RNA–Protein interactions for RNA: ENST00000479353.5

PTGER3-210, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,895 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-210ENST00000479353 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
PTGER3-210ENST00000479353 SLIT1O75093 1534 aa28.13■■■□□ 2.09
PTGER3-210ENST00000479353 ARHGAP23Q9P227 1491 aa28.13■■■□□ 2.09
PTGER3-210ENST00000479353 POGKQ9P215 609 aa28.12■■■□□ 2.09
PTGER3-210ENST00000479353 MINK1Q8N4C8 1332 aaPredicted RBP28.12■■■□□ 2.09
PTGER3-210ENST00000479353 ADAMTS13Q76LX8 1427 aa28.12■■■□□ 2.09
PTGER3-210ENST00000479353 PLEKHH1Q9ULM0 1364 aa28.11■■■□□ 2.09
PTGER3-210ENST00000479353 TECPR2O15040 1411 aa28.1■■■□□ 2.09
PTGER3-210ENST00000479353 ANKRD36BQ8N2N9 1353 aa28.1■■■□□ 2.09
PTGER3-210ENST00000479353 CPS1P31327 1500 aa28.1■■■□□ 2.09
PTGER3-210ENST00000479353 LTKP29376 864 aa28.09■■■□□ 2.09
PTGER3-210ENST00000479353 ADAMTSL3P82987 1691 aa28.09■■■□□ 2.09
PTGER3-210ENST00000479353 PLEKHG1Q9ULL1 1385 aa28.09■■■□□ 2.09
PTGER3-210ENST00000479353 INSRP06213 1382 aa28.07■■■□□ 2.08
PTGER3-210ENST00000479353 NINLQ9Y2I6 1382 aa28.07■■■□□ 2.08
PTGER3-210ENST00000479353 WAPLQ7Z5K2 1190 aa28.06■■■□□ 2.08
PTGER3-210ENST00000479353 MED14O60244 1454 aa28.06■■■□□ 2.08
PTGER3-210ENST00000479353 SUPT16HQ9Y5B9 1047 aaKnown RBP28.06■■■□□ 2.08
PTGER3-210ENST00000479353 BLMP54132 1417 aaPredicted RBP28.05■■■□□ 2.08
PTGER3-210ENST00000479353 ATAD2Q6PL18 1390 aa28.05■■■□□ 2.08
PTGER3-210ENST00000479353 PLPPR3Q6T4P5 718 aa28.05■■■□□ 2.08
PTGER3-210ENST00000479353 SRPK2P78362 688 aaKnown RBP28.04■■■□□ 2.08
PTGER3-210ENST00000479353 CD163L1Q9NR16 1453 aa28.04■■■□□ 2.08
PTGER3-210ENST00000479353 FAM135BQ49AJ0 1406 aa28.03■■■□□ 2.08
PTGER3-210ENST00000479353 A0A1W2PP64 1363 aa28.02■■■□□ 2.08
PTGER3-210ENST00000479353 CEP170BQ9Y4F5 1589 aaPredicted RBP28.01■■■□□ 2.08
PTGER3-210ENST00000479353 CDK19Q9BWU1 502 aa28.01■■■□□ 2.07
PTGER3-210ENST00000479353 TXNDC2Q86VQ3 553 aa28■■■□□ 2.07
PTGER3-210ENST00000479353 SIRT1Q96EB6 747 aa27.99■■■□□ 2.07
PTGER3-210ENST00000479353 SENP3-EIF4A1A0A087X0R7 540 aa27.98■■■□□ 2.07
PTGER3-210ENST00000479353 ZNF142P52746 1687 aaPredicted RBP27.97■■■□□ 2.07
PTGER3-210ENST00000479353 SMG6Q86US8 1419 aaKnown RBP27.96■■■□□ 2.07
PTGER3-210ENST00000479353 BCANQ96GW7 911 aa27.96■■■□□ 2.07
PTGER3-210ENST00000479353 ANKRD26Q9UPS8 1709 aa27.96■■■□□ 2.07
PTGER3-210ENST00000479353 CGNL1Q0VF96 1302 aa27.96■■■□□ 2.07
PTGER3-210ENST00000479353 NSD2O96028 1365 aa27.95■■■□□ 2.06
PTGER3-210ENST00000479353 ROBO2Q9HCK4 1378 aa27.95■■■□□ 2.06
PTGER3-210ENST00000479353 EID1Q9Y6B2 187 aa27.94■■■□□ 2.06
PTGER3-210ENST00000479353 PTPRUQ92729 1446 aa27.94■■■□□ 2.06
PTGER3-210ENST00000479353 THEMISQ8N1K5 641 aaPredicted RBP27.93■■■□□ 2.06
PTGER3-210ENST00000479353 DIP2AQ14689 1571 aa27.93■■■□□ 2.06
PTGER3-210ENST00000479353 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.92■■■□□ 2.06
PTGER3-210ENST00000479353 ADAMTS8Q9UP79 889 aa27.92■■■□□ 2.06
PTGER3-210ENST00000479353 ADGRB2O60241 1585 aa27.92■■■□□ 2.06
PTGER3-210ENST00000479353 FKBP8Q14318 412 aa27.91■■■□□ 2.06
PTGER3-210ENST00000479353 SHPRHQ149N8 1683 aa27.91■■■□□ 2.06
PTGER3-210ENST00000479353 MORC1Q86VD1 984 aa27.91■■■□□ 2.06
PTGER3-210ENST00000479353 KIF20BQ96Q89 1820 aa27.9■■■□□ 2.06
PTGER3-210ENST00000479353 ATP7BP35670 1465 aa27.9■■■□□ 2.06
PTGER3-210ENST00000479353 POLR3AO14802 1390 aaPredicted RBP27.89■■■□□ 2.06
PTGER3-210ENST00000479353 WASLO00401 505 aaPredicted RBP27.89■■■□□ 2.05
PTGER3-210ENST00000479353 SLC26A8Q96RN1 970 aa27.89■■■□□ 2.05
PTGER3-210ENST00000479353 TERF2IPQ9NYB0 399 aa27.88■■■□□ 2.05
PTGER3-210ENST00000479353 SETD1BQ9UPS6 1966 aaKnown RBP27.88■■■□□ 2.05
PTGER3-210ENST00000479353 CABP1Q9NZU7 370 aa27.87■■■□□ 2.05
PTGER3-210ENST00000479353 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
PTGER3-210ENST00000479353 XRN1Q8IZH2 1706 aaKnown RBP27.85■■■□□ 2.05
PTGER3-210ENST00000479353 NEFLP07196 543 aa27.85■■■□□ 2.05
PTGER3-210ENST00000479353 WDR43Q15061 677 aaKnown RBP eCLIP27.85■■■□□ 2.05
PTGER3-210ENST00000479353 TBX22Q9Y458 520 aa27.85■■■□□ 2.05
PTGER3-210ENST00000479353 AKAP12Q02952 1782 aa27.82■■■□□ 2.04
PTGER3-210ENST00000479353 MON2Q7Z3U7 1717 aa27.82■■■□□ 2.04
PTGER3-210ENST00000479353 TOPAZ1Q8N9V7 1692 aa27.82■■■□□ 2.04
PTGER3-210ENST00000479353 CDC42BPGQ6DT37 1551 aa27.82■■■□□ 2.04
PTGER3-210ENST00000479353 TNNT2P45379 298 aaPredicted RBP27.81■■■□□ 2.04
PTGER3-210ENST00000479353 HDGFL2Q7Z4V5 671 aaPredicted RBP27.81■■■□□ 2.04
PTGER3-210ENST00000479353 CPSF1Q10570 1443 aaKnown RBP27.81■■■□□ 2.04
PTGER3-210ENST00000479353 PTCH1Q13635 1447 aa27.81■■■□□ 2.04
PTGER3-210ENST00000479353 PPIP5K1Q6PFW1 1433 aa27.81■■■□□ 2.04
PTGER3-210ENST00000479353 FYB1O15117 783 aa27.79■■■□□ 2.04
PTGER3-210ENST00000479353 SALL2Q9Y467 1007 aaPredicted RBP27.79■■■□□ 2.04
PTGER3-210ENST00000479353 ITSN1Q15811 1721 aa27.79■■■□□ 2.04
PTGER3-210ENST00000479353 NUDT16Q96DE0 195 aaKnown RBP27.77■■■□□ 2.04
PTGER3-210ENST00000479353 PRR36Q9H6K5 1346 aa27.77■■■□□ 2.04
PTGER3-210ENST00000479353 GGNBP2Q9H3C7 697 aa27.76■■■□□ 2.04
PTGER3-210ENST00000479353 AMOTL2Q9Y2J4 779 aa27.76■■■□□ 2.04
PTGER3-210ENST00000479353 MTHFSP49914 203 aa27.74■■■□□ 2.03
PTGER3-210ENST00000479353 PDE3BQ13370 1112 aa27.74■■■□□ 2.03
PTGER3-210ENST00000479353 NCKAP5LQ9HCH0 1330 aa27.74■■■□□ 2.03
PTGER3-210ENST00000479353 CCDC61Q9Y6R9 512 aa27.72■■■□□ 2.03
PTGER3-210ENST00000479353 EDC4Q6P2E9 1401 aaKnown RBP27.72■■■□□ 2.03
PTGER3-210ENST00000479353 CHD2O14647 1828 aaKnown RBP27.72■■■□□ 2.03
PTGER3-210ENST00000479353 PIK3R4Q99570 1358 aa27.71■■■□□ 2.03
PTGER3-210ENST00000479353 COL3A1P02461 1466 aaPredicted RBP27.7■■■□□ 2.03
PTGER3-210ENST00000479353 RNF123Q5XPI4 1314 aa27.7■■■□□ 2.02
PTGER3-210ENST00000479353 ZNF521Q96K83 1311 aa27.69■■■□□ 2.02
PTGER3-210ENST00000479353 IRX6P78412 446 aaPredicted RBP27.69■■■□□ 2.02
PTGER3-210ENST00000479353 CCDC146Q8IYE0 955 aa27.69■■■□□ 2.02
PTGER3-210ENST00000479353 CDCA7LQ96GN5 454 aa27.69■■■□□ 2.02
PTGER3-210ENST00000479353 NRKQ7Z2Y5 1582 aa27.69■■■□□ 2.02
PTGER3-210ENST00000479353 NKTRP30414 1462 aaKnown RBP27.67■■■□□ 2.02
PTGER3-210ENST00000479353 ANKLE2Q86XL3 938 aa27.66■■■□□ 2.02
PTGER3-210ENST00000479353 RGPD8O14715 1765 aaPredicted RBP27.66■■■□□ 2.02
PTGER3-210ENST00000479353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.65■■■□□ 2.02
PTGER3-210ENST00000479353 CFAP53Q96M91 514 aa27.64■■■□□ 2.02
PTGER3-210ENST00000479353 MAP2P11137 1827 aaKnown RBP27.63■■■□□ 2.01
PTGER3-210ENST00000479353 KCNA6P17658 529 aa27.62■■■□□ 2.01
PTGER3-210ENST00000479353 IQSEC2Q5JU85 1478 aa27.62■■■□□ 2.01
PTGER3-210ENST00000479353 APAF1O14727 1248 aa27.61■■■□□ 2.01
PTGER3-210ENST00000479353 FMN2Q9NZ56 1722 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms