RNA–Protein interactions for RNA: ENST00000474228.1

SPRED2-208, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 3

Gene SPRED2, Length 876 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-208ENST00000474228 COL22A1Q8NFW1 1626 aaPredicted RBP15.31■□□□□ 0.04
SPRED2-208ENST00000474228 PXDNQ92626 1479 aa15.3■□□□□ 0.04
SPRED2-208ENST00000474228 NAIPQ13075 1403 aa15.29■□□□□ 0.04
SPRED2-208ENST00000474228 FOXD1Q16676 465 aa15.29■□□□□ 0.04
SPRED2-208ENST00000474228 PLEKHH1Q9ULM0 1364 aa15.28■□□□□ 0.04
SPRED2-208ENST00000474228 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
SPRED2-208ENST00000474228 FOXO3O43524 673 aa15.27■□□□□ 0.04
SPRED2-208ENST00000474228 WAPLQ7Z5K2 1190 aa15.27■□□□□ 0.04
SPRED2-208ENST00000474228 PPLO60437 1756 aa15.26■□□□□ 0.03
SPRED2-208ENST00000474228 ADGRF5Q8IZF2 1346 aa15.26■□□□□ 0.03
SPRED2-208ENST00000474228 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
SPRED2-208ENST00000474228 STK26Q9P289 416 aa15.26■□□□□ 0.03
SPRED2-208ENST00000474228 GLI3P10071 1580 aa15.26■□□□□ 0.03
SPRED2-208ENST00000474228 PRAG1Q86YV5 1406 aa15.26■□□□□ 0.03
SPRED2-208ENST00000474228 HFM1A2PYH4 1435 aa15.25■□□□□ 0.03
SPRED2-208ENST00000474228 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
SPRED2-208ENST00000474228 MARF1Q9Y4F3 1742 aaKnown RBP15.24■□□□□ 0.03
SPRED2-208ENST00000474228 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
SPRED2-208ENST00000474228 VGFO15240 615 aaPredicted RBP15.23■□□□□ 0.03
SPRED2-208ENST00000474228 GJD4Q96KN9 370 aaPredicted RBP15.23■□□□□ 0.03
SPRED2-208ENST00000474228 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
SPRED2-208ENST00000474228 RALGAPBQ86X10 1494 aa15.22■□□□□ 0.03
SPRED2-208ENST00000474228 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
SPRED2-208ENST00000474228 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.03
SPRED2-208ENST00000474228 BRWD3Q6RI45 1802 aa15.21■□□□□ 0.03
SPRED2-208ENST00000474228 RRBP1Q9P2E9 1410 aaKnown RBP15.2■□□□□ 0.02
SPRED2-208ENST00000474228 CABLES1Q8TDN4 633 aa15.2■□□□□ 0.02
SPRED2-208ENST00000474228 SLIT2O94813 1529 aa15.19■□□□□ 0.02
SPRED2-208ENST00000474228 RGL3Q3MIN7 710 aa15.19■□□□□ 0.02
SPRED2-208ENST00000474228 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
SPRED2-208ENST00000474228 UNC5CLQ8IV45 518 aa15.17■□□□□ 0.02
SPRED2-208ENST00000474228 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
SPRED2-208ENST00000474228 FMN2Q9NZ56 1722 aa15.17■□□□□ 0.02
SPRED2-208ENST00000474228 USP32Q8NFA0 1604 aa15.17■□□□□ 0.02
SPRED2-208ENST00000474228 SPATA31A3Q5VYP0 1347 aa15.17■□□□□ 0.02
SPRED2-208ENST00000474228 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
SPRED2-208ENST00000474228 LRPPRCP42704 1394 aaKnown RBP15.15■□□□□ 0.02
SPRED2-208ENST00000474228 RGPD8O14715 1765 aaPredicted RBP15.15■□□□□ 0.02
SPRED2-208ENST00000474228 TECPR2O15040 1411 aa15.15■□□□□ 0.02
SPRED2-208ENST00000474228 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
SPRED2-208ENST00000474228 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
SPRED2-208ENST00000474228 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
SPRED2-208ENST00000474228 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
SPRED2-208ENST00000474228 PSDA5PKW4 1024 aaPredicted RBP15.13■□□□□ 0.01
SPRED2-208ENST00000474228 KNDC1Q76NI1 1749 aa15.13■□□□□ 0.01
SPRED2-208ENST00000474228 KRT28Q7Z3Y7 464 aa15.13■□□□□ 0.01
SPRED2-208ENST00000474228 PLCH1Q4KWH8 1693 aa15.12■□□□□ 0.01
SPRED2-208ENST00000474228 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
SPRED2-208ENST00000474228 SAFB2Q14151 953 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPRED2-208ENST00000474228 PIK3C2GO75747 1445 aa15.11■□□□□ 0.01
SPRED2-208ENST00000474228 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
SPRED2-208ENST00000474228 CCDC125Q86Z20 511 aa15.11■□□□□ 0.01
SPRED2-208ENST00000474228 ABCC11Q96J66 1382 aa15.11■□□□□ 0.01
SPRED2-208ENST00000474228 TNS3Q68CZ2 1445 aa15.1■□□□□ 0.01
SPRED2-208ENST00000474228 FAM182BQ5T319 152 aa15.1■□□□□ 0.01
SPRED2-208ENST00000474228 CCDC9Q9Y3X0 531 aaKnown RBP15.1■□□□□ 0.01
SPRED2-208ENST00000474228 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
SPRED2-208ENST00000474228 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
SPRED2-208ENST00000474228 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
SPRED2-208ENST00000474228 VPS72Q15906 364 aa15.08■□□□□ 0
SPRED2-208ENST00000474228 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0
SPRED2-208ENST00000474228 PHF8Q9UPP1 1060 aa15.08■□□□□ 0
SPRED2-208ENST00000474228 FAM83GA6ND36 823 aa15.07■□□□□ 0
SPRED2-208ENST00000474228 HAP1P54257 671 aaPredicted RBP15.07■□□□□ 0
SPRED2-208ENST00000474228 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
SPRED2-208ENST00000474228 NRAPQ86VF7 1730 aa15.06■□□□□ 0
SPRED2-208ENST00000474228 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
SPRED2-208ENST00000474228 NRXN1Q9ULB1 1477 aa15.06■□□□□ 0
SPRED2-208ENST00000474228 A0A0G2JS52 829 aa15.05■□□□□ -0
SPRED2-208ENST00000474228 MYT1Q01538 1121 aa15.05■□□□□ -0
SPRED2-208ENST00000474228 FAM98CQ17RN3 349 aaKnown RBP15.05■□□□□ -0
SPRED2-208ENST00000474228 LRP5O75197 1615 aa15.04■□□□□ -0
SPRED2-208ENST00000474228 ANKRD30BQ9BXX2 1392 aa15.04■□□□□ -0
SPRED2-208ENST00000474228 PRAM1Q96QH2 718 aa15.04■□□□□ -0
SPRED2-208ENST00000474228 MPHOSPH9Q99550 1183 aa15.04■□□□□ -0
SPRED2-208ENST00000474228 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
SPRED2-208ENST00000474228 ONECUT3O60422 494 aaPredicted RBP15.03■□□□□ -0
SPRED2-208ENST00000474228 EN1Q05925 392 aaPredicted RBP15.03■□□□□ -0
SPRED2-208ENST00000474228 SF3B2Q13435 895 aaKnown RBP15.03■□□□□ -0
SPRED2-208ENST00000474228 HIRIP3Q9BW71 556 aaPredicted RBP15.03■□□□□ -0
SPRED2-208ENST00000474228 SBNO1A3KN83 1393 aa15.02■□□□□ -0
SPRED2-208ENST00000474228 HRCP23327 699 aa15.02■□□□□ -0
SPRED2-208ENST00000474228 C14orf93Q9H972 538 aaKnown RBP15.02■□□□□ -0
SPRED2-208ENST00000474228 TRPM3Q9HCF6 1732 aaPredicted RBP15.02□□□□□ -0.01
SPRED2-208ENST00000474228 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
SPRED2-208ENST00000474228 BTG4Q9NY30 223 aa15.01□□□□□ -0.01
SPRED2-208ENST00000474228 PSME1Q06323 249 aa15□□□□□ -0.01
SPRED2-208ENST00000474228 ALS2Q96Q42 1657 aa14.98□□□□□ -0.01
SPRED2-208ENST00000474228 R3HDM1Q15032 1099 aaKnown RBP14.98□□□□□ -0.01
SPRED2-208ENST00000474228 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
SPRED2-208ENST00000474228 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
SPRED2-208ENST00000474228 BAG6P46379 1132 aa14.97□□□□□ -0.01
SPRED2-208ENST00000474228 SIRT1Q96EB6 747 aa14.97□□□□□ -0.01
SPRED2-208ENST00000474228 TNS1Q9HBL0 1735 aaKnown RBP14.97□□□□□ -0.01
SPRED2-208ENST00000474228 CRYBG1Q9Y4K1 1723 aa14.97□□□□□ -0.01
SPRED2-208ENST00000474228 ADGRB1O14514 1584 aa14.96□□□□□ -0.01
SPRED2-208ENST00000474228 EZH2Q15910 746 aaKnown RBP14.96□□□□□ -0.01
SPRED2-208ENST00000474228 TRAK1Q9UPV9 953 aa14.96□□□□□ -0.01
SPRED2-208ENST00000474228 THSD7AQ9UPZ6 1657 aa14.96□□□□□ -0.01
SPRED2-208ENST00000474228 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms