RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-208ENST00000468300 THEMISQ8N1K5 641 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-208ENST00000468300 PRAM1Q96QH2 718 aa11.4□□□□□ -0.58
BRCA1-208ENST00000468300 PANK3Q9H999 370 aa11.4□□□□□ -0.58
BRCA1-208ENST00000468300 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
BRCA1-208ENST00000468300 HOMEZQ8IX15 550 aa11.39□□□□□ -0.59
BRCA1-208ENST00000468300 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
BRCA1-208ENST00000468300 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
BRCA1-208ENST00000468300 AEBP2Q6ZN18 517 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-208ENST00000468300 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
BRCA1-208ENST00000468300 WAPLQ7Z5K2 1190 aa11.38□□□□□ -0.59
BRCA1-208ENST00000468300 KCNA4P22459 653 aa11.38□□□□□ -0.59
BRCA1-208ENST00000468300 CHD2O14647 1828 aaKnown RBP11.37□□□□□ -0.59
BRCA1-208ENST00000468300 PARD3Q8TEW0 1356 aa11.37□□□□□ -0.59
BRCA1-208ENST00000468300 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
BRCA1-208ENST00000468300 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
BRCA1-208ENST00000468300 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
BRCA1-208ENST00000468300 CARD14Q9BXL6 1004 aa11.37□□□□□ -0.59
BRCA1-208ENST00000468300 CD163L1Q9NR16 1453 aa11.37□□□□□ -0.59
BRCA1-208ENST00000468300 SAFB2Q14151 953 aaKnown RBP eCLIP11.36□□□□□ -0.591e-6■□□□□ 10.7
BRCA1-208ENST00000468300 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
BRCA1-208ENST00000468300 SLC26A8Q96RN1 970 aa11.36□□□□□ -0.59
BRCA1-208ENST00000468300 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
BRCA1-208ENST00000468300 EID1Q9Y6B2 187 aa11.36□□□□□ -0.59
BRCA1-208ENST00000468300 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
BRCA1-208ENST00000468300 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
BRCA1-208ENST00000468300 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
BRCA1-208ENST00000468300 MINK1Q8N4C8 1332 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-208ENST00000468300 PTCH1Q13635 1447 aa11.34□□□□□ -0.59
BRCA1-208ENST00000468300 SLC12A5Q9H2X9 1139 aa11.33□□□□□ -0.6
BRCA1-208ENST00000468300 TOPAZ1Q8N9V7 1692 aa11.33□□□□□ -0.6
BRCA1-208ENST00000468300 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
BRCA1-208ENST00000468300 NPC1L1Q9UHC9 1359 aa11.32□□□□□ -0.6
BRCA1-208ENST00000468300 YTHDC1Q96MU7 727 aaKnown RBP11.32□□□□□ -0.6
BRCA1-208ENST00000468300 POGKQ9P215 609 aa11.32□□□□□ -0.6
BRCA1-208ENST00000468300 CDK19Q9BWU1 502 aa11.31□□□□□ -0.6
BRCA1-208ENST00000468300 ANKLE2Q86XL3 938 aa11.31□□□□□ -0.6
BRCA1-208ENST00000468300 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
BRCA1-208ENST00000468300 AMOTL2Q9Y2J4 779 aa11.31□□□□□ -0.6
BRCA1-208ENST00000468300 NPHP4O75161 1426 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-208ENST00000468300 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 LMTK3Q96Q04 1460 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 ANKRD36BQ8N2N9 1353 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 BCANQ96GW7 911 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 STRCQ7RTU9 1775 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 STRCP1A6NGW2 1772 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 AKAP12Q02952 1782 aa11.3□□□□□ -0.6
BRCA1-208ENST00000468300 RALBP1Q15311 655 aa11.29□□□□□ -0.6
BRCA1-208ENST00000468300 ATP7BP35670 1465 aa11.29□□□□□ -0.6
BRCA1-208ENST00000468300 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
BRCA1-208ENST00000468300 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
BRCA1-208ENST00000468300 RGPD8O14715 1765 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-208ENST00000468300 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-208ENST00000468300 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-208ENST00000468300 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
BRCA1-208ENST00000468300 NINLQ9Y2I6 1382 aa11.28□□□□□ -0.6
BRCA1-208ENST00000468300 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
BRCA1-208ENST00000468300 NSD3Q9BZ95 1437 aa11.28□□□□□ -0.6
BRCA1-208ENST00000468300 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
BRCA1-208ENST00000468300 MON2Q7Z3U7 1717 aa11.28□□□□□ -0.6
BRCA1-208ENST00000468300 TAOK2Q9UL54 1235 aa11.28□□□□□ -0.6
BRCA1-208ENST00000468300 ANKRD26Q9UPS8 1709 aa11.28□□□□□ -0.6
BRCA1-208ENST00000468300 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
BRCA1-208ENST00000468300 KCNA6P17658 529 aa11.27□□□□□ -0.6
BRCA1-208ENST00000468300 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.61
BRCA1-208ENST00000468300 SRPK2P78362 688 aaKnown RBP11.27□□□□□ -0.61
BRCA1-208ENST00000468300 FMN2Q9NZ56 1722 aa11.27□□□□□ -0.61
BRCA1-208ENST00000468300 CDC42BPGQ6DT37 1551 aa11.26□□□□□ -0.61
BRCA1-208ENST00000468300 NRKQ7Z2Y5 1582 aa11.26□□□□□ -0.61
BRCA1-208ENST00000468300 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
BRCA1-208ENST00000468300 KIF20BQ96Q89 1820 aa11.26□□□□□ -0.61
BRCA1-208ENST00000468300 BRD4O60885 1362 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-208ENST00000468300 TMC1Q8TDI8 760 aa11.26□□□□□ -0.61
BRCA1-208ENST00000468300 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
BRCA1-208ENST00000468300 MRS2Q9HD23 443 aa11.25□□□□□ -0.61
BRCA1-208ENST00000468300 ITSN1Q15811 1721 aa11.25□□□□□ -0.61
BRCA1-208ENST00000468300 PNISRQ8TF01 805 aaKnown RBP11.25□□□□□ -0.61
BRCA1-208ENST00000468300 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
BRCA1-208ENST00000468300 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
BRCA1-208ENST00000468300 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
BRCA1-208ENST00000468300 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
BRCA1-208ENST00000468300 NLRP13Q86W25 1043 aa11.22□□□□□ -0.61
BRCA1-208ENST00000468300 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
BRCA1-208ENST00000468300 SHPRHQ149N8 1683 aa11.22□□□□□ -0.61
BRCA1-208ENST00000468300 HSPA2P54652 639 aa11.22□□□□□ -0.61
BRCA1-208ENST00000468300 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.61
BRCA1-208ENST00000468300 SSH2Q76I76 1423 aa11.2□□□□□ -0.62
BRCA1-208ENST00000468300 FYB1O15117 783 aa11.2□□□□□ -0.62
BRCA1-208ENST00000468300 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
BRCA1-208ENST00000468300 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
BRCA1-208ENST00000468300 NSD2O96028 1365 aa11.19□□□□□ -0.62
BRCA1-208ENST00000468300 MARF1Q9Y4F3 1742 aaKnown RBP11.19□□□□□ -0.62
BRCA1-208ENST00000468300 RBM33Q96EV2 1170 aaKnown RBP11.19□□□□□ -0.62
BRCA1-208ENST00000468300 CGNL1Q0VF96 1302 aa11.19□□□□□ -0.62
BRCA1-208ENST00000468300 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
BRCA1-208ENST00000468300 ADGRL3Q9HAR2 1447 aa11.18□□□□□ -0.62
BRCA1-208ENST00000468300 TERF2IPQ9NYB0 399 aa11.18□□□□□ -0.62
BRCA1-208ENST00000468300 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
BRCA1-208ENST00000468300 ANKARQ7Z5J8 1434 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms