RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 EIF3AQ14152 1382 aaKnown RBP20.15■□□□□ 0.82
ABCF3-206ENST00000466742 TMEM131LA2VDJ0 1609 aa20.15■□□□□ 0.82
ABCF3-206ENST00000466742 AAMPQ13685 434 aa20.14■□□□□ 0.81
ABCF3-206ENST00000466742 SETBP1Q9Y6X0 1596 aa20.13■□□□□ 0.81
ABCF3-206ENST00000466742 CENPJQ9HC77 1338 aaPredicted RBP20.13■□□□□ 0.81
ABCF3-206ENST00000466742 POLR3GLQ9BT43 218 aa20.13■□□□□ 0.81
ABCF3-206ENST00000466742 SLC4A3P48751 1232 aa20.12■□□□□ 0.81
ABCF3-206ENST00000466742 TMF1P82094 1093 aa20.12■□□□□ 0.81
ABCF3-206ENST00000466742 EXOC6Q8TAG9 804 aa20.11■□□□□ 0.81
ABCF3-206ENST00000466742 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
ABCF3-206ENST00000466742 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
ABCF3-206ENST00000466742 FGD1P98174 961 aa20.1■□□□□ 0.81
ABCF3-206ENST00000466742 ADGRB1O14514 1584 aa20.08■□□□□ 0.8
ABCF3-206ENST00000466742 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
ABCF3-206ENST00000466742 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
ABCF3-206ENST00000466742 A2ML1A8K2U0 1454 aa20.06■□□□□ 0.8
ABCF3-206ENST00000466742 PRDM4Q9UKN5 801 aa20.05■□□□□ 0.8
ABCF3-206ENST00000466742 CDCA8Q53HL2 280 aa20.04■□□□□ 0.8
ABCF3-206ENST00000466742 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
ABCF3-206ENST00000466742 TNRQ92752 1358 aa20.04■□□□□ 0.8
ABCF3-206ENST00000466742 SBNO2Q9Y2G9 1366 aa20.04■□□□□ 0.8
ABCF3-206ENST00000466742 A0A0U1RQG5 324 aaPredicted RBP20.03■□□□□ 0.8
ABCF3-206ENST00000466742 PDCL3Q9H2J4 239 aa20.03■□□□□ 0.8
ABCF3-206ENST00000466742 POGKQ9P215 609 aa20.02■□□□□ 0.79
ABCF3-206ENST00000466742 MYO5BQ9ULV0 1848 aa20.01■□□□□ 0.79
ABCF3-206ENST00000466742 MYO3AQ8NEV4 1616 aa20.01■□□□□ 0.79
ABCF3-206ENST00000466742 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
ABCF3-206ENST00000466742 RIMS2Q9UQ26 1411 aa19.98■□□□□ 0.79
ABCF3-206ENST00000466742 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
ABCF3-206ENST00000466742 KTN1Q86UP2 1357 aaKnown RBP19.96■□□□□ 0.79
ABCF3-206ENST00000466742 PER1O15534 1290 aaPredicted RBP19.96■□□□□ 0.79
ABCF3-206ENST00000466742 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
ABCF3-206ENST00000466742 NLRP1Q9C000 1473 aa19.95■□□□□ 0.78
ABCF3-206ENST00000466742 TPM2P07951 284 aa19.94■□□□□ 0.78
ABCF3-206ENST00000466742 KDM5AP29375 1690 aaKnown RBP19.94■□□□□ 0.78
ABCF3-206ENST00000466742 ASXL1Q8IXJ9 1541 aa19.94■□□□□ 0.78
ABCF3-206ENST00000466742 RCAN3Q9UKA8 241 aa19.94■□□□□ 0.78
ABCF3-206ENST00000466742 PDE4CQ08493 712 aa19.93■□□□□ 0.78
ABCF3-206ENST00000466742 PANK3Q9H999 370 aa19.93■□□□□ 0.78
ABCF3-206ENST00000466742 XRCC6P12956 609 aaKnown RBP eCLIP19.93■□□□□ 0.78
ABCF3-206ENST00000466742 HDGFP51858 240 aaKnown RBP19.93■□□□□ 0.78
ABCF3-206ENST00000466742 ALKQ9UM73 1620 aa19.92■□□□□ 0.78
ABCF3-206ENST00000466742 FSD2A1L4K1 749 aa19.91■□□□□ 0.78
ABCF3-206ENST00000466742 CEBPAP49715 358 aaPredicted RBP19.91■□□□□ 0.78
ABCF3-206ENST00000466742 RALBP1Q15311 655 aa19.91■□□□□ 0.78
ABCF3-206ENST00000466742 PNISRQ8TF01 805 aaKnown RBP19.91■□□□□ 0.78
ABCF3-206ENST00000466742 FAM161AQ3B820 660 aa19.91■□□□□ 0.78
ABCF3-206ENST00000466742 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
ABCF3-206ENST00000466742 FER1L4A9Z1Z3 1794 aa19.9■□□□□ 0.78
ABCF3-206ENST00000466742 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
ABCF3-206ENST00000466742 C3P01024 1663 aa19.89■□□□□ 0.77
ABCF3-206ENST00000466742 C8orf34Q49A92 452 aa19.88■□□□□ 0.77
ABCF3-206ENST00000466742 PUS7Q96PZ0 661 aaKnown RBP19.87■□□□□ 0.77
ABCF3-206ENST00000466742 UBR1Q8IWV7 1749 aa19.87■□□□□ 0.77
ABCF3-206ENST00000466742 ARHGEF28Q8N1W1 1705 aaKnown RBP19.87■□□□□ 0.77
ABCF3-206ENST00000466742 GOLGA6L3A6NEY3 463 aa19.87■□□□□ 0.77
ABCF3-206ENST00000466742 PARD3Q8TEW0 1356 aa19.87■□□□□ 0.77
ABCF3-206ENST00000466742 QRICH2Q9H0J4 1663 aa19.86■□□□□ 0.77
ABCF3-206ENST00000466742 PTPRMP28827 1452 aa19.86■□□□□ 0.77
ABCF3-206ENST00000466742 SKAP1Q86WV1 359 aa19.86■□□□□ 0.77
ABCF3-206ENST00000466742 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
ABCF3-206ENST00000466742 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
ABCF3-206ENST00000466742 RGS3P49796 1198 aa19.84■□□□□ 0.77
ABCF3-206ENST00000466742 STK26Q9P289 416 aa19.84■□□□□ 0.77
ABCF3-206ENST00000466742 MYOM1P52179 1685 aa19.83■□□□□ 0.77
ABCF3-206ENST00000466742 KDM2BQ8NHM5 1336 aa19.83■□□□□ 0.77
ABCF3-206ENST00000466742 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.76
ABCF3-206ENST00000466742 EVC2Q86UK5 1308 aa19.83■□□□□ 0.76
ABCF3-206ENST00000466742 CNGB1Q14028 1251 aaPredicted RBP19.82■□□□□ 0.76
ABCF3-206ENST00000466742 KNSTRNQ9Y448 316 aa19.82■□□□□ 0.76
ABCF3-206ENST00000466742 NRXN3Q9Y4C0 1643 aa19.82■□□□□ 0.76
ABCF3-206ENST00000466742 ESPNB1AK53 854 aa19.81■□□□□ 0.76
ABCF3-206ENST00000466742 PDE3BQ13370 1112 aa19.81■□□□□ 0.76
ABCF3-206ENST00000466742 ABCC11Q96J66 1382 aa19.81■□□□□ 0.76
ABCF3-206ENST00000466742 DLC1Q96QB1 1528 aa19.81■□□□□ 0.76
ABCF3-206ENST00000466742 SETD1AO15047 1707 aaKnown RBP19.81■□□□□ 0.76
ABCF3-206ENST00000466742 PRAM1Q96QH2 718 aa19.8■□□□□ 0.76
ABCF3-206ENST00000466742 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-206ENST00000466742 NPC1L1Q9UHC9 1359 aa19.8■□□□□ 0.76
ABCF3-206ENST00000466742 PANK2Q9BZ23 570 aa19.8■□□□□ 0.76
ABCF3-206ENST00000466742 SLIT1O75093 1534 aa19.79■□□□□ 0.76
ABCF3-206ENST00000466742 TULP4Q9NRJ4 1543 aa19.79■□□□□ 0.76
ABCF3-206ENST00000466742 AMER1Q5JTC6 1135 aaPredicted RBP19.79■□□□□ 0.76
ABCF3-206ENST00000466742 ARHGAP23Q9P227 1491 aa19.79■□□□□ 0.76
ABCF3-206ENST00000466742 PLEKHG1Q9ULL1 1385 aa19.79■□□□□ 0.76
ABCF3-206ENST00000466742 NLRP13Q86W25 1043 aa19.78■□□□□ 0.76
ABCF3-206ENST00000466742 CC2D1BQ5T0F9 858 aaKnown RBP19.77■□□□□ 0.76
ABCF3-206ENST00000466742 METP08581 1390 aa19.77■□□□□ 0.76
ABCF3-206ENST00000466742 LTKP29376 864 aa19.77■□□□□ 0.76
ABCF3-206ENST00000466742 THEMISQ8N1K5 641 aaPredicted RBP19.77■□□□□ 0.76
ABCF3-206ENST00000466742 ADAMTSL3P82987 1691 aa19.77■□□□□ 0.75
ABCF3-206ENST00000466742 CENPQQ7L2Z9 268 aaPredicted RBP19.76■□□□□ 0.75
ABCF3-206ENST00000466742 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
ABCF3-206ENST00000466742 MRE11P49959 708 aa19.76■□□□□ 0.75
ABCF3-206ENST00000466742 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
ABCF3-206ENST00000466742 TXNDC2Q86VQ3 553 aa19.76■□□□□ 0.75
ABCF3-206ENST00000466742 CRBNQ96SW2 442 aa19.76■□□□□ 0.75
ABCF3-206ENST00000466742 EID1Q9Y6B2 187 aa19.76■□□□□ 0.75
ABCF3-206ENST00000466742 ADAMTS13Q76LX8 1427 aa19.75■□□□□ 0.75
ABCF3-206ENST00000466742 SAFB2Q14151 953 aaKnown RBP eCLIP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms