RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 MROH1Q8NDA8 1641 aa15.08■□□□□ 0
APP-213ENST00000464867 CCDC125Q86Z20 511 aa15.08■□□□□ 0
APP-213ENST00000464867 C19orf44Q9H6X5 657 aa15.08■□□□□ 0
APP-213ENST00000464867 IDI1Q13907 227 aa15.07■□□□□ 0
APP-213ENST00000464867 HDGFP51858 240 aaKnown RBP15.06■□□□□ 0
APP-213ENST00000464867 TRPC6Q9Y210 931 aa15.06■□□□□ 0
APP-213ENST00000464867 PPP1R15AO75807 674 aaPredicted RBP15.05■□□□□ -0
APP-213ENST00000464867 LRRC59Q96AG4 307 aaKnown RBP15.05■□□□□ -0
APP-213ENST00000464867 FAM212AQ96EL1 285 aa15.05■□□□□ -0
APP-213ENST00000464867 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.04■□□□□ -0
APP-213ENST00000464867 MAST1Q9Y2H9 1570 aa15.04■□□□□ -0
APP-213ENST00000464867 KANK1Q14678 1352 aa15.04■□□□□ -0
APP-213ENST00000464867 ASTLQ6HA08 431 aaPredicted RBP15.04■□□□□ -0
APP-213ENST00000464867 DIP2AQ14689 1571 aa15.03■□□□□ -0
APP-213ENST00000464867 ATMINO43313 823 aaPredicted RBP15.03■□□□□ -0
APP-213ENST00000464867 BRINP3Q76B58 766 aa15.03■□□□□ -0
APP-213ENST00000464867 DUOX2Q9NRD8 1548 aa15.02■□□□□ -0
APP-213ENST00000464867 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
APP-213ENST00000464867 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
APP-213ENST00000464867 TRPC5Q9UL62 973 aaPredicted RBP15□□□□□ -0.01
APP-213ENST00000464867 TBX22Q9Y458 520 aa15□□□□□ -0.01
APP-213ENST00000464867 PLEKHG1Q9ULL1 1385 aa14.99□□□□□ -0.01
APP-213ENST00000464867 ADGRB3O60242 1522 aa14.99□□□□□ -0.01
APP-213ENST00000464867 ADAMTS2O95450 1211 aa14.99□□□□□ -0.01
APP-213ENST00000464867 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
APP-213ENST00000464867 USP21Q9UK80 565 aa14.99□□□□□ -0.01
APP-213ENST00000464867 DCAF8Q5TAQ9 597 aa14.97□□□□□ -0.01
APP-213ENST00000464867 EP400Q96L91 3159 aa14.96□□□□□ -0.01
APP-213ENST00000464867 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
APP-213ENST00000464867 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
APP-213ENST00000464867 PCDHB13Q9Y5F0 798 aa14.96□□□□□ -0.01
APP-213ENST00000464867 ASXL1Q8IXJ9 1541 aa14.96□□□□□ -0.02
APP-213ENST00000464867 ERBINQ96RT1 1412 aa14.95□□□□□ -0.02
APP-213ENST00000464867 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
APP-213ENST00000464867 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.94□□□□□ -0.02
APP-213ENST00000464867 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
APP-213ENST00000464867 LRP5O75197 1615 aa14.93□□□□□ -0.02
APP-213ENST00000464867 NHSL1Q5SYE7 1610 aa14.93□□□□□ -0.02
APP-213ENST00000464867 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
APP-213ENST00000464867 PNPLA6Q8IY17 1366 aa14.93□□□□□ -0.02
APP-213ENST00000464867 PIK3R4Q99570 1358 aa14.93□□□□□ -0.02
APP-213ENST00000464867 DCCP43146 1447 aa14.92□□□□□ -0.02
APP-213ENST00000464867 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
APP-213ENST00000464867 POTEB2H3BUK9 544 aa14.92□□□□□ -0.02
APP-213ENST00000464867 IFNL1Q8IU54 200 aa14.92□□□□□ -0.02
APP-213ENST00000464867 SGIP1Q9BQI5 828 aa14.92□□□□□ -0.02
APP-213ENST00000464867 RRP7BPQ9NSQ0 103 aa14.92□□□□□ -0.02
APP-213ENST00000464867 ZFYVE9O95405 1425 aa14.91□□□□□ -0.02
APP-213ENST00000464867 MYO5BQ9ULV0 1848 aa14.9□□□□□ -0.02
APP-213ENST00000464867 PYGBP11216 843 aa14.9□□□□□ -0.02
APP-213ENST00000464867 AMOTL2Q9Y2J4 779 aa14.9□□□□□ -0.02
APP-213ENST00000464867 NOS1P29475 1434 aa14.9□□□□□ -0.02
APP-213ENST00000464867 LMTK2Q8IWU2 1503 aa14.89□□□□□ -0.03
APP-213ENST00000464867 TIE1P35590 1138 aa14.89□□□□□ -0.03
APP-213ENST00000464867 FNBP4Q8N3X1 1017 aaPredicted RBP14.89□□□□□ -0.03
APP-213ENST00000464867 METRNQ9UJH8 293 aa14.89□□□□□ -0.03
APP-213ENST00000464867 BLMP54132 1417 aaPredicted RBP14.89□□□□□ -0.03
APP-213ENST00000464867 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
APP-213ENST00000464867 ATRNO75882 1429 aa14.87□□□□□ -0.03
APP-213ENST00000464867 TTLL13PA6NNM8 815 aa14.87□□□□□ -0.03
APP-213ENST00000464867 CHGAP10645 457 aaKnown RBP14.87□□□□□ -0.03
APP-213ENST00000464867 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
APP-213ENST00000464867 MST1RQ04912 1400 aa14.86□□□□□ -0.03
APP-213ENST00000464867 PTCH1Q13635 1447 aa14.86□□□□□ -0.03
APP-213ENST00000464867 SLC39A7Q92504 469 aa14.86□□□□□ -0.03
APP-213ENST00000464867 GCC2Q8IWJ2 1684 aa14.86□□□□□ -0.03
APP-213ENST00000464867 TRPM2O94759 1503 aa14.86□□□□□ -0.03
APP-213ENST00000464867 C7P10643 843 aa14.85□□□□□ -0.03
APP-213ENST00000464867 DEFB132Q7Z7B7 95 aa14.85□□□□□ -0.03
APP-213ENST00000464867 ADAMTS13Q76LX8 1427 aa14.84□□□□□ -0.03
APP-213ENST00000464867 YY1P25490 414 aa14.83□□□□□ -0.04
APP-213ENST00000464867 GJD4Q96KN9 370 aaPredicted RBP14.83□□□□□ -0.04
APP-213ENST00000464867 TMEM131LA2VDJ0 1609 aa14.83□□□□□ -0.04
APP-213ENST00000464867 SPOCK2Q92563 424 aa14.82□□□□□ -0.04
APP-213ENST00000464867 RPRD2Q5VT52 1461 aaKnown RBP14.82□□□□□ -0.04
APP-213ENST00000464867 PSDA5PKW4 1024 aaPredicted RBP14.81□□□□□ -0.04
APP-213ENST00000464867 GSE1Q14687 1217 aa14.81□□□□□ -0.04
APP-213ENST00000464867 HRCP23327 699 aa14.8□□□□□ -0.04
APP-213ENST00000464867 CROCC2H7BZ55 1655 aa14.79□□□□□ -0.04
APP-213ENST00000464867 ANKRD30AQ9BXX3 1397 aa14.78□□□□□ -0.04
APP-213ENST00000464867 OTUD5Q96G74 571 aa14.78□□□□□ -0.04
APP-213ENST00000464867 PCDHB8Q9UN66 801 aa14.78□□□□□ -0.04
APP-213ENST00000464867 PTPRUQ92729 1446 aa14.77□□□□□ -0.04
APP-213ENST00000464867 SOS2Q07890 1332 aaPredicted RBP14.77□□□□□ -0.04
APP-213ENST00000464867 POTEFA5A3E0 1075 aa14.77□□□□□ -0.05
APP-213ENST00000464867 POTEJP0CG39 1038 aa14.77□□□□□ -0.05
APP-213ENST00000464867 UNC13BO14795 1591 aa14.77□□□□□ -0.05
APP-213ENST00000464867 ABCC5O15440 1437 aa14.76□□□□□ -0.05
APP-213ENST00000464867 BAG6P46379 1132 aa14.76□□□□□ -0.05
APP-213ENST00000464867 TRIM35Q9UPQ4 493 aa14.76□□□□□ -0.05
APP-213ENST00000464867 BCL9LQ86UU0 1499 aa14.76□□□□□ -0.05
APP-213ENST00000464867 ADGRL3Q9HAR2 1447 aa14.75□□□□□ -0.05
APP-213ENST00000464867 TMEM106CQ9BVX2 250 aa14.75□□□□□ -0.05
APP-213ENST00000464867 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
APP-213ENST00000464867 XRN1Q8IZH2 1706 aaKnown RBP14.74□□□□□ -0.05
APP-213ENST00000464867 LAMC1P11047 1609 aa14.74□□□□□ -0.05
APP-213ENST00000464867 COL22A1Q8NFW1 1626 aaPredicted RBP14.74□□□□□ -0.05
APP-213ENST00000464867 SPHKAPQ2M3C7 1700 aa14.73□□□□□ -0.05
APP-213ENST00000464867 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
APP-213ENST00000464867 C1orf167Q5SNV9 1468 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms