RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 ROBO2Q9HCK4 1378 aa37.72■■■■□ 3.63
HOXB3-207ENST00000472863 FAM135BQ49AJ0 1406 aa37.71■■■■□ 3.63
HOXB3-207ENST00000472863 AMOTL2Q9Y2J4 779 aa37.71■■■■□ 3.63
HOXB3-207ENST00000472863 CCER2I3L3R5 266 aa37.71■■■■□ 3.63
HOXB3-207ENST00000472863 CPS1P31327 1500 aa37.71■■■■□ 3.63
HOXB3-207ENST00000472863 PUS7Q96PZ0 661 aaKnown RBP37.69■■■■□ 3.62
HOXB3-207ENST00000472863 NCKAP5LQ9HCH0 1330 aa37.69■■■■□ 3.62
HOXB3-207ENST00000472863 SRPK2P78362 688 aaKnown RBP37.67■■■■□ 3.62
HOXB3-207ENST00000472863 TMC1Q8TDI8 760 aa37.67■■■■□ 3.62
HOXB3-207ENST00000472863 SLC12A5Q9H2X9 1139 aa37.66■■■■□ 3.62
HOXB3-207ENST00000472863 CDK19Q9BWU1 502 aa37.65■■■■□ 3.62
HOXB3-207ENST00000472863 NPHP4O75161 1426 aaPredicted RBP37.63■■■■□ 3.61
HOXB3-207ENST00000472863 YTHDC1Q96MU7 727 aaKnown RBP37.59■■■■□ 3.61
HOXB3-207ENST00000472863 PIK3R4Q99570 1358 aa37.59■■■■□ 3.61
HOXB3-207ENST00000472863 KNSTRNQ9Y448 316 aa37.58■■■■□ 3.61
HOXB3-207ENST00000472863 HSPA2P54652 639 aa37.57■■■■□ 3.61
HOXB3-207ENST00000472863 CARD14Q9BXL6 1004 aa37.57■■■■□ 3.61
HOXB3-207ENST00000472863 KCNA6P17658 529 aa37.56■■■■□ 3.6
HOXB3-207ENST00000472863 CC2D1BQ5T0F9 858 aaKnown RBP37.56■■■■□ 3.6
HOXB3-207ENST00000472863 WASLO00401 505 aaPredicted RBP37.55■■■■□ 3.6
HOXB3-207ENST00000472863 CCDC184Q52MB2 194 aa37.55■■■■□ 3.6
HOXB3-207ENST00000472863 XRN1Q8IZH2 1706 aaKnown RBP37.53■■■■□ 3.6
HOXB3-207ENST00000472863 ATAD2Q6PL18 1390 aa37.53■■■■□ 3.6
HOXB3-207ENST00000472863 KTN1Q86UP2 1357 aaKnown RBP37.53■■■■□ 3.6
HOXB3-207ENST00000472863 PTCH1Q13635 1447 aa37.52■■■■□ 3.6
HOXB3-207ENST00000472863 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.52■■■■□ 3.6
HOXB3-207ENST00000472863 AMER1Q5JTC6 1135 aaPredicted RBP37.51■■■■□ 3.6
HOXB3-207ENST00000472863 RALBP1Q15311 655 aa37.5■■■■□ 3.59
HOXB3-207ENST00000472863 CHD2O14647 1828 aaKnown RBP37.49■■■■□ 3.59
HOXB3-207ENST00000472863 PARD3Q8TEW0 1356 aa37.46■■■■□ 3.59
HOXB3-207ENST00000472863 LMTK3Q96Q04 1460 aa37.46■■■■□ 3.59
HOXB3-207ENST00000472863 CABP1Q9NZU7 370 aa37.44■■■■□ 3.58
HOXB3-207ENST00000472863 NINLQ9Y2I6 1382 aa37.44■■■■□ 3.58
HOXB3-207ENST00000472863 ANKRD36BQ8N2N9 1353 aa37.43■■■■□ 3.58
HOXB3-207ENST00000472863 MRS2Q9HD23 443 aa37.42■■■■□ 3.58
HOXB3-207ENST00000472863 NSD3Q9BZ95 1437 aa37.41■■■■□ 3.58
HOXB3-207ENST00000472863 NUDT16Q96DE0 195 aaKnown RBP37.4■■■■□ 3.58
HOXB3-207ENST00000472863 ADGRB2O60241 1585 aa37.4■■■■□ 3.58
HOXB3-207ENST00000472863 MYBBP1AQ9BQG0 1328 aaKnown RBP37.39■■■■□ 3.58
HOXB3-207ENST00000472863 A0A1W2PP64 1363 aa37.38■■■■□ 3.57
HOXB3-207ENST00000472863 NPC1L1Q9UHC9 1359 aa37.37■■■■□ 3.57
HOXB3-207ENST00000472863 CD163L1Q9NR16 1453 aa37.36■■■■□ 3.57
HOXB3-207ENST00000472863 RBM33Q96EV2 1170 aaKnown RBP37.36■■■■□ 3.57
HOXB3-207ENST00000472863 PRR36Q9H6K5 1346 aa37.35■■■■□ 3.57
HOXB3-207ENST00000472863 TERF2IPQ9NYB0 399 aa37.35■■■■□ 3.57
HOXB3-207ENST00000472863 NUTM2FA1L443 756 aa37.34■■■■□ 3.57
HOXB3-207ENST00000472863 CCDC61Q9Y6R9 512 aa37.34■■■■□ 3.57
HOXB3-207ENST00000472863 PPIP5K1Q6PFW1 1433 aa37.32■■■■□ 3.56
HOXB3-207ENST00000472863 ATP7BP35670 1465 aa37.3■■■■□ 3.56
HOXB3-207ENST00000472863 HDGFL2Q7Z4V5 671 aaPredicted RBP37.3■■■■□ 3.56
HOXB3-207ENST00000472863 NLRP13Q86W25 1043 aa37.27■■■■□ 3.56
HOXB3-207ENST00000472863 CGNL1Q0VF96 1302 aa37.26■■■■□ 3.56
HOXB3-207ENST00000472863 STRCQ7RTU9 1775 aa37.25■■■■□ 3.55
HOXB3-207ENST00000472863 BRD4O60885 1362 aaPredicted RBP37.24■■■■□ 3.55
HOXB3-207ENST00000472863 NWD1Q149M9 1564 aa37.24■■■■□ 3.55
HOXB3-207ENST00000472863 FAM9BQ8IZU0 186 aa37.23■■■■□ 3.55
HOXB3-207ENST00000472863 USP32Q8NFA0 1604 aa37.22■■■■□ 3.55
HOXB3-207ENST00000472863 PPP2R1AP30153 589 aa37.22■■■■□ 3.55
HOXB3-207ENST00000472863 CPSF1Q10570 1443 aaKnown RBP37.2■■■■□ 3.55
HOXB3-207ENST00000472863 NALCNQ8IZF0 1738 aa37.19■■■■□ 3.54
HOXB3-207ENST00000472863 PROSER2Q86WR7 435 aaPredicted RBP37.18■■■■□ 3.54
HOXB3-207ENST00000472863 MORC1Q86VD1 984 aa37.16■■■■□ 3.54
HOXB3-207ENST00000472863 CDC42BPGQ6DT37 1551 aa37.15■■■■□ 3.54
HOXB3-207ENST00000472863 PLEKHG3A1L390 1219 aa37.15■■■■□ 3.54
HOXB3-207ENST00000472863 PNISRQ8TF01 805 aaKnown RBP37.15■■■■□ 3.54
HOXB3-207ENST00000472863 TOPAZ1Q8N9V7 1692 aa37.15■■■■□ 3.54
HOXB3-207ENST00000472863 FYB1O15117 783 aa37.14■■■■□ 3.54
HOXB3-207ENST00000472863 C14orf37Q86TY3 774 aa37.14■■■■□ 3.54
HOXB3-207ENST00000472863 ADGRL3Q9HAR2 1447 aa37.13■■■■□ 3.53
HOXB3-207ENST00000472863 RGPD8O14715 1765 aaPredicted RBP37.13■■■■□ 3.53
HOXB3-207ENST00000472863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.12■■■■□ 3.53
HOXB3-207ENST00000472863 GGNBP2Q9H3C7 697 aa37.12■■■■□ 3.53
HOXB3-207ENST00000472863 STRCP1A6NGW2 1772 aa37.12■■■■□ 3.53
HOXB3-207ENST00000472863 NSD2O96028 1365 aa37.11■■■■□ 3.53
HOXB3-207ENST00000472863 ACEP12821 1306 aa37.11■■■■□ 3.53
HOXB3-207ENST00000472863 TNNT2P45379 298 aaPredicted RBP37.11■■■■□ 3.53
HOXB3-207ENST00000472863 FMN2Q9NZ56 1722 aa37.1■■■■□ 3.53
HOXB3-207ENST00000472863 NKTRP30414 1462 aaKnown RBP37.1■■■■□ 3.53
HOXB3-207ENST00000472863 CENPBP07199 599 aaPredicted RBP37.1■■■■□ 3.53
HOXB3-207ENST00000472863 PMFBP1Q8TBY8 1022 aa37.1■■■■□ 3.53
HOXB3-207ENST00000472863 ZNF692Q9BU19 519 aaPredicted RBP37.1■■■■□ 3.53
HOXB3-207ENST00000472863 AKAP12Q02952 1782 aa37.07■■■■□ 3.53
HOXB3-207ENST00000472863 ANKARQ7Z5J8 1434 aa37.07■■■■□ 3.52
HOXB3-207ENST00000472863 ITSN1Q15811 1721 aa37.06■■■■□ 3.52
HOXB3-207ENST00000472863 EDC4Q6P2E9 1401 aaKnown RBP37.06■■■■□ 3.52
HOXB3-207ENST00000472863 MON2Q7Z3U7 1717 aa37.04■■■■□ 3.52
HOXB3-207ENST00000472863 TMEM94Q12767 1356 aa37.01■■■■□ 3.52
HOXB3-207ENST00000472863 NGDNQ8NEJ9 315 aaKnown RBP37■■■■□ 3.51
HOXB3-207ENST00000472863 HNRNPUQ00839 825 aaKnown RBP eCLIP36.99■■■■□ 3.51
HOXB3-207ENST00000472863 NME9Q86XW9 330 aa36.99■■■■□ 3.51
HOXB3-207ENST00000472863 KIF20BQ96Q89 1820 aa36.99■■■■□ 3.51
HOXB3-207ENST00000472863 C19orf44Q9H6X5 657 aa36.98■■■■□ 3.51
HOXB3-207ENST00000472863 POLR3AO14802 1390 aaPredicted RBP36.97■■■■□ 3.51
HOXB3-207ENST00000472863 USP6P35125 1406 aa36.97■■■■□ 3.51
HOXB3-207ENST00000472863 ZRANB1Q9UGI0 708 aa36.96■■■■□ 3.51
HOXB3-207ENST00000472863 ANKRD26Q9UPS8 1709 aa36.96■■■■□ 3.51
HOXB3-207ENST00000472863 ZNF335Q9H4Z2 1342 aaPredicted RBP36.95■■■■□ 3.51
HOXB3-207ENST00000472863 TTC21BQ7Z4L5 1316 aa36.94■■■■□ 3.5
HOXB3-207ENST00000472863 MTHFSP49914 203 aa36.92■■■■□ 3.5
HOXB3-207ENST00000472863 PHF8Q9UPP1 1060 aa36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms