXN1Q9ULB1 1477 aa39.04■■■■□ 3.84
RCC1-212ENST00000486790 XPCQ01831 940 aaPredicted RBP39.02■■■■□ 3.84
RCC1-212ENST00000486790 CFAP70Q5T0N1 1121 aa39■■■■□ 3.83
RCC1-212ENST00000486790 MARF1Q9Y4F3 1742 aaKnown RBP38.98■■■■□ 3.83
RCC1-212ENST00000486790 PSME1Q06323 249 aa38.98■■■■□ 3.83
RCC1-212ENST00000486790 ATAD2Q6PL18 1390 aa38.96■■■■□ 3.83
RCC1-212ENST00000486790 POGKQ9P215 609 aa38.96■■■■□ 3.83
RCC1-212ENST00000486790 KRT28Q7Z3Y7 464 aa38.94■■■■□ 3.82
RCC1-212ENST00000486790 ATRNO75882 1429 aa38.94■■■■□ 3.82
RCC1-212ENST00000486790 SPATA31A3Q5VYP0 1347 aa38.93■■■■□ 3.82
RCC1-212ENST00000486790 STAC3Q96MF2 364 aa38.93■■■■□ 3.82
RCC1-212ENST00000486790 PRAM1Q96QH2 718 aa38.93■■■■□ 3.82
RCC1-212ENST00000486790 PHF8Q9UPP1 1060 aa38.93■■■■□ 3.82
RCC1-212ENST00000486790 HAP1P54257 671 aaPredicted RBP38.9■■■■□ 3.82
RCC1-212ENST00000486790 DLC1Q96QB1 1528 aa38.89■■■■□ 3.82
RCC1-212ENST00000486790 SAFB2Q14151 953 aaKnown RBP eCLIP38.87■■■■□ 3.81
RCC1-212ENST00000486790 HRCP23327 699 aa38.86■■■■□ 3.81
RCC1-212ENST00000486790 RGPD8O14715 1765 aaPredicted RBP38.85■■■■□ 3.81
RCC1-212ENST00000486790 BCL9LQ86UU0 1499 aa38.85■■■■□ 3.81
RCC1-212ENST00000486790 EIF3AQ14152 1382 aaKnown RBP38.83■■■■□ 3.81
RCC1-212ENST00000486790 GJD4Q96KN9 370 aaPredicted RBP38.83■■■■□ 3.81
RCC1-212ENST00000486790 TNS3Q68CZ2 1445 aa38.82■■■■□ 3.81
RCC1-212ENST00000486790 ANKARQ7Z5J8 1434 aa38.82■■■■□ 3.81
RCC1-212ENST00000486790 UNC5CLQ8IV45 518 aa38.81■■■■□ 3.8
RCC1-212ENST00000486790 DCAF11Q8TEB1 546 aa38.81■■■■□ 3.8
RCC1-212ENST00000486790 SBNO1A3KN83 1393 aa38.81■■■■□ 3.8
RCC1-212ENST00000486790 ARHGEF10O15013 1369 aa38.81■■■■□ 3.8
RCC1-212ENST00000486790 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.8■■■■□ 3.8
RCC1-212ENST00000486790 KDM2AQ9Y2K7 1162 aa38.8■■■■□ 3.8
RCC1-212ENST00000486790 LMOD2Q6P5Q4 547 aa38.77■■■■□ 3.8
RCC1-212ENST00000486790 TRAK1Q9UPV9 953 aa38.77■■■■□ 3.8
RCC1-212ENST00000486790 CCDC125Q86Z20 511 aa38.76■■■■□ 3.8
RCC1-212ENST00000486790 USP32Q8NFA0 1604 aa38.76■■■■□ 3.8
RCC1-212ENST00000486790 ADGRB2O60241 1585 aa38.75■■■■□ 3.79
RCC1-212ENST00000486790 ADGRB1O14514 1584 aa38.74■■■■□ 3.79
RCC1-212ENST00000486790 SLIT2O94813 1529 aa38.73■■■■□ 3.79
RCC1-212ENST00000486790 GPRASP1Q5JY77 1395 aa38.7■■■■□ 3.79
RCC1-212ENST00000486790 PMFBP1Q8TBY8 1022 aa38.69■■■■□ 3.78
RCC1-212ENST00000486790 MINK1Q8N4C8 1332 aaPredicted RBP38.66■■■■□ 3.78
RCC1-212ENST00000486790 HIRIP3Q9BW71 556 aaPredicted RBP38.66■■■■□ 3.78
RCC1-212ENST00000486790 RALGAPBQ86X10 1494 aa38.65■■■■□ 3.78
RCC1-212ENST00000486790 CABLES1Q8TDN4 633 aa38.64■■■■□ 3.78
RCC1-212ENST00000486790 NWD2Q9ULI1 1742 aa38.63■■■■□ 3.78
RCC1-212ENST00000486790 WASLO00401 505 aaPredicted RBP38.63■■■■□ 3.77
RCC1-212ENST00000486790 EP400Q96L91 3159 aa38.62■■■■□ 3.77
RCC1-212ENST00000486790 PLEKHG5O94827 1062 aa38.62■■■■□ 3.77
RCC1-212ENST00000486790 TULP4Q9NRJ4 1543 aa38.62■■■■□ 3.77
RCC1-212ENST00000486790 VPS72Q15906 364 aa38.61■■■■□ 3.77
RCC1-212ENST00000486790 CCDC9Q9Y3X0 531 aaKnown RBP38.61■■■■□ 3.77
RCC1-212ENST00000486790 NGDNQ8NEJ9 315 aaKnown RBP38.59■■■■□ 3.77
RCC1-212ENST00000486790 GLI3P10071 1580 aa38.57■■■■□ 3.76
RCC1-212ENST00000486790 PLCH1Q4KWH8 1693 aa38.56■■■■□ 3.76
RCC1-212ENST00000486790 ABCA3Q99758 1704 aa38.56■■■■□ 3.76
RCC1-212ENST00000486790 ZRANB1Q9UGI0 708 aa38.56■■■■□ 3.76
RCC1-212ENST00000486790 ITSN1Q15811 1721 aa38.52■■■■□ 3.76
RCC1-212ENST00000486790 TRPM3Q9HCF6 1732 aaPredicted RBP38.52■■■■□ 3.76
RCC1-212ENST00000486790 SF3B2Q13435 895 aaKnown RBP38.51■■■■□ 3.76
RCC1-212ENST00000486790 SEPT12Q8IYM1 358 aa38.51■■■■□ 3.76
RCC1-212ENST00000486790 PAK3O75914 559 aaPredicted RBP38.5■■■■□ 3.75
RCC1-212ENST00000486790 ARHGEF28Q8N1W1 1705 aaKnown RBP38.49■■■■□ 3.75
RCC1-212ENST00000486790 PRR36Q9H6K5 1346 aa38.49■■■■□ 3.75
RCC1-212ENST00000486790 FAM83GA6ND36 823 aa38.49■■■■□ 3.75
RCC1-212ENST00000486790 BLMP54132 1417 aaPredicted RBP38.47■■■■□ 3.75
RCC1-212ENST00000486790 ALS2Q96Q42 1657 aa38.47■■■■□ 3.75
RCC1-212ENST00000486790 ONECUT3O60422 494 aaPredicted RBP38.46■■■■□ 3.75
RCC1-212ENST00000486790 A0A0G2JS52 829 aa38.44■■■■□ 3.74
RCC1-212ENST00000486790 MYT1Q01538 1121 aa38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms