RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 UNC13BO14795 1591 aa8.65□□□□□ -1.03
PRKCB-204ENST00000466124 LAMC1P11047 1609 aa8.64□□□□□ -1.03
PRKCB-204ENST00000466124 NRXN3Q9Y4C0 1643 aa8.63□□□□□ -1.03
PRKCB-204ENST00000466124 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
PRKCB-204ENST00000466124 ATRNO75882 1429 aa8.63□□□□□ -1.03
PRKCB-204ENST00000466124 PTCH1Q13635 1447 aa8.63□□□□□ -1.03
PRKCB-204ENST00000466124 ADGRL3Q9HAR2 1447 aa8.63□□□□□ -1.03
PRKCB-204ENST00000466124 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
PRKCB-204ENST00000466124 CCDC125Q86Z20 511 aa8.62□□□□□ -1.03
PRKCB-204ENST00000466124 PROM2Q8N271 834 aa8.62□□□□□ -1.03
PRKCB-204ENST00000466124 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
PRKCB-204ENST00000466124 TRPC5Q9UL62 973 aaPredicted RBP8.62□□□□□ -1.03
PRKCB-204ENST00000466124 ADAMTS2O95450 1211 aa8.61□□□□□ -1.03
PRKCB-204ENST00000466124 CHGAP10645 457 aaKnown RBP8.61□□□□□ -1.03
PRKCB-204ENST00000466124 DDX17Q92841 729 aaKnown RBP8.61□□□□□ -1.03
PRKCB-204ENST00000466124 USP21Q9UK80 565 aa8.61□□□□□ -1.03
PRKCB-204ENST00000466124 E9PCH4 1651 aa8.61□□□□□ -1.03
PRKCB-204ENST00000466124 NALCNQ8IZF0 1738 aa8.6□□□□□ -1.03
PRKCB-204ENST00000466124 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
PRKCB-204ENST00000466124 C1orf167Q5SNV9 1468 aa8.6□□□□□ -1.03
PRKCB-204ENST00000466124 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
PRKCB-204ENST00000466124 LRP5O75197 1615 aa8.59□□□□□ -1.03
PRKCB-204ENST00000466124 IQGAP3Q86VI3 1631 aa8.59□□□□□ -1.03
PRKCB-204ENST00000466124 COL22A1Q8NFW1 1626 aaPredicted RBP8.59□□□□□ -1.03
PRKCB-204ENST00000466124 METP08581 1390 aa8.59□□□□□ -1.03
PRKCB-204ENST00000466124 MYOM2P54296 1465 aa8.58□□□□□ -1.04
PRKCB-204ENST00000466124 SPDYE2BA6NHP3 402 aa8.58□□□□□ -1.04
PRKCB-204ENST00000466124 SPDYE6P0CI01 402 aa8.58□□□□□ -1.04
PRKCB-204ENST00000466124 SPDYE2Q495Y8 402 aa8.58□□□□□ -1.04
PRKCB-204ENST00000466124 BCL9LQ86UU0 1499 aa8.57□□□□□ -1.04
PRKCB-204ENST00000466124 BLMP54132 1417 aaPredicted RBP8.56□□□□□ -1.04
PRKCB-204ENST00000466124 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
PRKCB-204ENST00000466124 PRAG1Q86YV5 1406 aa8.55□□□□□ -1.04
PRKCB-204ENST00000466124 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.55□□□□□ -1.04
PRKCB-204ENST00000466124 SPHKAPQ2M3C7 1700 aa8.54□□□□□ -1.04
PRKCB-204ENST00000466124 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
PRKCB-204ENST00000466124 GJD4Q96KN9 370 aaPredicted RBP8.54□□□□□ -1.04
PRKCB-204ENST00000466124 ORAI2Q96SN7 254 aa8.54□□□□□ -1.04
PRKCB-204ENST00000466124 GLI3P10071 1580 aa8.53□□□□□ -1.04
PRKCB-204ENST00000466124 NEXMIFQ5QGS0 1516 aa8.53□□□□□ -1.04
PRKCB-204ENST00000466124 RALGAPBQ86X10 1494 aa8.52□□□□□ -1.05
PRKCB-204ENST00000466124 PXDNQ92626 1479 aa8.52□□□□□ -1.05
PRKCB-204ENST00000466124 ROCK1Q13464 1354 aa8.52□□□□□ -1.05
PRKCB-204ENST00000466124 ROBO2Q9HCK4 1378 aa8.52□□□□□ -1.05
PRKCB-204ENST00000466124 DEFB132Q7Z7B7 95 aa8.52□□□□□ -1.05
PRKCB-204ENST00000466124 SLIT2O94813 1529 aa8.52□□□□□ -1.05
PRKCB-204ENST00000466124 NPHP3Q7Z494 1330 aa8.51□□□□□ -1.05
PRKCB-204ENST00000466124 NUP155O75694 1391 aa8.5□□□□□ -1.05
PRKCB-204ENST00000466124 BRWD3Q6RI45 1802 aa8.5□□□□□ -1.05
PRKCB-204ENST00000466124 HFM1A2PYH4 1435 aa8.5□□□□□ -1.05
PRKCB-204ENST00000466124 FAM50AQ14320 339 aaKnown RBP8.5□□□□□ -1.05
PRKCB-204ENST00000466124 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
PRKCB-204ENST00000466124 CDC42BPGQ6DT37 1551 aa8.5□□□□□ -1.05
PRKCB-204ENST00000466124 UNC5CLQ8IV45 518 aa8.5□□□□□ -1.05
PRKCB-204ENST00000466124 FBXO3Q9UK99 471 aa8.5□□□□□ -1.05
PRKCB-204ENST00000466124 SF3B2Q13435 895 aaKnown RBP8.49□□□□□ -1.05
PRKCB-204ENST00000466124 LOC105371045A0A1W2PR82 267 aa8.48□□□□□ -1.05
PRKCB-204ENST00000466124 HRCP23327 699 aa8.48□□□□□ -1.05
PRKCB-204ENST00000466124 CLTCL1P53675 1640 aa8.47□□□□□ -1.05
PRKCB-204ENST00000466124 USP32Q8NFA0 1604 aa8.47□□□□□ -1.05
PRKCB-204ENST00000466124 ONECUT3O60422 494 aaPredicted RBP8.47□□□□□ -1.05
PRKCB-204ENST00000466124 ESCO1Q5FWF5 840 aa8.47□□□□□ -1.05
PRKCB-204ENST00000466124 SEPT12Q8IYM1 358 aa8.47□□□□□ -1.05
PRKCB-204ENST00000466124 LRPPRCP42704 1394 aaKnown RBP8.47□□□□□ -1.05
PRKCB-204ENST00000466124 VPS72Q15906 364 aa8.46□□□□□ -1.06
PRKCB-204ENST00000466124 PSDA5PKW4 1024 aaPredicted RBP8.45□□□□□ -1.06
PRKCB-204ENST00000466124 FOXO3O43524 673 aa8.45□□□□□ -1.06
PRKCB-204ENST00000466124 XPCQ01831 940 aaPredicted RBP8.45□□□□□ -1.06
PRKCB-204ENST00000466124 SPATA31A3Q5VYP0 1347 aa8.45□□□□□ -1.06
PRKCB-204ENST00000466124 NWD2Q9ULI1 1742 aa8.45□□□□□ -1.06
PRKCB-204ENST00000466124 KIF1BO60333 1816 aa8.45□□□□□ -1.06
PRKCB-204ENST00000466124 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
PRKCB-204ENST00000466124 BAG6P46379 1132 aa8.44□□□□□ -1.06
PRKCB-204ENST00000466124 VASPP50552 380 aaPredicted RBP8.44□□□□□ -1.06
PRKCB-204ENST00000466124 KRT27Q7Z3Y8 459 aa8.44□□□□□ -1.06
PRKCB-204ENST00000466124 CCDC144AA2RUR9 1427 aa8.44□□□□□ -1.06
PRKCB-204ENST00000466124 NAIPQ13075 1403 aa8.44□□□□□ -1.06
PRKCB-204ENST00000466124 KIF1AQ12756 1690 aa8.43□□□□□ -1.06
PRKCB-204ENST00000466124 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
PRKCB-204ENST00000466124 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
PRKCB-204ENST00000466124 DISP2A7MBM2 1401 aa8.43□□□□□ -1.06
PRKCB-204ENST00000466124 TECPR2O15040 1411 aa8.43□□□□□ -1.06
PRKCB-204ENST00000466124 RBM42Q9BTD8 480 aaKnown RBP8.42□□□□□ -1.06
PRKCB-204ENST00000466124 RPGRIP1LQ68CZ1 1315 aa8.42□□□□□ -1.06
PRKCB-204ENST00000466124 TNS3Q68CZ2 1445 aa8.42□□□□□ -1.06
PRKCB-204ENST00000466124 RGPD1P0DJD0 1748 aa8.42□□□□□ -1.06
PRKCB-204ENST00000466124 PPLO60437 1756 aa8.41□□□□□ -1.06
PRKCB-204ENST00000466124 ABCA3Q99758 1704 aa8.41□□□□□ -1.06
PRKCB-204ENST00000466124 FMN2Q9NZ56 1722 aa8.41□□□□□ -1.06
PRKCB-204ENST00000466124 NRAPQ86VF7 1730 aa8.4□□□□□ -1.06
PRKCB-204ENST00000466124 EN1Q05925 392 aaPredicted RBP8.4□□□□□ -1.06
PRKCB-204ENST00000466124 R3HDM1Q15032 1099 aaKnown RBP8.4□□□□□ -1.06
PRKCB-204ENST00000466124 KNDC1Q76NI1 1749 aa8.4□□□□□ -1.07
PRKCB-204ENST00000466124 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.07
PRKCB-204ENST00000466124 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
PRKCB-204ENST00000466124 YY1P25490 414 aa8.39□□□□□ -1.07
PRKCB-204ENST00000466124 KRT28Q7Z3Y7 464 aa8.39□□□□□ -1.07
PRKCB-204ENST00000466124 SBNO1A3KN83 1393 aa8.38□□□□□ -1.07
PRKCB-204ENST00000466124 ABCC11Q96J66 1382 aa8.38□□□□□ -1.07
PRKCB-204ENST00000466124 THSD7AQ9UPZ6 1657 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms