RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
SND1-210ENST00000483503 STK26Q9P289 416 aa15.93■□□□□ 0.14
SND1-210ENST00000483503 TULP4Q9NRJ4 1543 aa15.93■□□□□ 0.14
SND1-210ENST00000483503 NLRP1Q9C000 1473 aa15.92■□□□□ 0.14
SND1-210ENST00000483503 NSD2O96028 1365 aa15.92■□□□□ 0.14
SND1-210ENST00000483503 NSD3Q9BZ95 1437 aa15.92■□□□□ 0.14
SND1-210ENST00000483503 ANKRD36BQ8N2N9 1353 aa15.91■□□□□ 0.14
SND1-210ENST00000483503 CGNL1Q0VF96 1302 aa15.91■□□□□ 0.14
SND1-210ENST00000483503 ABCC11Q96J66 1382 aa15.9■□□□□ 0.14
SND1-210ENST00000483503 SLC12A5Q9H2X9 1139 aa15.9■□□□□ 0.14
SND1-210ENST00000483503 PRAM1Q96QH2 718 aa15.89■□□□□ 0.13
SND1-210ENST00000483503 SRPK2P78362 688 aaKnown RBP15.88■□□□□ 0.13
SND1-210ENST00000483503 MORC1Q86VD1 984 aa15.88■□□□□ 0.13
SND1-210ENST00000483503 SIRT1Q96EB6 747 aa15.88■□□□□ 0.13
SND1-210ENST00000483503 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
SND1-210ENST00000483503 TERF2IPQ9NYB0 399 aa15.87■□□□□ 0.13
SND1-210ENST00000483503 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
SND1-210ENST00000483503 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
SND1-210ENST00000483503 UBR1Q8IWV7 1749 aa15.86■□□□□ 0.13
SND1-210ENST00000483503 CABP2Q9NPB3 220 aa15.86■□□□□ 0.13
SND1-210ENST00000483503 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
SND1-210ENST00000483503 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
SND1-210ENST00000483503 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
SND1-210ENST00000483503 ILDR2Q71H61 639 aa15.84■□□□□ 0.13
SND1-210ENST00000483503 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
SND1-210ENST00000483503 FAM135BQ49AJ0 1406 aa15.84■□□□□ 0.13
SND1-210ENST00000483503 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.13
SND1-210ENST00000483503 KNDC1Q76NI1 1749 aa15.83■□□□□ 0.13
SND1-210ENST00000483503 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
SND1-210ENST00000483503 BCANQ96GW7 911 aa15.83■□□□□ 0.12
SND1-210ENST00000483503 RNF123Q5XPI4 1314 aa15.83■□□□□ 0.12
SND1-210ENST00000483503 TECPR2O15040 1411 aa15.83■□□□□ 0.12
SND1-210ENST00000483503 CFAP53Q96M91 514 aa15.82■□□□□ 0.12
SND1-210ENST00000483503 CDK19Q9BWU1 502 aa15.82■□□□□ 0.12
SND1-210ENST00000483503 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
SND1-210ENST00000483503 EID1Q9Y6B2 187 aa15.82■□□□□ 0.12
SND1-210ENST00000483503 PLEKHG1Q9ULL1 1385 aa15.82■□□□□ 0.12
SND1-210ENST00000483503 FER1L4A9Z1Z3 1794 aa15.82■□□□□ 0.12
SND1-210ENST00000483503 C3P01024 1663 aa15.8■□□□□ 0.12
SND1-210ENST00000483503 MED14O60244 1454 aa15.8■□□□□ 0.12
SND1-210ENST00000483503 A0A1W2PP64 1363 aa15.79■□□□□ 0.12
SND1-210ENST00000483503 SENP3Q9H4L4 574 aaPredicted RBP15.79■□□□□ 0.12
SND1-210ENST00000483503 CPS1P31327 1500 aa15.78■□□□□ 0.12
SND1-210ENST00000483503 SLIT1O75093 1534 aa15.78■□□□□ 0.12
SND1-210ENST00000483503 ATP7BP35670 1465 aa15.78■□□□□ 0.12
SND1-210ENST00000483503 METP08581 1390 aa15.77■□□□□ 0.12
SND1-210ENST00000483503 THEMISQ8N1K5 641 aaPredicted RBP15.77■□□□□ 0.12
SND1-210ENST00000483503 ARHGAP23Q9P227 1491 aa15.77■□□□□ 0.11
SND1-210ENST00000483503 WASLO00401 505 aaPredicted RBP15.76■□□□□ 0.11
SND1-210ENST00000483503 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
SND1-210ENST00000483503 TXNDC2Q86VQ3 553 aa15.75■□□□□ 0.11
SND1-210ENST00000483503 RCAN3Q9UKA8 241 aa15.75■□□□□ 0.11
SND1-210ENST00000483503 SALL2Q9Y467 1007 aaPredicted RBP15.75■□□□□ 0.11
SND1-210ENST00000483503 ANKRD26Q9UPS8 1709 aa15.74■□□□□ 0.11
SND1-210ENST00000483503 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
SND1-210ENST00000483503 IRX6P78412 446 aaPredicted RBP15.74■□□□□ 0.11
SND1-210ENST00000483503 ADAMTS13Q76LX8 1427 aa15.74■□□□□ 0.11
SND1-210ENST00000483503 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
SND1-210ENST00000483503 CD163L1Q9NR16 1453 aa15.73■□□□□ 0.11
SND1-210ENST00000483503 CABP1Q9NZU7 370 aa15.73■□□□□ 0.11
SND1-210ENST00000483503 DIP2AQ14689 1571 aa15.73■□□□□ 0.11
SND1-210ENST00000483503 GOLGA2Q08379 1002 aa15.72■□□□□ 0.11
SND1-210ENST00000483503 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
SND1-210ENST00000483503 TBX22Q9Y458 520 aa15.72■□□□□ 0.11
SND1-210ENST00000483503 ZNF521Q96K83 1311 aa15.71■□□□□ 0.11
SND1-210ENST00000483503 SENP3-EIF4A1A0A087X0R7 540 aa15.71■□□□□ 0.11
SND1-210ENST00000483503 LTKP29376 864 aa15.71■□□□□ 0.11
SND1-210ENST00000483503 TNNT2P45379 298 aaPredicted RBP15.71■□□□□ 0.11
SND1-210ENST00000483503 MTHFSP49914 203 aa15.71■□□□□ 0.11
SND1-210ENST00000483503 FYB1O15117 783 aa15.7■□□□□ 0.1
SND1-210ENST00000483503 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
SND1-210ENST00000483503 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
SND1-210ENST00000483503 KIF20BQ96Q89 1820 aa15.7■□□□□ 0.1
SND1-210ENST00000483503 ADGRB2O60241 1585 aa15.7■□□□□ 0.1
SND1-210ENST00000483503 EDC4Q6P2E9 1401 aaKnown RBP15.69■□□□□ 0.1
SND1-210ENST00000483503 CCDC61Q9Y6R9 512 aa15.69■□□□□ 0.1
SND1-210ENST00000483503 SHPRHQ149N8 1683 aa15.69■□□□□ 0.1
SND1-210ENST00000483503 PPIP5K1Q6PFW1 1433 aa15.68■□□□□ 0.1
SND1-210ENST00000483503 APAF1O14727 1248 aa15.68■□□□□ 0.1
SND1-210ENST00000483503 NUDT16Q96DE0 195 aaKnown RBP15.68■□□□□ 0.1
SND1-210ENST00000483503 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
SND1-210ENST00000483503 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
SND1-210ENST00000483503 GGNBP2Q9H3C7 697 aa15.68■□□□□ 0.1
SND1-210ENST00000483503 CPSF1Q10570 1443 aaKnown RBP15.68■□□□□ 0.1
SND1-210ENST00000483503 E9PSI1 815 aa15.67■□□□□ 0.1
SND1-210ENST00000483503 CCDC146Q8IYE0 955 aa15.67■□□□□ 0.1
SND1-210ENST00000483503 PNNQ9H307 717 aaKnown RBP15.67■□□□□ 0.1
SND1-210ENST00000483503 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
SND1-210ENST00000483503 ROBO2Q9HCK4 1378 aa15.66■□□□□ 0.1
SND1-210ENST00000483503 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
SND1-210ENST00000483503 PTCH1Q13635 1447 aa15.66■□□□□ 0.1
SND1-210ENST00000483503 PIK3R4Q99570 1358 aa15.65■□□□□ 0.1
SND1-210ENST00000483503 CEP170BQ9Y4F5 1589 aaPredicted RBP15.65■□□□□ 0.1
SND1-210ENST00000483503 RIMS1Q86UR5 1692 aaKnown RBP15.64■□□□□ 0.09
SND1-210ENST00000483503 DUSP27Q5VZP5 1158 aa15.64■□□□□ 0.09
SND1-210ENST00000483503 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
SND1-210ENST00000483503 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
SND1-210ENST00000483503 CCDC27Q2M243 656 aa15.63■□□□□ 0.09
SND1-210ENST00000483503 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
SND1-210ENST00000483503 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms