RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
RTFDC1-207ENST00000477573 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
RTFDC1-207ENST00000477573 ARHGAP31Q2M1Z3 1444 aa16.21■□□□□ 0.19
RTFDC1-207ENST00000477573 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
RTFDC1-207ENST00000477573 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
RTFDC1-207ENST00000477573 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
RTFDC1-207ENST00000477573 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 REREQ9P2R6 1566 aa16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 NOS1P29475 1434 aa16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 XRCC6P12956 609 aaKnown RBP eCLIP16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 TMF1P82094 1093 aa16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 KIF13AQ9H1H9 1805 aa16.19■□□□□ 0.18
RTFDC1-207ENST00000477573 SCAF11Q99590 1463 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-207ENST00000477573 IFT172Q9UG01 1749 aa16.18■□□□□ 0.18
RTFDC1-207ENST00000477573 EIF3AQ14152 1382 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-207ENST00000477573 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 GOLGA6L3A6NEY3 463 aa16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 ZNF830Q96NB3 372 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 POGKQ9P215 609 aa16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 IQGAP1P46940 1657 aa16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
RTFDC1-207ENST00000477573 MROH2AA6NES4 1674 aa16.16■□□□□ 0.18
RTFDC1-207ENST00000477573 TESK2Q96S53 571 aa16.16■□□□□ 0.18
RTFDC1-207ENST00000477573 AGLP35573 1532 aa16.15■□□□□ 0.18
RTFDC1-207ENST00000477573 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
RTFDC1-207ENST00000477573 KTN1Q86UP2 1357 aaKnown RBP16.15■□□□□ 0.18
RTFDC1-207ENST00000477573 GTPBP4Q9BZE4 634 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-207ENST00000477573 NUDCQ9Y266 331 aa16.14■□□□□ 0.17
RTFDC1-207ENST00000477573 NRXN1Q9ULB1 1477 aa16.14■□□□□ 0.17
RTFDC1-207ENST00000477573 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
RTFDC1-207ENST00000477573 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
RTFDC1-207ENST00000477573 SLC52A1Q9NWF4 448 aa16.14■□□□□ 0.17
RTFDC1-207ENST00000477573 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
RTFDC1-207ENST00000477573 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-207ENST00000477573 PIK3C2BO00750 1634 aa16.13■□□□□ 0.17
RTFDC1-207ENST00000477573 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
RTFDC1-207ENST00000477573 SIGLEC1Q9BZZ2 1709 aa16.13■□□□□ 0.17
RTFDC1-207ENST00000477573 LETM1O95202 739 aaPredicted RBP16.13■□□□□ 0.17
RTFDC1-207ENST00000477573 ANP32BQ92688 251 aaKnown RBP16.12■□□□□ 0.17
RTFDC1-207ENST00000477573 SYNMO15061 1565 aa16.12■□□□□ 0.17
RTFDC1-207ENST00000477573 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
RTFDC1-207ENST00000477573 PPLO60437 1756 aa16.11■□□□□ 0.17
RTFDC1-207ENST00000477573 DISP3Q9P2K9 1392 aa16.11■□□□□ 0.17
RTFDC1-207ENST00000477573 MRE11P49959 708 aa16.11■□□□□ 0.17
RTFDC1-207ENST00000477573 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
RTFDC1-207ENST00000477573 RIPK4P57078 832 aa16.1■□□□□ 0.17
RTFDC1-207ENST00000477573 ZSCAN20P17040 1043 aaPredicted RBP16.09■□□□□ 0.17
RTFDC1-207ENST00000477573 RALBP1Q15311 655 aa16.09■□□□□ 0.17
RTFDC1-207ENST00000477573 PREX1Q8TCU6 1659 aa16.09■□□□□ 0.17
RTFDC1-207ENST00000477573 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
RTFDC1-207ENST00000477573 SETBP1Q9Y6X0 1596 aa16.09■□□□□ 0.17
RTFDC1-207ENST00000477573 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
RTFDC1-207ENST00000477573 PIK3C2GO75747 1445 aa16.08■□□□□ 0.16
RTFDC1-207ENST00000477573 OFD1O75665 1012 aa16.07■□□□□ 0.16
RTFDC1-207ENST00000477573 MYH16Q9H6N6 1097 aa16.07■□□□□ 0.16
RTFDC1-207ENST00000477573 IDI1Q13907 227 aa16.06■□□□□ 0.16
RTFDC1-207ENST00000477573 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
RTFDC1-207ENST00000477573 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
RTFDC1-207ENST00000477573 SLC4A3P48751 1232 aa16.06■□□□□ 0.16
RTFDC1-207ENST00000477573 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
RTFDC1-207ENST00000477573 C14orf93Q9H972 538 aaKnown RBP16.06■□□□□ 0.16
RTFDC1-207ENST00000477573 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
RTFDC1-207ENST00000477573 RGS22Q8NE09 1264 aa16.05■□□□□ 0.16
RTFDC1-207ENST00000477573 TRIM44Q96DX7 344 aaPredicted RBP16.05■□□□□ 0.16
RTFDC1-207ENST00000477573 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
RTFDC1-207ENST00000477573 CDK11BP21127 795 aaKnown RBP16.04■□□□□ 0.16
RTFDC1-207ENST00000477573 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
RTFDC1-207ENST00000477573 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
RTFDC1-207ENST00000477573 CCDC94Q9BW85 323 aaPredicted RBP16.03■□□□□ 0.16
RTFDC1-207ENST00000477573 ERVK-7P63135 1459 aa16.03■□□□□ 0.16
RTFDC1-207ENST00000477573 NEXMIFQ5QGS0 1516 aa16.03■□□□□ 0.16
RTFDC1-207ENST00000477573 ZFYVE9O95405 1425 aa16.03■□□□□ 0.16
RTFDC1-207ENST00000477573 SLC20A2Q08357 652 aa16.03■□□□□ 0.16
RTFDC1-207ENST00000477573 PANK3Q9H999 370 aa16.03■□□□□ 0.16
RTFDC1-207ENST00000477573 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
RTFDC1-207ENST00000477573 TMC1Q8TDI8 760 aa16.02■□□□□ 0.16
RTFDC1-207ENST00000477573 PANK2Q9BZ23 570 aa16.02■□□□□ 0.16
RTFDC1-207ENST00000477573 ESF1Q9H501 851 aaKnown RBP16.02■□□□□ 0.16
RTFDC1-207ENST00000477573 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.16
RTFDC1-207ENST00000477573 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.15
RTFDC1-207ENST00000477573 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.15
RTFDC1-207ENST00000477573 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
RTFDC1-207ENST00000477573 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
RTFDC1-207ENST00000477573 DYNC1I1O14576 645 aa16.01■□□□□ 0.15
RTFDC1-207ENST00000477573 TMEM131LA2VDJ0 1609 aa16.01■□□□□ 0.15
RTFDC1-207ENST00000477573 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
RTFDC1-207ENST00000477573 VGLL3A8MV65 326 aa16■□□□□ 0.15
RTFDC1-207ENST00000477573 PARD3Q8TEW0 1356 aa16■□□□□ 0.15
RTFDC1-207ENST00000477573 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
RTFDC1-207ENST00000477573 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
RTFDC1-207ENST00000477573 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
RTFDC1-207ENST00000477573 ADGRB1O14514 1584 aa15.98■□□□□ 0.15
RTFDC1-207ENST00000477573 HSP90B1P14625 803 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-207ENST00000477573 MLECQ14165 292 aa15.98■□□□□ 0.15
RTFDC1-207ENST00000477573 NLRP13Q86W25 1043 aa15.97■□□□□ 0.15
RTFDC1-207ENST00000477573 PRDM10Q9NQV6 1147 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms