RNA–Protein interactions for RNA: ENST00000486310.5

ARF4-204, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 1,601 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-204ENST00000486310 NCKAP5LQ9HCH0 1330 aa9.74□□□□□ -0.85
ARF4-204ENST00000486310 LMTK3Q96Q04 1460 aa9.74□□□□□ -0.85
ARF4-204ENST00000486310 FAM135BQ49AJ0 1406 aa9.74□□□□□ -0.85
ARF4-204ENST00000486310 PRAM1Q96QH2 718 aa9.74□□□□□ -0.85
ARF4-204ENST00000486310 CPS1P31327 1500 aa9.73□□□□□ -0.85
ARF4-204ENST00000486310 DISP3Q9P2K9 1392 aa9.73□□□□□ -0.85
ARF4-204ENST00000486310 EVC2Q86UK5 1308 aa9.72□□□□□ -0.85
ARF4-204ENST00000486310 HSPA2P54652 639 aa9.72□□□□□ -0.85
ARF4-204ENST00000486310 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
ARF4-204ENST00000486310 SAFB2Q14151 953 aaKnown RBP eCLIP9.71□□□□□ -0.85
ARF4-204ENST00000486310 PUS7Q96PZ0 661 aaKnown RBP9.71□□□□□ -0.85
ARF4-204ENST00000486310 CHD2O14647 1828 aaKnown RBP9.71□□□□□ -0.85
ARF4-204ENST00000486310 PTCH1Q13635 1447 aa9.71□□□□□ -0.86
ARF4-204ENST00000486310 XRN1Q8IZH2 1706 aaKnown RBP9.7□□□□□ -0.86
ARF4-204ENST00000486310 PTPRUQ92729 1446 aa9.7□□□□□ -0.86
ARF4-204ENST00000486310 WAPLQ7Z5K2 1190 aa9.7□□□□□ -0.86
ARF4-204ENST00000486310 MINK1Q8N4C8 1332 aaPredicted RBP9.69□□□□□ -0.86
ARF4-204ENST00000486310 ROBO2Q9HCK4 1378 aa9.69□□□□□ -0.86
ARF4-204ENST00000486310 PLEKHH1Q9ULM0 1364 aa9.68□□□□□ -0.86
ARF4-204ENST00000486310 KCNA6P17658 529 aa9.68□□□□□ -0.86
ARF4-204ENST00000486310 SRPK2P78362 688 aaKnown RBP9.68□□□□□ -0.86
ARF4-204ENST00000486310 STRCQ7RTU9 1775 aa9.68□□□□□ -0.86
ARF4-204ENST00000486310 TULP4Q9NRJ4 1543 aa9.68□□□□□ -0.86
ARF4-204ENST00000486310 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
ARF4-204ENST00000486310 NWD1Q149M9 1564 aa9.67□□□□□ -0.86
ARF4-204ENST00000486310 ANP32CO43423 234 aa9.67□□□□□ -0.86
ARF4-204ENST00000486310 CDK19Q9BWU1 502 aa9.67□□□□□ -0.86
ARF4-204ENST00000486310 NINLQ9Y2I6 1382 aa9.66□□□□□ -0.86
ARF4-204ENST00000486310 ADGRB2O60241 1585 aa9.66□□□□□ -0.86
ARF4-204ENST00000486310 WASLO00401 505 aaPredicted RBP9.66□□□□□ -0.86
ARF4-204ENST00000486310 TMC1Q8TDI8 760 aa9.65□□□□□ -0.86
ARF4-204ENST00000486310 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
ARF4-204ENST00000486310 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.65□□□□□ -0.86
ARF4-204ENST00000486310 MYOM1P52179 1685 aa9.65□□□□□ -0.87
ARF4-204ENST00000486310 NKTRP30414 1462 aaKnown RBP9.64□□□□□ -0.87
ARF4-204ENST00000486310 PANK3Q9H999 370 aa9.64□□□□□ -0.87
ARF4-204ENST00000486310 PROSER2Q86WR7 435 aaPredicted RBP9.63□□□□□ -0.87
ARF4-204ENST00000486310 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
ARF4-204ENST00000486310 MIER1Q8N108 512 aa9.62□□□□□ -0.87
ARF4-204ENST00000486310 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
ARF4-204ENST00000486310 NUDT16Q96DE0 195 aaKnown RBP9.61□□□□□ -0.87
ARF4-204ENST00000486310 SLC12A5Q9H2X9 1139 aa9.61□□□□□ -0.87
ARF4-204ENST00000486310 TERF2IPQ9NYB0 399 aa9.61□□□□□ -0.87
ARF4-204ENST00000486310 CCDC61Q9Y6R9 512 aa9.61□□□□□ -0.87
ARF4-204ENST00000486310 NCOA3Q9Y6Q9 1424 aa9.61□□□□□ -0.87
ARF4-204ENST00000486310 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
ARF4-204ENST00000486310 ITSN1Q15811 1721 aa9.6□□□□□ -0.87
ARF4-204ENST00000486310 CDC42BPGQ6DT37 1551 aa9.6□□□□□ -0.87
ARF4-204ENST00000486310 HDGFL2Q7Z4V5 671 aaPredicted RBP9.6□□□□□ -0.87
ARF4-204ENST00000486310 NALCNQ8IZF0 1738 aa9.6□□□□□ -0.87
ARF4-204ENST00000486310 ANKRD36BQ8N2N9 1353 aa9.6□□□□□ -0.87
ARF4-204ENST00000486310 ADGRL3Q9HAR2 1447 aa9.6□□□□□ -0.87
ARF4-204ENST00000486310 KTN1Q86UP2 1357 aaKnown RBP9.6□□□□□ -0.87
ARF4-204ENST00000486310 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
ARF4-204ENST00000486310 STRCP1A6NGW2 1772 aa9.59□□□□□ -0.87
ARF4-204ENST00000486310 ATP7BP35670 1465 aa9.59□□□□□ -0.87
ARF4-204ENST00000486310 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
ARF4-204ENST00000486310 ANKARQ7Z5J8 1434 aa9.59□□□□□ -0.87
ARF4-204ENST00000486310 FMN2Q9NZ56 1722 aa9.59□□□□□ -0.87
ARF4-204ENST00000486310 RALBP1Q15311 655 aa9.58□□□□□ -0.88
ARF4-204ENST00000486310 C19orf44Q9H6X5 657 aa9.58□□□□□ -0.88
ARF4-204ENST00000486310 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
ARF4-204ENST00000486310 TMEM94Q12767 1356 aa9.57□□□□□ -0.88
ARF4-204ENST00000486310 TOPAZ1Q8N9V7 1692 aa9.57□□□□□ -0.88
ARF4-204ENST00000486310 CCER2I3L3R5 266 aa9.57□□□□□ -0.88
ARF4-204ENST00000486310 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
ARF4-204ENST00000486310 ZNF692Q9BU19 519 aaPredicted RBP9.57□□□□□ -0.88
ARF4-204ENST00000486310 NSD3Q9BZ95 1437 aa9.57□□□□□ -0.88
ARF4-204ENST00000486310 A0A1W2PP64 1363 aa9.57□□□□□ -0.88
ARF4-204ENST00000486310 NPC1L1Q9UHC9 1359 aa9.57□□□□□ -0.88
ARF4-204ENST00000486310 ZNF335Q9H4Z2 1342 aaPredicted RBP9.57□□□□□ -0.88
ARF4-204ENST00000486310 PRR36Q9H6K5 1346 aa9.57□□□□□ -0.88
ARF4-204ENST00000486310 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
ARF4-204ENST00000486310 NUTM2FA1L443 756 aa9.56□□□□□ -0.88
ARF4-204ENST00000486310 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
ARF4-204ENST00000486310 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
ARF4-204ENST00000486310 ATF3P18847 181 aa9.56□□□□□ -0.88
ARF4-204ENST00000486310 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
ARF4-204ENST00000486310 CC2D1BQ5T0F9 858 aaKnown RBP9.56□□□□□ -0.88
ARF4-204ENST00000486310 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
ARF4-204ENST00000486310 DCCP43146 1447 aa9.55□□□□□ -0.88
ARF4-204ENST00000486310 RGPD8O14715 1765 aaPredicted RBP9.55□□□□□ -0.88
ARF4-204ENST00000486310 AKAP12Q02952 1782 aa9.55□□□□□ -0.88
ARF4-204ENST00000486310 MSH6P52701 1360 aa9.55□□□□□ -0.88
ARF4-204ENST00000486310 CD163L1Q9NR16 1453 aa9.55□□□□□ -0.88
ARF4-204ENST00000486310 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
ARF4-204ENST00000486310 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
ARF4-204ENST00000486310 CPSF1Q10570 1443 aaKnown RBP9.55□□□□□ -0.88
ARF4-204ENST00000486310 NSD2O96028 1365 aa9.55□□□□□ -0.88
ARF4-204ENST00000486310 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
ARF4-204ENST00000486310 NGDNQ8NEJ9 315 aaKnown RBP9.54□□□□□ -0.88
ARF4-204ENST00000486310 MON2Q7Z3U7 1717 aa9.54□□□□□ -0.88
ARF4-204ENST00000486310 PARD3Q8TEW0 1356 aa9.54□□□□□ -0.88
ARF4-204ENST00000486310 ACEP12821 1306 aa9.54□□□□□ -0.88
ARF4-204ENST00000486310 MYBBP1AQ9BQG0 1328 aaKnown RBP9.54□□□□□ -0.88
ARF4-204ENST00000486310 EDC4Q6P2E9 1401 aaKnown RBP9.53□□□□□ -0.88
ARF4-204ENST00000486310 XIRP1Q702N8 1843 aaKnown RBP9.53□□□□□ -0.88
ARF4-204ENST00000486310 PMFBP1Q8TBY8 1022 aa9.53□□□□□ -0.88
ARF4-204ENST00000486310 RNF216Q9NWF9 866 aaPredicted RBP9.53□□□□□ -0.88
ARF4-204ENST00000486310 PHF8Q9UPP1 1060 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms