RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FNBP4Q8N3X1 1017 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-215ENST00000465457 NUP155O75694 1391 aa20.51■□□□□ 0.87
HDAC6-215ENST00000465457 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.51■□□□□ 0.87
HDAC6-215ENST00000465457 GLI3P10071 1580 aa20.51■□□□□ 0.87
HDAC6-215ENST00000465457 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
HDAC6-215ENST00000465457 ZNF326Q5BKZ1 582 aaKnown RBP20.5■□□□□ 0.87
HDAC6-215ENST00000465457 LRP5O75197 1615 aa20.49■□□□□ 0.87
HDAC6-215ENST00000465457 PXDNQ92626 1479 aa20.48■□□□□ 0.87
HDAC6-215ENST00000465457 KIF1BO60333 1816 aa20.48■□□□□ 0.87
HDAC6-215ENST00000465457 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
HDAC6-215ENST00000465457 DEFB132Q7Z7B7 95 aa20.44■□□□□ 0.86
HDAC6-215ENST00000465457 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
HDAC6-215ENST00000465457 BLMP54132 1417 aaPredicted RBP20.43■□□□□ 0.86
HDAC6-215ENST00000465457 RALGAPBQ86X10 1494 aa20.43■□□□□ 0.86
HDAC6-215ENST00000465457 CCER1Q8TC90 406 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-215ENST00000465457 CDC42BPGQ6DT37 1551 aa20.42■□□□□ 0.86
HDAC6-215ENST00000465457 GJD4Q96KN9 370 aaPredicted RBP20.41■□□□□ 0.86
HDAC6-215ENST00000465457 FOXD1Q16676 465 aa20.4■□□□□ 0.86
HDAC6-215ENST00000465457 PRAG1Q86YV5 1406 aa20.4■□□□□ 0.86
HDAC6-215ENST00000465457 CCDC125Q86Z20 511 aa20.4■□□□□ 0.86
HDAC6-215ENST00000465457 PPLO60437 1756 aa20.39■□□□□ 0.85
HDAC6-215ENST00000465457 USP32Q8NFA0 1604 aa20.38■□□□□ 0.85
HDAC6-215ENST00000465457 SLIT2O94813 1529 aa20.37■□□□□ 0.85
HDAC6-215ENST00000465457 PLCH1Q4KWH8 1693 aa20.37■□□□□ 0.85
HDAC6-215ENST00000465457 ITGAEP38570 1179 aa20.35■□□□□ 0.85
HDAC6-215ENST00000465457 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
HDAC6-215ENST00000465457 ABCA3Q99758 1704 aa20.34■□□□□ 0.85
HDAC6-215ENST00000465457 ESCO1Q5FWF5 840 aa20.34■□□□□ 0.85
HDAC6-215ENST00000465457 HFM1A2PYH4 1435 aa20.34■□□□□ 0.85
HDAC6-215ENST00000465457 FOXO3O43524 673 aa20.33■□□□□ 0.85
HDAC6-215ENST00000465457 PSDA5PKW4 1024 aaPredicted RBP20.32■□□□□ 0.84
HDAC6-215ENST00000465457 FMN2Q9NZ56 1722 aa20.31■□□□□ 0.84
HDAC6-215ENST00000465457 NUTM2FA1L443 756 aa20.31■□□□□ 0.84
HDAC6-215ENST00000465457 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
HDAC6-215ENST00000465457 RGPD8O14715 1765 aaPredicted RBP20.31■□□□□ 0.84
HDAC6-215ENST00000465457 NAIPQ13075 1403 aa20.29■□□□□ 0.84
HDAC6-215ENST00000465457 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
HDAC6-215ENST00000465457 NWD2Q9ULI1 1742 aa20.28■□□□□ 0.84
HDAC6-215ENST00000465457 KIF1AQ12756 1690 aa20.27■□□□□ 0.84
HDAC6-215ENST00000465457 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
HDAC6-215ENST00000465457 NRAPQ86VF7 1730 aa20.25■□□□□ 0.83
HDAC6-215ENST00000465457 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
HDAC6-215ENST00000465457 KNDC1Q76NI1 1749 aa20.24■□□□□ 0.83
HDAC6-215ENST00000465457 PLEKHH1Q9ULM0 1364 aa20.24■□□□□ 0.83
HDAC6-215ENST00000465457 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
HDAC6-215ENST00000465457 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
HDAC6-215ENST00000465457 TNS1Q9HBL0 1735 aaKnown RBP20.22■□□□□ 0.83
HDAC6-215ENST00000465457 VGFO15240 615 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-215ENST00000465457 SF3B2Q13435 895 aaKnown RBP20.22■□□□□ 0.83
HDAC6-215ENST00000465457 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
HDAC6-215ENST00000465457 CABLES1Q8TDN4 633 aa20.21■□□□□ 0.83
HDAC6-215ENST00000465457 RGPD1P0DJD0 1748 aa20.21■□□□□ 0.83
HDAC6-215ENST00000465457 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
HDAC6-215ENST00000465457 TECPR2O15040 1411 aa20.19■□□□□ 0.82
HDAC6-215ENST00000465457 VPS72Q15906 364 aa20.19■□□□□ 0.82
HDAC6-215ENST00000465457 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
HDAC6-215ENST00000465457 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
HDAC6-215ENST00000465457 KRT27Q7Z3Y8 459 aa20.18■□□□□ 0.82
HDAC6-215ENST00000465457 STK26Q9P289 416 aa20.17■□□□□ 0.82
HDAC6-215ENST00000465457 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
HDAC6-215ENST00000465457 CCDC9Q9Y3X0 531 aaKnown RBP20.16■□□□□ 0.82
HDAC6-215ENST00000465457 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
HDAC6-215ENST00000465457 DHX57Q6P158 1386 aaKnown RBP20.16■□□□□ 0.82
HDAC6-215ENST00000465457 ONECUT3O60422 494 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-215ENST00000465457 FAM182BQ5T319 152 aa20.15■□□□□ 0.82
HDAC6-215ENST00000465457 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.81
HDAC6-215ENST00000465457 KRT28Q7Z3Y7 464 aa20.14■□□□□ 0.81
HDAC6-215ENST00000465457 RPGRIP1LQ68CZ1 1315 aa20.13■□□□□ 0.81
HDAC6-215ENST00000465457 BAG6P46379 1132 aa20.13■□□□□ 0.81
HDAC6-215ENST00000465457 EN1Q05925 392 aaPredicted RBP20.13■□□□□ 0.81
HDAC6-215ENST00000465457 A0A0G2JS52 829 aa20.12■□□□□ 0.81
HDAC6-215ENST00000465457 MYT1Q01538 1121 aa20.12■□□□□ 0.81
HDAC6-215ENST00000465457 R3HDM1Q15032 1099 aaKnown RBP20.12■□□□□ 0.81
HDAC6-215ENST00000465457 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-215ENST00000465457 THSD7AQ9UPZ6 1657 aa20.11■□□□□ 0.81
HDAC6-215ENST00000465457 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
HDAC6-215ENST00000465457 TMEM132EQ6IEE7 984 aa20.11■□□□□ 0.81
HDAC6-215ENST00000465457 FAM98CQ17RN3 349 aaKnown RBP20.1■□□□□ 0.81
HDAC6-215ENST00000465457 NRXN1Q9ULB1 1477 aa20.1■□□□□ 0.81
HDAC6-215ENST00000465457 CRYBG1Q9Y4K1 1723 aa20.1■□□□□ 0.81
HDAC6-215ENST00000465457 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
HDAC6-215ENST00000465457 COL14A1Q05707 1796 aaKnown RBP20.08■□□□□ 0.8
HDAC6-215ENST00000465457 ABCC11Q96J66 1382 aa20.08■□□□□ 0.8
HDAC6-215ENST00000465457 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
HDAC6-215ENST00000465457 PIK3C2GO75747 1445 aa20.06■□□□□ 0.8
HDAC6-215ENST00000465457 LMOD2Q6P5Q4 547 aa20.06■□□□□ 0.8
HDAC6-215ENST00000465457 YTHDC2Q9H6S0 1430 aaKnown RBP20.06■□□□□ 0.8
HDAC6-215ENST00000465457 PHF8Q9UPP1 1060 aa20.06■□□□□ 0.8
HDAC6-215ENST00000465457 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
HDAC6-215ENST00000465457 DISP2A7MBM2 1401 aa20.05■□□□□ 0.8
HDAC6-215ENST00000465457 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
HDAC6-215ENST00000465457 RREB1Q92766 1687 aa20.05■□□□□ 0.8
HDAC6-215ENST00000465457 SBNO1A3KN83 1393 aa20.05■□□□□ 0.8
HDAC6-215ENST00000465457 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
HDAC6-215ENST00000465457 EZH2Q15910 746 aaKnown RBP20.03■□□□□ 0.8
HDAC6-215ENST00000465457 BTG4Q9NY30 223 aa20.02■□□□□ 0.8
HDAC6-215ENST00000465457 ARHGEF10O15013 1369 aa20.02■□□□□ 0.8
HDAC6-215ENST00000465457 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
HDAC6-215ENST00000465457 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
HDAC6-215ENST00000465457 CAMTA1Q9Y6Y1 1673 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms