RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 PRAG1Q86YV5 1406 aa28.43■■■□□ 2.14
LINC00888-201ENST00000468380 MYOM2P54296 1465 aa28.42■■■□□ 2.14
LINC00888-201ENST00000468380 ESCO1Q5FWF5 840 aa28.42■■■□□ 2.14
LINC00888-201ENST00000468380 XPCQ01831 940 aaPredicted RBP28.4■■■□□ 2.14
LINC00888-201ENST00000468380 HFM1A2PYH4 1435 aa28.4■■■□□ 2.14
LINC00888-201ENST00000468380 FOXO3O43524 673 aa28.39■■■□□ 2.14
LINC00888-201ENST00000468380 RPGRIP1LQ68CZ1 1315 aa28.39■■■□□ 2.13
LINC00888-201ENST00000468380 NPHP3Q7Z494 1330 aa28.39■■■□□ 2.13
LINC00888-201ENST00000468380 CCDC125Q86Z20 511 aa28.37■■■□□ 2.13
LINC00888-201ENST00000468380 GJD4Q96KN9 370 aaPredicted RBP28.37■■■□□ 2.13
LINC00888-201ENST00000468380 PXDNQ92626 1479 aa28.37■■■□□ 2.13
LINC00888-201ENST00000468380 NAIPQ13075 1403 aa28.35■■■□□ 2.13
LINC00888-201ENST00000468380 FOXD1Q16676 465 aa28.33■■■□□ 2.13
LINC00888-201ENST00000468380 NUTM2FA1L443 756 aa28.32■■■□□ 2.12
LINC00888-201ENST00000468380 WAPLQ7Z5K2 1190 aa28.31■■■□□ 2.12
LINC00888-201ENST00000468380 CDC42BPGQ6DT37 1551 aa28.28■■■□□ 2.12
LINC00888-201ENST00000468380 ADGRF5Q8IZF2 1346 aa28.28■■■□□ 2.12
LINC00888-201ENST00000468380 STK26Q9P289 416 aa28.28■■■□□ 2.12
LINC00888-201ENST00000468380 PPLO60437 1756 aa28.28■■■□□ 2.12
LINC00888-201ENST00000468380 MARF1Q9Y4F3 1742 aaKnown RBP28.28■■■□□ 2.12
LINC00888-201ENST00000468380 UNC5CLQ8IV45 518 aa28.27■■■□□ 2.12
LINC00888-201ENST00000468380 SLC4A1APQ9BWU0 796 aaKnown RBP28.26■■■□□ 2.11
LINC00888-201ENST00000468380 LRPPRCP42704 1394 aaKnown RBP28.24■■■□□ 2.11
LINC00888-201ENST00000468380 SLIT2O94813 1529 aa28.23■■■□□ 2.11
LINC00888-201ENST00000468380 SPATA31A3Q5VYP0 1347 aa28.23■■■□□ 2.11
LINC00888-201ENST00000468380 RALGAPBQ86X10 1494 aa28.23■■■□□ 2.11
LINC00888-201ENST00000468380 PLEKHH1Q9ULM0 1364 aa28.23■■■□□ 2.11
LINC00888-201ENST00000468380 GLI3P10071 1580 aa28.22■■■□□ 2.11
LINC00888-201ENST00000468380 DEFB132Q7Z7B7 95 aa28.22■■■□□ 2.11
LINC00888-201ENST00000468380 RRBP1Q9P2E9 1410 aaKnown RBP28.22■■■□□ 2.11
LINC00888-201ENST00000468380 TMEM132EQ6IEE7 984 aa28.21■■■□□ 2.11
LINC00888-201ENST00000468380 TECPR2O15040 1411 aa28.19■■■□□ 2.1
LINC00888-201ENST00000468380 BLMP54132 1417 aaPredicted RBP28.19■■■□□ 2.1
LINC00888-201ENST00000468380 RGL3Q3MIN7 710 aa28.19■■■□□ 2.1
LINC00888-201ENST00000468380 KRT28Q7Z3Y7 464 aa28.18■■■□□ 2.1
LINC00888-201ENST00000468380 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.18■■■□□ 2.1
LINC00888-201ENST00000468380 ABCC11Q96J66 1382 aa28.17■■■□□ 2.1
LINC00888-201ENST00000468380 SEPT12Q8IYM1 358 aa28.16■■■□□ 2.1
LINC00888-201ENST00000468380 BRWD3Q6RI45 1802 aa28.14■■■□□ 2.1
LINC00888-201ENST00000468380 CABLES1Q8TDN4 633 aa28.14■■■□□ 2.1
LINC00888-201ENST00000468380 SPATA31E1Q6ZUB1 1445 aa28.11■■■□□ 2.09
LINC00888-201ENST00000468380 ONECUT3O60422 494 aaPredicted RBP28.11■■■□□ 2.09
LINC00888-201ENST00000468380 VPS72Q15906 364 aa28.11■■■□□ 2.09
LINC00888-201ENST00000468380 CCDC144AA2RUR9 1427 aa28.1■■■□□ 2.09
LINC00888-201ENST00000468380 FMN2Q9NZ56 1722 aa28.09■■■□□ 2.09
LINC00888-201ENST00000468380 PLEKHG5O94827 1062 aa28.09■■■□□ 2.09
LINC00888-201ENST00000468380 USP32Q8NFA0 1604 aa28.09■■■□□ 2.09
LINC00888-201ENST00000468380 ANKRD30BQ9BXX2 1392 aa28.08■■■□□ 2.09
LINC00888-201ENST00000468380 PHF8Q9UPP1 1060 aa28.07■■■□□ 2.08
LINC00888-201ENST00000468380 SF3B2Q13435 895 aaKnown RBP28.06■■■□□ 2.08
LINC00888-201ENST00000468380 YTHDC2Q9H6S0 1430 aaKnown RBP28.06■■■□□ 2.08
LINC00888-201ENST00000468380 HAP1P54257 671 aaPredicted RBP28.05■■■□□ 2.08
LINC00888-201ENST00000468380 SIRT1Q96EB6 747 aa28.05■■■□□ 2.08
LINC00888-201ENST00000468380 KNDC1Q76NI1 1749 aa28.04■■■□□ 2.08
LINC00888-201ENST00000468380 KIF1AQ12756 1690 aa28.04■■■□□ 2.08
LINC00888-201ENST00000468380 PIK3C2GO75747 1445 aa28.04■■■□□ 2.08
LINC00888-201ENST00000468380 TNS3Q68CZ2 1445 aa28.04■■■□□ 2.08
LINC00888-201ENST00000468380 PSME1Q06323 249 aa28.04■■■□□ 2.08
LINC00888-201ENST00000468380 KRT27Q7Z3Y8 459 aa28.04■■■□□ 2.08
LINC00888-201ENST00000468380 FAM83GA6ND36 823 aa28.03■■■□□ 2.08
LINC00888-201ENST00000468380 CCDC9Q9Y3X0 531 aaKnown RBP28.03■■■□□ 2.08
LINC00888-201ENST00000468380 RGPD8O14715 1765 aaPredicted RBP28.03■■■□□ 2.08
LINC00888-201ENST00000468380 IFT172Q9UG01 1749 aa28.02■■■□□ 2.08
LINC00888-201ENST00000468380 LMOD2Q6P5Q4 547 aa28■■■□□ 2.07
LINC00888-201ENST00000468380 C14orf93Q9H972 538 aaKnown RBP28■■■□□ 2.07
LINC00888-201ENST00000468380 SBNO1A3KN83 1393 aa27.99■■■□□ 2.07
LINC00888-201ENST00000468380 MPHOSPH9Q99550 1183 aa27.99■■■□□ 2.07
LINC00888-201ENST00000468380 PSDA5PKW4 1024 aaPredicted RBP27.98■■■□□ 2.07
LINC00888-201ENST00000468380 PLCH1Q4KWH8 1693 aa27.97■■■□□ 2.07
LINC00888-201ENST00000468380 NRXN1Q9ULB1 1477 aa27.96■■■□□ 2.07
LINC00888-201ENST00000468380 SAFB2Q14151 953 aaKnown RBP eCLIP27.96■■■□□ 2.07
LINC00888-201ENST00000468380 CFAP70Q5T0N1 1121 aa27.96■■■□□ 2.07
LINC00888-201ENST00000468380 NWD2Q9ULI1 1742 aa27.95■■■□□ 2.07
LINC00888-201ENST00000468380 PMFBP1Q8TBY8 1022 aa27.95■■■□□ 2.06
LINC00888-201ENST00000468380 HRCP23327 699 aa27.94■■■□□ 2.06
LINC00888-201ENST00000468380 PRAM1Q96QH2 718 aa27.94■■■□□ 2.06
LINC00888-201ENST00000468380 LRP5O75197 1615 aa27.93■■■□□ 2.06
LINC00888-201ENST00000468380 FAM98CQ17RN3 349 aaKnown RBP27.93■■■□□ 2.06
LINC00888-201ENST00000468380 ARHGEF10O15013 1369 aa27.93■■■□□ 2.06
LINC00888-201ENST00000468380 BAG6P46379 1132 aa27.92■■■□□ 2.06
LINC00888-201ENST00000468380 ABCA3Q99758 1704 aa27.92■■■□□ 2.06
LINC00888-201ENST00000468380 A0A0G2JS52 829 aa27.91■■■□□ 2.06
LINC00888-201ENST00000468380 MYT1Q01538 1121 aa27.91■■■□□ 2.06
LINC00888-201ENST00000468380 DHX57Q6P158 1386 aaKnown RBP27.9■■■□□ 2.06
LINC00888-201ENST00000468380 BTG4Q9NY30 223 aa27.9■■■□□ 2.06
LINC00888-201ENST00000468380 EN1Q05925 392 aaPredicted RBP27.89■■■□□ 2.06
LINC00888-201ENST00000468380 FAM182BQ5T319 152 aa27.89■■■□□ 2.06
LINC00888-201ENST00000468380 NRAPQ86VF7 1730 aa27.85■■■□□ 2.05
LINC00888-201ENST00000468380 POGKQ9P215 609 aa27.84■■■□□ 2.05
LINC00888-201ENST00000468380 ANKARQ7Z5J8 1434 aa27.82■■■□□ 2.04
LINC00888-201ENST00000468380 HIRIP3Q9BW71 556 aaPredicted RBP27.81■■■□□ 2.04
LINC00888-201ENST00000468380 SPATA31A5Q5VU36 1347 aa27.81■■■□□ 2.04
LINC00888-201ENST00000468380 SPATA31A7Q8IWB4 1347 aa27.81■■■□□ 2.04
LINC00888-201ENST00000468380 R3HDM1Q15032 1099 aaKnown RBP27.8■■■□□ 2.04
LINC00888-201ENST00000468380 PRR36Q9H6K5 1346 aa27.8■■■□□ 2.04
LINC00888-201ENST00000468380 TRPM3Q9HCF6 1732 aaPredicted RBP27.8■■■□□ 2.04
LINC00888-201ENST00000468380 ACIN1Q9UKV3 1341 aaKnown RBP27.77■■■□□ 2.04
LINC00888-201ENST00000468380 DLC1Q96QB1 1528 aa27.77■■■□□ 2.04
LINC00888-201ENST00000468380 ALS2Q96Q42 1657 aa27.76■■■□□ 2.03
LINC00888-201ENST00000468380 TRAK1Q9UPV9 953 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms