RNA–Protein interactions for RNA: ENST00000474228.1

SPRED2-208, Transcript of sprouty related EVH1 domain containing 2, humanhuman

TSL 3

Gene SPRED2, Length 876 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED2-208ENST00000474228 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
SPRED2-208ENST00000474228 ABCC9O60706 1549 aa23.56■■□□□ 1.36
SPRED2-208ENST00000474228 CCDC180Q9P1Z9 1646 aa23.07■■□□□ 1.28
SPRED2-208ENST00000474228 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
SPRED2-208ENST00000474228 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
SPRED2-208ENST00000474228 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
SPRED2-208ENST00000474228 NACADO15069 1562 aa21.88■■□□□ 1.09
SPRED2-208ENST00000474228 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
SPRED2-208ENST00000474228 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
SPRED2-208ENST00000474228 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
SPRED2-208ENST00000474228 MYO15BQ96JP2 1530 aa21.41■■□□□ 1.02
SPRED2-208ENST00000474228 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
SPRED2-208ENST00000474228 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
SPRED2-208ENST00000474228 SCRIBQ14160 1630 aa21.19■□□□□ 0.98
SPRED2-208ENST00000474228 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
SPRED2-208ENST00000474228 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.96
SPRED2-208ENST00000474228 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
SPRED2-208ENST00000474228 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
SPRED2-208ENST00000474228 DNAJC5Q9H3Z4 198 aa20.63■□□□□ 0.89
SPRED2-208ENST00000474228 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
SPRED2-208ENST00000474228 CUX2O14529 1486 aa20.24■□□□□ 0.83
SPRED2-208ENST00000474228 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
SPRED2-208ENST00000474228 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
SPRED2-208ENST00000474228 NESP48681 1621 aa20.2■□□□□ 0.82
SPRED2-208ENST00000474228 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
SPRED2-208ENST00000474228 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
SPRED2-208ENST00000474228 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
SPRED2-208ENST00000474228 THOC2Q8NI27 1593 aaKnown RBP19.96■□□□□ 0.79
SPRED2-208ENST00000474228 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
SPRED2-208ENST00000474228 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
SPRED2-208ENST00000474228 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
SPRED2-208ENST00000474228 KIF21AQ7Z4S6 1674 aa19.85■□□□□ 0.77
SPRED2-208ENST00000474228 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
SPRED2-208ENST00000474228 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
SPRED2-208ENST00000474228 TRIM41Q8WV44 630 aa19.72■□□□□ 0.75
SPRED2-208ENST00000474228 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
SPRED2-208ENST00000474228 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
SPRED2-208ENST00000474228 WIZO95785 1651 aa19.62■□□□□ 0.73
SPRED2-208ENST00000474228 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
SPRED2-208ENST00000474228 WDR62O43379 1518 aa19.58■□□□□ 0.73
SPRED2-208ENST00000474228 CEP164Q9UPV0 1460 aa19.47■□□□□ 0.71
SPRED2-208ENST00000474228 FANCD2Q9BXW9 1451 aa19.45■□□□□ 0.7
SPRED2-208ENST00000474228 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
SPRED2-208ENST00000474228 CFTRP13569 1480 aa19.35■□□□□ 0.69
SPRED2-208ENST00000474228 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
SPRED2-208ENST00000474228 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
SPRED2-208ENST00000474228 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
SPRED2-208ENST00000474228 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
SPRED2-208ENST00000474228 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
SPRED2-208ENST00000474228 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
SPRED2-208ENST00000474228 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
SPRED2-208ENST00000474228 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
SPRED2-208ENST00000474228 PRDM2Q13029 1718 aa19.08■□□□□ 0.65
SPRED2-208ENST00000474228 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
SPRED2-208ENST00000474228 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
SPRED2-208ENST00000474228 IFT140Q96RY7 1462 aa19.06■□□□□ 0.64
SPRED2-208ENST00000474228 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
SPRED2-208ENST00000474228 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.637e-9■■■■□ 23.9
SPRED2-208ENST00000474228 CYB5RLQ6IPT4 315 aa18.96■□□□□ 0.63
SPRED2-208ENST00000474228 CHD1O14646 1710 aa18.94■□□□□ 0.62
SPRED2-208ENST00000474228 DNMBPQ6XZF7 1577 aa18.92■□□□□ 0.62
SPRED2-208ENST00000474228 ARAP1Q96P48 1450 aa18.91■□□□□ 0.62
SPRED2-208ENST00000474228 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
SPRED2-208ENST00000474228 FBLN2P98095 1184 aa18.87■□□□□ 0.61
SPRED2-208ENST00000474228 RAD54L2Q9Y4B4 1467 aa18.87■□□□□ 0.61
SPRED2-208ENST00000474228 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
SPRED2-208ENST00000474228 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
SPRED2-208ENST00000474228 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
SPRED2-208ENST00000474228 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
SPRED2-208ENST00000474228 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
SPRED2-208ENST00000474228 SOGA1O94964 1423 aa18.73■□□□□ 0.59
SPRED2-208ENST00000474228 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
SPRED2-208ENST00000474228 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
SPRED2-208ENST00000474228 CUX1P39880 1505 aa18.68■□□□□ 0.58
SPRED2-208ENST00000474228 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
SPRED2-208ENST00000474228 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
SPRED2-208ENST00000474228 GRIN2BQ13224 1484 aa18.57■□□□□ 0.56
SPRED2-208ENST00000474228 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
SPRED2-208ENST00000474228 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
SPRED2-208ENST00000474228 SYNJ2O15056 1496 aa18.54■□□□□ 0.56
SPRED2-208ENST00000474228 PBRM1Q86U86 1689 aa18.53■□□□□ 0.56
SPRED2-208ENST00000474228 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
SPRED2-208ENST00000474228 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
SPRED2-208ENST00000474228 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
SPRED2-208ENST00000474228 ABCA10Q8WWZ4 1543 aa18.42■□□□□ 0.54
SPRED2-208ENST00000474228 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
SPRED2-208ENST00000474228 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
SPRED2-208ENST00000474228 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
SPRED2-208ENST00000474228 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
SPRED2-208ENST00000474228 NUP160Q12769 1436 aa18.32■□□□□ 0.52
SPRED2-208ENST00000474228 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
SPRED2-208ENST00000474228 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
SPRED2-208ENST00000474228 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
SPRED2-208ENST00000474228 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
SPRED2-208ENST00000474228 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
SPRED2-208ENST00000474228 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
SPRED2-208ENST00000474228 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
SPRED2-208ENST00000474228 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
SPRED2-208ENST00000474228 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
SPRED2-208ENST00000474228 JPH4Q96JJ6 628 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms