RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ZNF644Q9H582 1327 aaPredicted RBP9.83□□□□□ -0.84
VAMP3-202ENST00000470357 HFM1A2PYH4 1435 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 SETD5Q9C0A6 1442 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 CAMSAP1Q5T5Y3 1602 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 UBAP1LF5GYI3 381 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 TSPY4P0CV99 314 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 TSPY10P0CW01 314 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 ZMYM3Q14202 1370 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 ADGRL2O95490 1459 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 MBD5Q9P267 1494 aa9.83□□□□□ -0.84
VAMP3-202ENST00000470357 NPATQ14207 1427 aa9.82□□□□□ -0.84
VAMP3-202ENST00000470357 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
VAMP3-202ENST00000470357 LCE2DQ5TA82 110 aaPredicted RBP9.82□□□□□ -0.84
VAMP3-202ENST00000470357 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
VAMP3-202ENST00000470357 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
VAMP3-202ENST00000470357 ANKRD30AQ9BXX3 1397 aa9.82□□□□□ -0.84
VAMP3-202ENST00000470357 KIDINS220Q9ULH0 1771 aa9.81□□□□□ -0.84
VAMP3-202ENST00000470357 PPP1R15BQ5SWA1 713 aa9.81□□□□□ -0.84
VAMP3-202ENST00000470357 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
VAMP3-202ENST00000470357 ESF1Q9H501 851 aaKnown RBP9.81□□□□□ -0.84
VAMP3-202ENST00000470357 PTPRKQ15262 1439 aa9.81□□□□□ -0.84
VAMP3-202ENST00000470357 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
VAMP3-202ENST00000470357 NAIPQ13075 1403 aa9.8□□□□□ -0.84
VAMP3-202ENST00000470357 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
VAMP3-202ENST00000470357 HNRNPMP52272 730 aaKnown RBP eCLIP9.79□□□□□ -0.84
VAMP3-202ENST00000470357 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
VAMP3-202ENST00000470357 MFSD10Q14728 455 aa9.79□□□□□ -0.84
VAMP3-202ENST00000470357 RTEL1-TNFRSF6BF6WH68 1400 aa9.79□□□□□ -0.84
VAMP3-202ENST00000470357 RAB3GAP2Q9H2M9 1393 aa9.78□□□□□ -0.84
VAMP3-202ENST00000470357 MROH2AA6NES4 1674 aa9.78□□□□□ -0.84
VAMP3-202ENST00000470357 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
VAMP3-202ENST00000470357 HSPA1LP34931 641 aa9.78□□□□□ -0.84
VAMP3-202ENST00000470357 CHIC2Q9UKJ5 165 aa9.77□□□□□ -0.85
VAMP3-202ENST00000470357 INO80Q9ULG1 1556 aaPredicted RBP9.76□□□□□ -0.85
VAMP3-202ENST00000470357 SLC34A2O95436 690 aa9.76□□□□□ -0.85
VAMP3-202ENST00000470357 ARSIQ5FYB1 569 aa9.76□□□□□ -0.85
VAMP3-202ENST00000470357 SPAG9O60271 1321 aaKnown RBP9.76□□□□□ -0.85
VAMP3-202ENST00000470357 CLSPNQ9HAW4 1339 aa9.76□□□□□ -0.85
VAMP3-202ENST00000470357 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-202ENST00000470357 ZNF142P52746 1687 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-202ENST00000470357 ZEB1P37275 1124 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-202ENST00000470357 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
VAMP3-202ENST00000470357 CCER1Q8TC90 406 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-202ENST00000470357 KHSRPQ92945 711 aaKnown RBP eCLIP9.75□□□□□ -0.858e-7■□□□□ 9
VAMP3-202ENST00000470357 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
VAMP3-202ENST00000470357 RRP7BPQ9NSQ0 103 aa9.75□□□□□ -0.85
VAMP3-202ENST00000470357 ATP7AQ04656 1500 aa9.75□□□□□ -0.85
VAMP3-202ENST00000470357 DUOX2Q9NRD8 1548 aa9.75□□□□□ -0.85
VAMP3-202ENST00000470357 CEP170BQ9Y4F5 1589 aaPredicted RBP9.75□□□□□ -0.85
VAMP3-202ENST00000470357 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
VAMP3-202ENST00000470357 HOXB1P14653 301 aaPredicted RBP9.74□□□□□ -0.85
VAMP3-202ENST00000470357 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
VAMP3-202ENST00000470357 WDR70Q9NW82 654 aa9.74□□□□□ -0.85
VAMP3-202ENST00000470357 MYO3AQ8NEV4 1616 aa9.74□□□□□ -0.85
VAMP3-202ENST00000470357 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
VAMP3-202ENST00000470357 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
VAMP3-202ENST00000470357 PCDHGA4Q9Y5G9 962 aa9.73□□□□□ -0.85
VAMP3-202ENST00000470357 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
VAMP3-202ENST00000470357 EIF2AK4Q9P2K8 1649 aaKnown RBP9.72□□□□□ -0.85
VAMP3-202ENST00000470357 ALKQ9UM73 1620 aa9.72□□□□□ -0.85
VAMP3-202ENST00000470357 CLTCQ00610 1675 aaKnown RBP9.72□□□□□ -0.85
VAMP3-202ENST00000470357 PTCD2Q8WV60 388 aaKnown RBP9.72□□□□□ -0.85
VAMP3-202ENST00000470357 TOM1O60784 492 aa9.71□□□□□ -0.86
VAMP3-202ENST00000470357 PIP4K2BP78356 416 aa9.71□□□□□ -0.86
VAMP3-202ENST00000470357 A2ML1A8K2U0 1454 aa9.71□□□□□ -0.86
VAMP3-202ENST00000470357 A2MP01023 1474 aa9.71□□□□□ -0.86
VAMP3-202ENST00000470357 POTEMA6NI47 508 aa9.7□□□□□ -0.86
VAMP3-202ENST00000470357 GGT6Q6P531 493 aa9.7□□□□□ -0.86
VAMP3-202ENST00000470357 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
VAMP3-202ENST00000470357 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
VAMP3-202ENST00000470357 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
VAMP3-202ENST00000470357 DHX57Q6P158 1386 aaKnown RBP9.7□□□□□ -0.86
VAMP3-202ENST00000470357 NEURL4Q96JN8 1562 aa9.7□□□□□ -0.86
VAMP3-202ENST00000470357 UNC13BO14795 1591 aa9.69□□□□□ -0.86
VAMP3-202ENST00000470357 TBC1D12O60347 775 aa9.69□□□□□ -0.86
VAMP3-202ENST00000470357 NUDT7P0C024 238 aa9.69□□□□□ -0.86
VAMP3-202ENST00000470357 CPS1P31327 1500 aa9.69□□□□□ -0.86
VAMP3-202ENST00000470357 EMP3P54852 163 aa9.69□□□□□ -0.86
VAMP3-202ENST00000470357 KDM5DQ9BY66 1539 aa9.68□□□□□ -0.86
VAMP3-202ENST00000470357 CAMK2BQ13554 666 aa9.68□□□□□ -0.86
VAMP3-202ENST00000470357 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
VAMP3-202ENST00000470357 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
VAMP3-202ENST00000470357 TRIM52Q96A61 297 aa9.67□□□□□ -0.86
VAMP3-202ENST00000470357 RGS17Q9UGC6 210 aaPredicted RBP9.67□□□□□ -0.86
VAMP3-202ENST00000470357 DEPDC5O75140 1603 aa9.67□□□□□ -0.86
VAMP3-202ENST00000470357 DHX29Q7Z478 1369 aaKnown RBP9.66□□□□□ -0.86
VAMP3-202ENST00000470357 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
VAMP3-202ENST00000470357 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
VAMP3-202ENST00000470357 E2F4Q16254 413 aa9.66□□□□□ -0.86
VAMP3-202ENST00000470357 IQGAP3Q86VI3 1631 aa9.65□□□□□ -0.86
VAMP3-202ENST00000470357 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
VAMP3-202ENST00000470357 MED14O60244 1454 aa9.65□□□□□ -0.87
VAMP3-202ENST00000470357 TNRQ92752 1358 aa9.64□□□□□ -0.87
VAMP3-202ENST00000470357 RNF17Q9BXT8 1623 aaKnown RBP9.64□□□□□ -0.87
VAMP3-202ENST00000470357 ERBB3P21860 1342 aa9.64□□□□□ -0.87
VAMP3-202ENST00000470357 NUP155O75694 1391 aa9.63□□□□□ -0.87
VAMP3-202ENST00000470357 KANK1Q14678 1352 aa9.63□□□□□ -0.87
VAMP3-202ENST00000470357 POLR1AO95602 1720 aaPredicted RBP9.63□□□□□ -0.87
VAMP3-202ENST00000470357 POTEB3A0JP26 581 aa9.63□□□□□ -0.87
VAMP3-202ENST00000470357 POTEBQ6S5H4 581 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms