RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
RRP1-202ENST00000471909 A2ML1A8K2U0 1454 aa23.01■■□□□ 1.27
RRP1-202ENST00000471909 CABP2Q9NPB3 220 aa23.01■■□□□ 1.27
RRP1-202ENST00000471909 PTPRMP28827 1452 aa23■■□□□ 1.27
RRP1-202ENST00000471909 YTHDC2Q9H6S0 1430 aaKnown RBP23■■□□□ 1.27
RRP1-202ENST00000471909 RCAN3Q9UKA8 241 aa23■■□□□ 1.27
RRP1-202ENST00000471909 ALKQ9UM73 1620 aa22.99■■□□□ 1.27
RRP1-202ENST00000471909 PLEKHH1Q9ULM0 1364 aa22.97■■□□□ 1.27
RRP1-202ENST00000471909 PRAM1Q96QH2 718 aa22.97■■□□□ 1.27
RRP1-202ENST00000471909 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
RRP1-202ENST00000471909 NOP58Q9Y2X3 529 aaKnown RBP22.97■■□□□ 1.27
RRP1-202ENST00000471909 ZMYM3Q14202 1370 aa22.96■■□□□ 1.27
RRP1-202ENST00000471909 ANKRD36BQ8N2N9 1353 aa22.96■■□□□ 1.27
RRP1-202ENST00000471909 RRP1P56182 461 aaKnown RBP22.96■■□□□ 1.27
RRP1-202ENST00000471909 RIMS2Q9UQ26 1411 aa22.95■■□□□ 1.26
RRP1-202ENST00000471909 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
RRP1-202ENST00000471909 USP32Q8NFA0 1604 aa22.94■■□□□ 1.26
RRP1-202ENST00000471909 CGNL1Q0VF96 1302 aa22.94■■□□□ 1.26
RRP1-202ENST00000471909 POLR3AO14802 1390 aaPredicted RBP22.94■■□□□ 1.26
RRP1-202ENST00000471909 POGKQ9P215 609 aa22.93■■□□□ 1.26
RRP1-202ENST00000471909 PRKCSHP14314 528 aaPredicted RBP22.93■■□□□ 1.26
RRP1-202ENST00000471909 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
RRP1-202ENST00000471909 MINK1Q8N4C8 1332 aaPredicted RBP22.93■■□□□ 1.26
RRP1-202ENST00000471909 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
RRP1-202ENST00000471909 DEKP35659 375 aaKnown RBP22.92■■□□□ 1.26
RRP1-202ENST00000471909 SRPK2P78362 688 aaKnown RBP22.92■■□□□ 1.26
RRP1-202ENST00000471909 TNNT2P45379 298 aaPredicted RBP22.92■■□□□ 1.26
RRP1-202ENST00000471909 NINLQ9Y2I6 1382 aa22.89■■□□□ 1.26
RRP1-202ENST00000471909 CCDC136Q96JN2 1154 aa22.88■■□□□ 1.25
RRP1-202ENST00000471909 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
RRP1-202ENST00000471909 APAF1O14727 1248 aa22.87■■□□□ 1.25
RRP1-202ENST00000471909 ATAD2Q6PL18 1390 aa22.87■■□□□ 1.25
RRP1-202ENST00000471909 NSD2O96028 1365 aa22.86■■□□□ 1.25
RRP1-202ENST00000471909 DUSP27Q5VZP5 1158 aa22.86■■□□□ 1.25
RRP1-202ENST00000471909 GOLGA2Q08379 1002 aa22.85■■□□□ 1.25
RRP1-202ENST00000471909 ABCC11Q96J66 1382 aa22.84■■□□□ 1.25
RRP1-202ENST00000471909 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
RRP1-202ENST00000471909 MTHFSP49914 203 aa22.84■■□□□ 1.25
RRP1-202ENST00000471909 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
RRP1-202ENST00000471909 SETD1AO15047 1707 aaKnown RBP22.84■■□□□ 1.25
RRP1-202ENST00000471909 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.83■■□□□ 1.25
RRP1-202ENST00000471909 DLC1Q96QB1 1528 aa22.83■■□□□ 1.25
RRP1-202ENST00000471909 TNRQ92752 1358 aa22.83■■□□□ 1.25
RRP1-202ENST00000471909 ANP32AP39687 249 aaKnown RBP22.83■■□□□ 1.25
RRP1-202ENST00000471909 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
RRP1-202ENST00000471909 CD163L1Q9NR16 1453 aa22.82■■□□□ 1.24
RRP1-202ENST00000471909 NBR1Q14596 966 aa22.82■■□□□ 1.24
RRP1-202ENST00000471909 EXOC6Q8TAG9 804 aa22.82■■□□□ 1.24
RRP1-202ENST00000471909 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
RRP1-202ENST00000471909 SHPRHQ149N8 1683 aa22.81■■□□□ 1.24
RRP1-202ENST00000471909 SLFN5Q08AF3 891 aa22.81■■□□□ 1.24
RRP1-202ENST00000471909 TERF2IPQ9NYB0 399 aa22.81■■□□□ 1.24
RRP1-202ENST00000471909 PLIN1O60240 522 aa22.79■■□□□ 1.24
RRP1-202ENST00000471909 METP08581 1390 aa22.79■■□□□ 1.24
RRP1-202ENST00000471909 TRMT2AQ8IZ69 625 aaKnown RBP22.79■■□□□ 1.24
RRP1-202ENST00000471909 IPO9Q96P70 1041 aaKnown RBP22.78■■□□□ 1.24
RRP1-202ENST00000471909 SPINK5Q9NQ38 1064 aaPredicted RBP22.78■■□□□ 1.24
RRP1-202ENST00000471909 NGEFQ8N5V2 710 aa22.77■■□□□ 1.24
RRP1-202ENST00000471909 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.24
RRP1-202ENST00000471909 CABP1Q9NZU7 370 aa22.77■■□□□ 1.24
RRP1-202ENST00000471909 CFAP53Q96M91 514 aa22.77■■□□□ 1.24
RRP1-202ENST00000471909 FYB1O15117 783 aa22.76■■□□□ 1.23
RRP1-202ENST00000471909 HDGFP51858 240 aaKnown RBP22.75■■□□□ 1.23
RRP1-202ENST00000471909 TMEM2Q9UHN6 1383 aa22.75■■□□□ 1.23
RRP1-202ENST00000471909 DMRT2Q9Y5R5 561 aa22.74■■□□□ 1.23
RRP1-202ENST00000471909 NLRP1Q9C000 1473 aa22.74■■□□□ 1.23
RRP1-202ENST00000471909 HDGFL2Q7Z4V5 671 aaPredicted RBP22.74■■□□□ 1.23
RRP1-202ENST00000471909 RUNDC1Q96C34 613 aa22.73■■□□□ 1.23
RRP1-202ENST00000471909 TXNDC2Q86VQ3 553 aa22.72■■□□□ 1.23
RRP1-202ENST00000471909 ZBTB47Q9UFB7 747 aaPredicted RBP22.72■■□□□ 1.23
RRP1-202ENST00000471909 MED14O60244 1454 aa22.71■■□□□ 1.23
RRP1-202ENST00000471909 UBR1Q8IWV7 1749 aa22.71■■□□□ 1.23
RRP1-202ENST00000471909 E9PSI1 815 aa22.71■■□□□ 1.23
RRP1-202ENST00000471909 WWC1Q8IX03 1113 aa22.71■■□□□ 1.23
RRP1-202ENST00000471909 CEBPAP49715 358 aaPredicted RBP22.7■■□□□ 1.22
RRP1-202ENST00000471909 IQSEC2Q5JU85 1478 aa22.69■■□□□ 1.22
RRP1-202ENST00000471909 TCP11L2Q8N4U5 519 aa22.69■■□□□ 1.22
RRP1-202ENST00000471909 RTL5Q5HYW3 569 aaPredicted RBP22.69■■□□□ 1.22
RRP1-202ENST00000471909 NKTRP30414 1462 aaKnown RBP22.68■■□□□ 1.22
RRP1-202ENST00000471909 WASLO00401 505 aaPredicted RBP22.68■■□□□ 1.22
RRP1-202ENST00000471909 C20orf194Q5TEA3 1177 aa22.68■■□□□ 1.22
RRP1-202ENST00000471909 CRBNQ96SW2 442 aa22.68■■□□□ 1.22
RRP1-202ENST00000471909 TECPR2O15040 1411 aa22.68■■□□□ 1.22
RRP1-202ENST00000471909 RRP7AQ9Y3A4 280 aaKnown RBP22.68■■□□□ 1.22
RRP1-202ENST00000471909 SIRT1Q96EB6 747 aa22.67■■□□□ 1.22
RRP1-202ENST00000471909 FAM135BQ49AJ0 1406 aa22.67■■□□□ 1.22
RRP1-202ENST00000471909 U2AF1L5P0DN76 240 aaPredicted RBP22.66■■□□□ 1.22
RRP1-202ENST00000471909 ATP7BP35670 1465 aa22.66■■□□□ 1.22
RRP1-202ENST00000471909 U2AF1Q01081 240 aaKnown RBP eCLIP22.66■■□□□ 1.22
RRP1-202ENST00000471909 NEUROD2Q15784 382 aa22.66■■□□□ 1.22
RRP1-202ENST00000471909 PHF23Q9BUL5 403 aaPredicted RBP22.66■■□□□ 1.22
RRP1-202ENST00000471909 ANKRD26Q9UPS8 1709 aa22.65■■□□□ 1.22
RRP1-202ENST00000471909 LTKP29376 864 aa22.65■■□□□ 1.22
RRP1-202ENST00000471909 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
RRP1-202ENST00000471909 KNDC1Q76NI1 1749 aa22.64■■□□□ 1.21
RRP1-202ENST00000471909 COL3A1P02461 1466 aaPredicted RBP22.64■■□□□ 1.21
RRP1-202ENST00000471909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
RRP1-202ENST00000471909 CPS1P31327 1500 aa22.62■■□□□ 1.21
RRP1-202ENST00000471909 PPIP5K1Q6PFW1 1433 aa22.62■■□□□ 1.21
RRP1-202ENST00000471909 CPSF1Q10570 1443 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms