RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
NUP35-209ENST00000479162 BECN1Q14457 450 aa13□□□□□ -0.33
NUP35-209ENST00000479162 HSP90AB4PQ58FF6 505 aa13□□□□□ -0.33
NUP35-209ENST00000479162 KIF13AQ9H1H9 1805 aa13□□□□□ -0.33
NUP35-209ENST00000479162 MAP3K1Q13233 1512 aa13□□□□□ -0.33
NUP35-209ENST00000479162 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
NUP35-209ENST00000479162 GABPB1Q06547 395 aaPredicted RBP12.99□□□□□ -0.33
NUP35-209ENST00000479162 CALR3Q96L12 384 aaKnown RBP12.99□□□□□ -0.33
NUP35-209ENST00000479162 DONSONQ9NYP3 566 aa12.99□□□□□ -0.33
NUP35-209ENST00000479162 DIP2BQ9P265 1576 aa12.99□□□□□ -0.33
NUP35-209ENST00000479162 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
NUP35-209ENST00000479162 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
NUP35-209ENST00000479162 TDO2P48775 406 aa12.98□□□□□ -0.33
NUP35-209ENST00000479162 RINLQ6ZS11 566 aa12.98□□□□□ -0.33
NUP35-209ENST00000479162 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
NUP35-209ENST00000479162 MAP3K4Q9Y6R4 1608 aa12.98□□□□□ -0.33
NUP35-209ENST00000479162 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
NUP35-209ENST00000479162 KIF1CO43896 1103 aaKnown RBP12.98□□□□□ -0.33
NUP35-209ENST00000479162 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
NUP35-209ENST00000479162 FEZ2Q9UHY8 353 aaPredicted RBP12.98□□□□□ -0.33
NUP35-209ENST00000479162 ARMCX6Q7L4S7 300 aa12.97□□□□□ -0.33
NUP35-209ENST00000479162 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
NUP35-209ENST00000479162 BORCS6Q96GS4 357 aa12.97□□□□□ -0.33
NUP35-209ENST00000479162 CCDC173Q0VFZ6 552 aa12.96□□□□□ -0.33
NUP35-209ENST00000479162 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.33
NUP35-209ENST00000479162 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
NUP35-209ENST00000479162 NUP153P49790 1475 aaKnown RBP12.95□□□□□ -0.34
NUP35-209ENST00000479162 ABCC10Q5T3U5 1492 aa12.95□□□□□ -0.34
NUP35-209ENST00000479162 KDM4AO75164 1064 aa12.95□□□□□ -0.34
NUP35-209ENST00000479162 ITFG2Q969R8 447 aa12.95□□□□□ -0.34
NUP35-209ENST00000479162 ARAP3Q8WWN8 1544 aa12.95□□□□□ -0.34
NUP35-209ENST00000479162 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
NUP35-209ENST00000479162 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
NUP35-209ENST00000479162 CALRP27797 417 aaKnown RBP12.94□□□□□ -0.34
NUP35-209ENST00000479162 ICE2Q659A1 982 aa12.94□□□□□ -0.34
NUP35-209ENST00000479162 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
NUP35-209ENST00000479162 ABCA9Q8IUA7 1624 aa12.94□□□□□ -0.34
NUP35-209ENST00000479162 CLIP1P30622 1438 aa12.94□□□□□ -0.34
NUP35-209ENST00000479162 MNS1Q8NEH6 495 aa12.94□□□□□ -0.34
NUP35-209ENST00000479162 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
NUP35-209ENST00000479162 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
NUP35-209ENST00000479162 MTA1Q13330 715 aa12.93□□□□□ -0.34
NUP35-209ENST00000479162 FAM177A1Q8N128 213 aaPredicted RBP12.93□□□□□ -0.34
NUP35-209ENST00000479162 RSPH14Q9UHP6 348 aa12.93□□□□□ -0.34
NUP35-209ENST00000479162 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
NUP35-209ENST00000479162 WDR7Q9Y4E6 1490 aa12.92□□□□□ -0.34
NUP35-209ENST00000479162 CEP162Q5TB80 1403 aa12.92□□□□□ -0.34
NUP35-209ENST00000479162 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
NUP35-209ENST00000479162 RNF123Q5XPI4 1314 aa12.92□□□□□ -0.34
NUP35-209ENST00000479162 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
NUP35-209ENST00000479162 DHX16O60231 1041 aaKnown RBP12.91□□□□□ -0.34
NUP35-209ENST00000479162 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
NUP35-209ENST00000479162 FHOD3Q2V2M9 1422 aa12.91□□□□□ -0.34
NUP35-209ENST00000479162 ANKRD23Q86SG2 305 aa12.91□□□□□ -0.34
NUP35-209ENST00000479162 PPP1R9BQ96SB3 815 aa12.91□□□□□ -0.34
NUP35-209ENST00000479162 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
NUP35-209ENST00000479162 ATP10BO94823 1461 aa12.9□□□□□ -0.34
NUP35-209ENST00000479162 MED4Q9NPJ6 270 aa12.9□□□□□ -0.34
NUP35-209ENST00000479162 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
NUP35-209ENST00000479162 PPRC1Q5VV67 1664 aaKnown RBP12.9□□□□□ -0.34
NUP35-209ENST00000479162 CT47B1P0C2W7 299 aaPredicted RBP12.89□□□□□ -0.35
NUP35-209ENST00000479162 HS1BP3Q53T59 392 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 LRCH2Q5VUJ6 765 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 TNNT1P13805 278 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 MYRIPQ8NFW9 859 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 FEZ1Q99689 392 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
NUP35-209ENST00000479162 DNAJC21Q5F1R6 531 aaKnown RBP12.89□□□□□ -0.35
NUP35-209ENST00000479162 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
NUP35-209ENST00000479162 POLD1P28340 1107 aa12.88□□□□□ -0.35
NUP35-209ENST00000479162 FOXD4L6Q3SYB3 417 aaPredicted RBP12.88□□□□□ -0.35
NUP35-209ENST00000479162 FOXD4L3Q6VB84 417 aaPredicted RBP12.88□□□□□ -0.35
NUP35-209ENST00000479162 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
NUP35-209ENST00000479162 PAIP2Q9BPZ3 127 aaKnown RBP12.88□□□□□ -0.35
NUP35-209ENST00000479162 PPP1R12AO14974 1030 aaPredicted RBP12.88□□□□□ -0.35
NUP35-209ENST00000479162 NRDCO43847 1150 aa12.88□□□□□ -0.35
NUP35-209ENST00000479162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.35
NUP35-209ENST00000479162 MAGI3Q5TCQ9 1506 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.355e-6■■■□□ 15.9
NUP35-209ENST00000479162 SUFUQ9UMX1 484 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 CCDC189A1A4V9 331 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 SLFN14P0C7P3 912 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
NUP35-209ENST00000479162 BIRC2Q13490 618 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
NUP35-209ENST00000479162 FAM210AQ96ND0 272 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 ASXL2Q76L83 1435 aa12.87□□□□□ -0.35
NUP35-209ENST00000479162 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
NUP35-209ENST00000479162 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
NUP35-209ENST00000479162 EXOC8Q8IYI6 725 aa12.86□□□□□ -0.35
NUP35-209ENST00000479162 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
NUP35-209ENST00000479162 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
NUP35-209ENST00000479162 RASSF4Q9H2L5 321 aa12.85□□□□□ -0.35
NUP35-209ENST00000479162 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
NUP35-209ENST00000479162 NOL10Q9BSC4 688 aaKnown RBP12.85□□□□□ -0.35
NUP35-209ENST00000479162 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms