RNA–Protein interactions for RNA: ENST00000471993.1

AC078828.1-201, humanhuman

TSL 3 BASIC

Gene AC078828.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078828.1-201ENST00000471993 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
AC078828.1-201ENST00000471993 GCGRP47871 477 aa13.15□□□□□ -0.3
AC078828.1-201ENST00000471993 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
AC078828.1-201ENST00000471993 SEMA3EO15041 775 aa13.14□□□□□ -0.31
AC078828.1-201ENST00000471993 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
AC078828.1-201ENST00000471993 FECHP22830 423 aa13.12□□□□□ -0.31
AC078828.1-201ENST00000471993 TRIM32Q13049 653 aa13.12□□□□□ -0.31
AC078828.1-201ENST00000471993 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
AC078828.1-201ENST00000471993 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
AC078828.1-201ENST00000471993 MRGPRX2Q96LB1 330 aa13.11□□□□□ -0.31
AC078828.1-201ENST00000471993 J3QL48 77 aa13.09□□□□□ -0.31
AC078828.1-201ENST00000471993 GNPATO15228 680 aa13.09□□□□□ -0.31
AC078828.1-201ENST00000471993 P3H3Q8IVL6 736 aa13.09□□□□□ -0.31
AC078828.1-201ENST00000471993 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
AC078828.1-201ENST00000471993 GPR37O15354 613 aa13.08□□□□□ -0.32
AC078828.1-201ENST00000471993 MMP16P51512 607 aa13.08□□□□□ -0.32
AC078828.1-201ENST00000471993 NLRP7Q8WX94 980 aa13.08□□□□□ -0.32
AC078828.1-201ENST00000471993 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
AC078828.1-201ENST00000471993 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
AC078828.1-201ENST00000471993 HPS1Q92902 700 aa13.05□□□□□ -0.32
AC078828.1-201ENST00000471993 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
AC078828.1-201ENST00000471993 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
AC078828.1-201ENST00000471993 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
AC078828.1-201ENST00000471993 Q3C1V9 767 aa13.01□□□□□ -0.33
AC078828.1-201ENST00000471993 DXOO77932 396 aaKnown RBP13□□□□□ -0.33
AC078828.1-201ENST00000471993 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
AC078828.1-201ENST00000471993 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
AC078828.1-201ENST00000471993 WNT7BP56706 349 aa12.95□□□□□ -0.34
AC078828.1-201ENST00000471993 SKOR1P84550 965 aa12.95□□□□□ -0.34
AC078828.1-201ENST00000471993 RC3H1Q5TC82 1133 aaKnown RBP12.95□□□□□ -0.34
AC078828.1-201ENST00000471993 USB1Q9BQ65 265 aaKnown RBP12.95□□□□□ -0.34
AC078828.1-201ENST00000471993 FAM181BA6NEQ2 426 aa12.94□□□□□ -0.34
AC078828.1-201ENST00000471993 LORP23490 312 aaPredicted RBP12.94□□□□□ -0.34
AC078828.1-201ENST00000471993 SLC16A10Q8TF71 515 aa12.94□□□□□ -0.34
AC078828.1-201ENST00000471993 NXF1Q9UBU9 619 aaKnown RBP12.93□□□□□ -0.34
AC078828.1-201ENST00000471993 SMYD5Q6GMV2 418 aa12.92□□□□□ -0.34
AC078828.1-201ENST00000471993 CD46P15529 392 aa12.91□□□□□ -0.34
AC078828.1-201ENST00000471993 GMPRP36959 345 aa12.9□□□□□ -0.34
AC078828.1-201ENST00000471993 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
AC078828.1-201ENST00000471993 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
AC078828.1-201ENST00000471993 LOC100996750A0A140TA64 210 aa12.88□□□□□ -0.35
AC078828.1-201ENST00000471993 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
AC078828.1-201ENST00000471993 KRTAP4-6Q9BYQ5 205 aa12.88□□□□□ -0.35
AC078828.1-201ENST00000471993 KDM4AO75164 1064 aa12.87□□□□□ -0.35
AC078828.1-201ENST00000471993 ALDH1A1P00352 501 aa12.87□□□□□ -0.35
AC078828.1-201ENST00000471993 ZSCAN1Q8NBB4 408 aa12.87□□□□□ -0.35
AC078828.1-201ENST00000471993 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
AC078828.1-201ENST00000471993 IRF7Q92985 503 aa12.86□□□□□ -0.35
AC078828.1-201ENST00000471993 SIAH2O43255 324 aa12.84□□□□□ -0.35
AC078828.1-201ENST00000471993 BMP1P13497 986 aa12.84□□□□□ -0.35
AC078828.1-201ENST00000471993 HLA-CQ95604 372 aa12.84□□□□□ -0.35
AC078828.1-201ENST00000471993 BCANQ96GW7 911 aa12.84□□□□□ -0.35
AC078828.1-201ENST00000471993 H3BM21 787 aa12.83□□□□□ -0.36
AC078828.1-201ENST00000471993 USP46P62068 366 aa12.82□□□□□ -0.36
AC078828.1-201ENST00000471993 JUNDP17535 347 aa12.8□□□□□ -0.36
AC078828.1-201ENST00000471993 CAPN5O15484 640 aaPredicted RBP12.79□□□□□ -0.36
AC078828.1-201ENST00000471993 HOXA2O43364 376 aa12.79□□□□□ -0.36
AC078828.1-201ENST00000471993 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
AC078828.1-201ENST00000471993 VEGFBP49765 207 aa12.78□□□□□ -0.36
AC078828.1-201ENST00000471993 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
AC078828.1-201ENST00000471993 EHBP1Q8NDI1 1231 aa12.77□□□□□ -0.37
AC078828.1-201ENST00000471993 PTCRAQ6ISU1 281 aaPredicted RBP12.75□□□□□ -0.37
AC078828.1-201ENST00000471993 WASF2Q9Y6W5 498 aa12.75□□□□□ -0.37
AC078828.1-201ENST00000471993 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
AC078828.1-201ENST00000471993 GUCA2AQ02747 115 aa12.73□□□□□ -0.37
AC078828.1-201ENST00000471993 NUDT12Q9BQG2 462 aa12.73□□□□□ -0.37
AC078828.1-201ENST00000471993 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
AC078828.1-201ENST00000471993 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
AC078828.1-201ENST00000471993 ZFP42Q96MM3 310 aa12.71□□□□□ -0.37
AC078828.1-201ENST00000471993 SH3BP2P78314 561 aa12.69□□□□□ -0.38
AC078828.1-201ENST00000471993 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
AC078828.1-201ENST00000471993 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
AC078828.1-201ENST00000471993 VSIG8P0DPA2 414 aa12.66□□□□□ -0.38
AC078828.1-201ENST00000471993 KDM2AQ9Y2K7 1162 aa12.66□□□□□ -0.38
AC078828.1-201ENST00000471993 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
AC078828.1-201ENST00000471993 IRF6O14896 467 aa12.63□□□□□ -0.39
AC078828.1-201ENST00000471993 CCNYL3P0C7X3 344 aa12.63□□□□□ -0.39
AC078828.1-201ENST00000471993 MS4A1P11836 297 aa12.61□□□□□ -0.39
AC078828.1-201ENST00000471993 MRPL14Q6P1L8 145 aaKnown RBP12.61□□□□□ -0.39
AC078828.1-201ENST00000471993 MPNDQ8N594 471 aa12.61□□□□□ -0.39
AC078828.1-201ENST00000471993 SUZ12Q15022 739 aaKnown RBP12.6□□□□□ -0.39
AC078828.1-201ENST00000471993 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
AC078828.1-201ENST00000471993 UNC93B1Q9H1C4 597 aa12.6□□□□□ -0.39
AC078828.1-201ENST00000471993 NNTQ13423 1086 aa12.59□□□□□ -0.39
AC078828.1-201ENST00000471993 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
AC078828.1-201ENST00000471993 PCDHGC3Q9UN70 934 aa12.59□□□□□ -0.39
AC078828.1-201ENST00000471993 TIMP2P16035 220 aa12.58□□□□□ -0.4
AC078828.1-201ENST00000471993 PTPRNQ16849 979 aa12.58□□□□□ -0.4
AC078828.1-201ENST00000471993 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
AC078828.1-201ENST00000471993 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
AC078828.1-201ENST00000471993 PLEKHG3A1L390 1219 aa12.56□□□□□ -0.4
AC078828.1-201ENST00000471993 SCARF1Q14162 830 aa12.56□□□□□ -0.4
AC078828.1-201ENST00000471993 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
AC078828.1-201ENST00000471993 EVA1BQ9NVM1 165 aa12.56□□□□□ -0.4
AC078828.1-201ENST00000471993 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
AC078828.1-201ENST00000471993 ADH1CP00326 375 aa12.55□□□□□ -0.4
AC078828.1-201ENST00000471993 FDX1P10109 184 aa12.55□□□□□ -0.4
AC078828.1-201ENST00000471993 VARSP26640 1264 aaKnown RBP12.55□□□□□ -0.4
AC078828.1-201ENST00000471993 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
AC078828.1-201ENST00000471993 ZNF511Q8NB15 262 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms