RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
COL4A5-204ENST00000477429 PPARGC1BQ86YN6 1023 aaKnown RBP15.08■□□□□ 0
COL4A5-204ENST00000477429 SPHKAPQ2M3C7 1700 aa15.08■□□□□ 0
COL4A5-204ENST00000477429 ZNF784Q8NCA9 323 aaPredicted RBP15.07■□□□□ 0
COL4A5-204ENST00000477429 SOS2Q07890 1332 aaPredicted RBP15.06■□□□□ 0
COL4A5-204ENST00000477429 LAMC1P11047 1609 aa15.06■□□□□ 0
COL4A5-204ENST00000477429 BLMP54132 1417 aaPredicted RBP15.05■□□□□ -0
COL4A5-204ENST00000477429 ATRNO75882 1429 aa15.03■□□□□ -0
COL4A5-204ENST00000477429 USP21Q9UK80 565 aa15.03■□□□□ -0
COL4A5-204ENST00000477429 FNBP4Q8N3X1 1017 aaPredicted RBP15.02■□□□□ -0
COL4A5-204ENST00000477429 PTCH1Q13635 1447 aa15□□□□□ -0.01
COL4A5-204ENST00000477429 SLC34A2O95436 690 aa15□□□□□ -0.01
COL4A5-204ENST00000477429 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
COL4A5-204ENST00000477429 MYOM2P54296 1465 aa15□□□□□ -0.01
COL4A5-204ENST00000477429 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
COL4A5-204ENST00000477429 PXDNQ92626 1479 aa14.98□□□□□ -0.01
COL4A5-204ENST00000477429 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
COL4A5-204ENST00000477429 PRAG1Q86YV5 1406 aa14.97□□□□□ -0.01
COL4A5-204ENST00000477429 CAMTA1Q9Y6Y1 1673 aa14.95□□□□□ -0.02
COL4A5-204ENST00000477429 NAIPQ13075 1403 aa14.94□□□□□ -0.02
COL4A5-204ENST00000477429 NUTM2FA1L443 756 aa14.94□□□□□ -0.02
COL4A5-204ENST00000477429 FOXO3O43524 673 aa14.94□□□□□ -0.02
COL4A5-204ENST00000477429 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
COL4A5-204ENST00000477429 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
COL4A5-204ENST00000477429 UTRNP46939 3433 aa14.93□□□□□ -0.02
COL4A5-204ENST00000477429 KIF1BO60333 1816 aa14.92□□□□□ -0.02
COL4A5-204ENST00000477429 R3HDM1Q15032 1099 aaKnown RBP14.92□□□□□ -0.02
COL4A5-204ENST00000477429 PLEKHH1Q9ULM0 1364 aa14.92□□□□□ -0.02
COL4A5-204ENST00000477429 GLI3P10071 1580 aa14.92□□□□□ -0.02
COL4A5-204ENST00000477429 ADGRF5Q8IZF2 1346 aa14.92□□□□□ -0.02
COL4A5-204ENST00000477429 VGFO15240 615 aaPredicted RBP14.91□□□□□ -0.02
COL4A5-204ENST00000477429 GJD4Q96KN9 370 aaPredicted RBP14.91□□□□□ -0.02
COL4A5-204ENST00000477429 HFM1A2PYH4 1435 aa14.91□□□□□ -0.02
COL4A5-204ENST00000477429 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
COL4A5-204ENST00000477429 PPLO60437 1756 aa14.9□□□□□ -0.02
COL4A5-204ENST00000477429 BRWD3Q6RI45 1802 aa14.89□□□□□ -0.03
COL4A5-204ENST00000477429 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
COL4A5-204ENST00000477429 MARF1Q9Y4F3 1742 aaKnown RBP14.89□□□□□ -0.03
COL4A5-204ENST00000477429 NPHP3Q7Z494 1330 aa14.89□□□□□ -0.03
COL4A5-204ENST00000477429 SLIT2O94813 1529 aa14.88□□□□□ -0.03
COL4A5-204ENST00000477429 STK26Q9P289 416 aa14.88□□□□□ -0.03
COL4A5-204ENST00000477429 TMEM132EQ6IEE7 984 aa14.87□□□□□ -0.03
COL4A5-204ENST00000477429 RPGRIP1LQ68CZ1 1315 aa14.86□□□□□ -0.03
COL4A5-204ENST00000477429 SF3B2Q13435 895 aaKnown RBP14.85□□□□□ -0.03
COL4A5-204ENST00000477429 UNC5CLQ8IV45 518 aa14.85□□□□□ -0.03
COL4A5-204ENST00000477429 CABLES1Q8TDN4 633 aa14.85□□□□□ -0.03
COL4A5-204ENST00000477429 SPATA31A3Q5VYP0 1347 aa14.85□□□□□ -0.03
COL4A5-204ENST00000477429 RRBP1Q9P2E9 1410 aaKnown RBP14.84□□□□□ -0.03
COL4A5-204ENST00000477429 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
COL4A5-204ENST00000477429 TECPR2O15040 1411 aa14.83□□□□□ -0.03
COL4A5-204ENST00000477429 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.83□□□□□ -0.03
COL4A5-204ENST00000477429 LRPPRCP42704 1394 aaKnown RBP14.83□□□□□ -0.04
COL4A5-204ENST00000477429 SEPT12Q8IYM1 358 aa14.82□□□□□ -0.04
COL4A5-204ENST00000477429 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
COL4A5-204ENST00000477429 SPATA31E1Q6ZUB1 1445 aa14.82□□□□□ -0.04
COL4A5-204ENST00000477429 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
COL4A5-204ENST00000477429 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
COL4A5-204ENST00000477429 RGL3Q3MIN7 710 aa14.81□□□□□ -0.04
COL4A5-204ENST00000477429 KRT28Q7Z3Y7 464 aa14.81□□□□□ -0.04
COL4A5-204ENST00000477429 CAPN15O75808 1086 aa14.8□□□□□ -0.04
COL4A5-204ENST00000477429 ABCC11Q96J66 1382 aa14.8□□□□□ -0.04
COL4A5-204ENST00000477429 IFT172Q9UG01 1749 aa14.78□□□□□ -0.04
COL4A5-204ENST00000477429 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
COL4A5-204ENST00000477429 PIK3C2GO75747 1445 aa14.77□□□□□ -0.04
COL4A5-204ENST00000477429 YTHDC2Q9H6S0 1430 aaKnown RBP14.77□□□□□ -0.04
COL4A5-204ENST00000477429 FAM83GA6ND36 823 aa14.77□□□□□ -0.05
COL4A5-204ENST00000477429 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.05
COL4A5-204ENST00000477429 ONECUT3O60422 494 aaPredicted RBP14.77□□□□□ -0.05
COL4A5-204ENST00000477429 VPS72Q15906 364 aa14.77□□□□□ -0.05
COL4A5-204ENST00000477429 PLCH1Q4KWH8 1693 aa14.77□□□□□ -0.05
COL4A5-204ENST00000477429 KNDC1Q76NI1 1749 aa14.76□□□□□ -0.05
COL4A5-204ENST00000477429 ABCA3Q99758 1704 aa14.76□□□□□ -0.05
COL4A5-204ENST00000477429 EN1Q05925 392 aaPredicted RBP14.76□□□□□ -0.05
COL4A5-204ENST00000477429 CCDC144AA2RUR9 1427 aa14.75□□□□□ -0.05
COL4A5-204ENST00000477429 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
COL4A5-204ENST00000477429 BAG6P46379 1132 aa14.75□□□□□ -0.05
COL4A5-204ENST00000477429 FAM182BQ5T319 152 aa14.75□□□□□ -0.05
COL4A5-204ENST00000477429 KIF1AQ12756 1690 aa14.74□□□□□ -0.05
COL4A5-204ENST00000477429 SAFB2Q14151 953 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL4A5-204ENST00000477429 PHF8Q9UPP1 1060 aa14.74□□□□□ -0.05
COL4A5-204ENST00000477429 CHD4Q14839 1912 aa14.74□□□□□ -0.05
COL4A5-204ENST00000477429 NINLQ9Y2I6 1382 aa14.73□□□□□ -0.05
COL4A5-204ENST00000477429 CFAP70Q5T0N1 1121 aa14.73□□□□□ -0.05
COL4A5-204ENST00000477429 KRT27Q7Z3Y8 459 aa14.73□□□□□ -0.05
COL4A5-204ENST00000477429 NRXN1Q9ULB1 1477 aa14.72□□□□□ -0.05
COL4A5-204ENST00000477429 PMFBP1Q8TBY8 1022 aa14.72□□□□□ -0.05
COL4A5-204ENST00000477429 PCDH10Q9P2E7 1040 aa14.72□□□□□ -0.05
COL4A5-204ENST00000477429 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
COL4A5-204ENST00000477429 ANKRD30BQ9BXX2 1392 aa14.72□□□□□ -0.05
COL4A5-204ENST00000477429 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
COL4A5-204ENST00000477429 FAM98CQ17RN3 349 aaKnown RBP14.71□□□□□ -0.05
COL4A5-204ENST00000477429 LMOD2Q6P5Q4 547 aa14.71□□□□□ -0.05
COL4A5-204ENST00000477429 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
COL4A5-204ENST00000477429 NRAPQ86VF7 1730 aa14.71□□□□□ -0.05
COL4A5-204ENST00000477429 NWD2Q9ULI1 1742 aa14.7□□□□□ -0.06
COL4A5-204ENST00000477429 PRAM1Q96QH2 718 aa14.7□□□□□ -0.06
COL4A5-204ENST00000477429 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
COL4A5-204ENST00000477429 SBNO1A3KN83 1393 aa14.7□□□□□ -0.06
COL4A5-204ENST00000477429 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
COL4A5-204ENST00000477429 SIRT1Q96EB6 747 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms