RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 NUP155O75694 1391 aa23.84■■□□□ 1.41
HDLBP-238ENST00000479894 ZNF326Q5BKZ1 582 aaKnown RBP23.84■■□□□ 1.41
HDLBP-238ENST00000479894 PRAG1Q86YV5 1406 aa23.84■■□□□ 1.41
HDLBP-238ENST00000479894 BRWD3Q6RI45 1802 aa23.82■■□□□ 1.4
HDLBP-238ENST00000479894 KIF1BO60333 1816 aa23.8■■□□□ 1.4
HDLBP-238ENST00000479894 NPHP3Q7Z494 1330 aa23.8■■□□□ 1.4
HDLBP-238ENST00000479894 GLI3P10071 1580 aa23.78■■□□□ 1.4
HDLBP-238ENST00000479894 ROBO2Q9HCK4 1378 aa23.77■■□□□ 1.4
HDLBP-238ENST00000479894 PXDNQ92626 1479 aa23.76■■□□□ 1.39
HDLBP-238ENST00000479894 HFM1A2PYH4 1435 aa23.76■■□□□ 1.39
HDLBP-238ENST00000479894 RALGAPBQ86X10 1494 aa23.75■■□□□ 1.39
HDLBP-238ENST00000479894 CDC42BPGQ6DT37 1551 aa23.74■■□□□ 1.39
HDLBP-238ENST00000479894 CLTCL1P53675 1640 aa23.74■■□□□ 1.39
HDLBP-238ENST00000479894 SLIT2O94813 1529 aa23.74■■□□□ 1.39
HDLBP-238ENST00000479894 SF3B2Q13435 895 aaKnown RBP23.73■■□□□ 1.39
HDLBP-238ENST00000479894 DEFB132Q7Z7B7 95 aa23.72■■□□□ 1.39
HDLBP-238ENST00000479894 UNC5CLQ8IV45 518 aa23.72■■□□□ 1.39
HDLBP-238ENST00000479894 LRPPRCP42704 1394 aaKnown RBP23.7■■□□□ 1.38
HDLBP-238ENST00000479894 ESCO1Q5FWF5 840 aa23.69■■□□□ 1.38
HDLBP-238ENST00000479894 VGFO15240 615 aaPredicted RBP23.67■■□□□ 1.38
HDLBP-238ENST00000479894 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
HDLBP-238ENST00000479894 NWD2Q9ULI1 1742 aa23.65■■□□□ 1.38
HDLBP-238ENST00000479894 FOXO3O43524 673 aa23.65■■□□□ 1.38
HDLBP-238ENST00000479894 SEPT12Q8IYM1 358 aa23.63■■□□□ 1.37
HDLBP-238ENST00000479894 ONECUT3O60422 494 aaPredicted RBP23.62■■□□□ 1.37
HDLBP-238ENST00000479894 PPLO60437 1756 aa23.62■■□□□ 1.37
HDLBP-238ENST00000479894 KIF1AQ12756 1690 aa23.61■■□□□ 1.37
HDLBP-238ENST00000479894 HRCP23327 699 aa23.6■■□□□ 1.37
HDLBP-238ENST00000479894 XPCQ01831 940 aaPredicted RBP23.6■■□□□ 1.37
HDLBP-238ENST00000479894 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
HDLBP-238ENST00000479894 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
HDLBP-238ENST00000479894 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
HDLBP-238ENST00000479894 VPS72Q15906 364 aa23.59■■□□□ 1.37
HDLBP-238ENST00000479894 BAG6P46379 1132 aa23.57■■□□□ 1.36
HDLBP-238ENST00000479894 KRT27Q7Z3Y8 459 aa23.57■■□□□ 1.36
HDLBP-238ENST00000479894 NAIPQ13075 1403 aa23.57■■□□□ 1.36
HDLBP-238ENST00000479894 CCDC144AA2RUR9 1427 aa23.56■■□□□ 1.36
HDLBP-238ENST00000479894 PSDA5PKW4 1024 aaPredicted RBP23.55■■□□□ 1.36
HDLBP-238ENST00000479894 RGPD1P0DJD0 1748 aa23.55■■□□□ 1.36
HDLBP-238ENST00000479894 FMN2Q9NZ56 1722 aa23.55■■□□□ 1.36
HDLBP-238ENST00000479894 TECPR2O15040 1411 aa23.53■■□□□ 1.36
HDLBP-238ENST00000479894 KNDC1Q76NI1 1749 aa23.53■■□□□ 1.36
HDLBP-238ENST00000479894 ABCA3Q99758 1704 aa23.52■■□□□ 1.36
HDLBP-238ENST00000479894 TNS3Q68CZ2 1445 aa23.49■■□□□ 1.35
HDLBP-238ENST00000479894 HAP1P54257 671 aaPredicted RBP23.48■■□□□ 1.35
HDLBP-238ENST00000479894 KRT28Q7Z3Y7 464 aa23.48■■□□□ 1.35
HDLBP-238ENST00000479894 RGPD8O14715 1765 aaPredicted RBP23.47■■□□□ 1.35
HDLBP-238ENST00000479894 NUTM2FA1L443 756 aa23.47■■□□□ 1.35
HDLBP-238ENST00000479894 CCDC9Q9Y3X0 531 aaKnown RBP23.47■■□□□ 1.35
HDLBP-238ENST00000479894 DISP2A7MBM2 1401 aa23.46■■□□□ 1.35
HDLBP-238ENST00000479894 ITGAEP38570 1179 aa23.46■■□□□ 1.35
HDLBP-238ENST00000479894 NRAPQ86VF7 1730 aa23.46■■□□□ 1.35
HDLBP-238ENST00000479894 IFT172Q9UG01 1749 aa23.45■■□□□ 1.34
HDLBP-238ENST00000479894 PSME1Q06323 249 aa23.44■■□□□ 1.34
HDLBP-238ENST00000479894 WAPLQ7Z5K2 1190 aa23.44■■□□□ 1.34
HDLBP-238ENST00000479894 TNS1Q9HBL0 1735 aaKnown RBP23.44■■□□□ 1.34
HDLBP-238ENST00000479894 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
HDLBP-238ENST00000479894 SBNO1A3KN83 1393 aa23.42■■□□□ 1.34
HDLBP-238ENST00000479894 EN1Q05925 392 aaPredicted RBP23.42■■□□□ 1.34
HDLBP-238ENST00000479894 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
HDLBP-238ENST00000479894 R3HDM1Q15032 1099 aaKnown RBP23.4■■□□□ 1.34
HDLBP-238ENST00000479894 CABLES1Q8TDN4 633 aa23.4■■□□□ 1.34
HDLBP-238ENST00000479894 A0A0G2JS52 829 aa23.39■■□□□ 1.33
HDLBP-238ENST00000479894 MYT1Q01538 1121 aa23.39■■□□□ 1.33
HDLBP-238ENST00000479894 NRXN1Q9ULB1 1477 aa23.38■■□□□ 1.33
HDLBP-238ENST00000479894 STK26Q9P289 416 aa23.38■■□□□ 1.33
HDLBP-238ENST00000479894 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
HDLBP-238ENST00000479894 PLEKHH1Q9ULM0 1364 aa23.38■■□□□ 1.33
HDLBP-238ENST00000479894 COL14A1Q05707 1796 aaKnown RBP23.37■■□□□ 1.33
HDLBP-238ENST00000479894 FAM83GA6ND36 823 aa23.37■■□□□ 1.33
HDLBP-238ENST00000479894 FAM98CQ17RN3 349 aaKnown RBP23.37■■□□□ 1.33
HDLBP-238ENST00000479894 PHF8Q9UPP1 1060 aa23.37■■□□□ 1.33
HDLBP-238ENST00000479894 ADGRB2O60241 1585 aa23.36■■□□□ 1.33
HDLBP-238ENST00000479894 YY1P25490 414 aa23.36■■□□□ 1.33
HDLBP-238ENST00000479894 ADGRF5Q8IZF2 1346 aa23.35■■□□□ 1.33
HDLBP-238ENST00000479894 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
HDLBP-238ENST00000479894 SIRT1Q96EB6 747 aa23.35■■□□□ 1.33
HDLBP-238ENST00000479894 ANKRD30BQ9BXX2 1392 aa23.32■■□□□ 1.32
HDLBP-238ENST00000479894 YTHDC2Q9H6S0 1430 aaKnown RBP23.32■■□□□ 1.32
HDLBP-238ENST00000479894 PARD3Q8TEW0 1356 aa23.31■■□□□ 1.32
HDLBP-238ENST00000479894 BTG4Q9NY30 223 aa23.31■■□□□ 1.32
HDLBP-238ENST00000479894 EZH2Q15910 746 aaKnown RBP23.3■■□□□ 1.32
HDLBP-238ENST00000479894 LMOD2Q6P5Q4 547 aa23.3■■□□□ 1.32
HDLBP-238ENST00000479894 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
HDLBP-238ENST00000479894 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
HDLBP-238ENST00000479894 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
HDLBP-238ENST00000479894 PIK3C2GO75747 1445 aa23.29■■□□□ 1.32
HDLBP-238ENST00000479894 RREB1Q92766 1687 aa23.28■■□□□ 1.32
HDLBP-238ENST00000479894 ALS2Q96Q42 1657 aa23.28■■□□□ 1.32
HDLBP-238ENST00000479894 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
HDLBP-238ENST00000479894 CAMKK2Q96RR4 588 aa23.28■■□□□ 1.32
HDLBP-238ENST00000479894 PLEKHG5O94827 1062 aa23.27■■□□□ 1.32
HDLBP-238ENST00000479894 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
HDLBP-238ENST00000479894 FAM182BQ5T319 152 aa23.26■■□□□ 1.31
HDLBP-238ENST00000479894 SPATA31E1Q6ZUB1 1445 aa23.25■■□□□ 1.31
HDLBP-238ENST00000479894 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
HDLBP-238ENST00000479894 CRYBG1Q9Y4K1 1723 aa23.25■■□□□ 1.31
HDLBP-238ENST00000479894 NUP188Q5SRE5 1749 aa23.24■■□□□ 1.31
HDLBP-238ENST00000479894 FAM196AQ6ZSG2 479 aa23.23■■□□□ 1.31
HDLBP-238ENST00000479894 PPARGC1BQ86YN6 1023 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms