RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 ARHGEF28Q8N1W1 1705 aaKnown RBP26.3■■□□□ 1.8
POLR2J3-203ENST00000464525 SLC12A5Q9H2X9 1139 aa26.3■■□□□ 1.8
POLR2J3-203ENST00000464525 PTPRMP28827 1452 aa26.29■■□□□ 1.8
POLR2J3-203ENST00000464525 BLMP54132 1417 aaPredicted RBP26.29■■□□□ 1.8
POLR2J3-203ENST00000464525 RNF123Q5XPI4 1314 aa26.28■■□□□ 1.8
POLR2J3-203ENST00000464525 YTHDC2Q9H6S0 1430 aaKnown RBP26.28■■□□□ 1.8
POLR2J3-203ENST00000464525 PRKCSHP14314 528 aaPredicted RBP26.27■■□□□ 1.8
POLR2J3-203ENST00000464525 LTKP29376 864 aa26.26■■□□□ 1.79
POLR2J3-203ENST00000464525 HDGFP51858 240 aaKnown RBP26.26■■□□□ 1.79
POLR2J3-203ENST00000464525 NPC1L1Q9UHC9 1359 aa26.26■■□□□ 1.79
POLR2J3-203ENST00000464525 NRXN3Q9Y4C0 1643 aa26.25■■□□□ 1.79
POLR2J3-203ENST00000464525 WDR43Q15061 677 aaKnown RBP eCLIP26.24■■□□□ 1.79
POLR2J3-203ENST00000464525 PRAM1Q96QH2 718 aa26.24■■□□□ 1.79
POLR2J3-203ENST00000464525 TXNDC2Q86VQ3 553 aa26.23■■□□□ 1.79
POLR2J3-203ENST00000464525 ADAMTSL3P82987 1691 aa26.22■■□□□ 1.79
POLR2J3-203ENST00000464525 POGKQ9P215 609 aa26.22■■□□□ 1.79
POLR2J3-203ENST00000464525 SETD1AO15047 1707 aaKnown RBP26.22■■□□□ 1.79
POLR2J3-203ENST00000464525 METP08581 1390 aa26.22■■□□□ 1.79
POLR2J3-203ENST00000464525 MINK1Q8N4C8 1332 aaPredicted RBP26.2■■□□□ 1.79
POLR2J3-203ENST00000464525 PDE3BQ13370 1112 aa26.2■■□□□ 1.78
POLR2J3-203ENST00000464525 NSD3Q9BZ95 1437 aa26.19■■□□□ 1.78
POLR2J3-203ENST00000464525 INSRP06213 1382 aa26.19■■□□□ 1.78
POLR2J3-203ENST00000464525 CABP2Q9NPB3 220 aa26.19■■□□□ 1.78
POLR2J3-203ENST00000464525 TNNT2P45379 298 aaPredicted RBP26.18■■□□□ 1.78
POLR2J3-203ENST00000464525 WAPLQ7Z5K2 1190 aa26.17■■□□□ 1.78
POLR2J3-203ENST00000464525 RCAN3Q9UKA8 241 aa26.17■■□□□ 1.78
POLR2J3-203ENST00000464525 EID1Q9Y6B2 187 aa26.17■■□□□ 1.78
POLR2J3-203ENST00000464525 CCDC146Q8IYE0 955 aa26.16■■□□□ 1.78
POLR2J3-203ENST00000464525 THEMISQ8N1K5 641 aaPredicted RBP26.16■■□□□ 1.78
POLR2J3-203ENST00000464525 TULP4Q9NRJ4 1543 aa26.16■■□□□ 1.78
POLR2J3-203ENST00000464525 EVC2Q86UK5 1308 aa26.16■■□□□ 1.78
POLR2J3-203ENST00000464525 SLC26A8Q96RN1 970 aa26.15■■□□□ 1.78
POLR2J3-203ENST00000464525 PLEKHH1Q9ULM0 1364 aa26.14■■□□□ 1.77
POLR2J3-203ENST00000464525 ADAMTS13Q76LX8 1427 aa26.13■■□□□ 1.77
POLR2J3-203ENST00000464525 PLEKHG1Q9ULL1 1385 aa26.12■■□□□ 1.77
POLR2J3-203ENST00000464525 RRP1P56182 461 aaKnown RBP26.12■■□□□ 1.77
POLR2J3-203ENST00000464525 RBM19Q9Y4C8 960 aaKnown RBP26.12■■□□□ 1.77
POLR2J3-203ENST00000464525 SLIT1O75093 1534 aa26.12■■□□□ 1.77
POLR2J3-203ENST00000464525 ARHGAP23Q9P227 1491 aa26.12■■□□□ 1.77
POLR2J3-203ENST00000464525 CEP170BQ9Y4F5 1589 aaPredicted RBP26.11■■□□□ 1.77
POLR2J3-203ENST00000464525 MORC1Q86VD1 984 aa26.11■■□□□ 1.77
POLR2J3-203ENST00000464525 SRPK2P78362 688 aaKnown RBP26.11■■□□□ 1.77
POLR2J3-203ENST00000464525 ABCC11Q96J66 1382 aa26.1■■□□□ 1.77
POLR2J3-203ENST00000464525 DLC1Q96QB1 1528 aa26.06■■□□□ 1.76
POLR2J3-203ENST00000464525 CCDC136Q96JN2 1154 aa26.06■■□□□ 1.76
POLR2J3-203ENST00000464525 APAF1O14727 1248 aa26.05■■□□□ 1.76
POLR2J3-203ENST00000464525 PLIN1O60240 522 aa26.05■■□□□ 1.76
POLR2J3-203ENST00000464525 EXOC6Q8TAG9 804 aa26.04■■□□□ 1.76
POLR2J3-203ENST00000464525 CDK19Q9BWU1 502 aa26.04■■□□□ 1.76
POLR2J3-203ENST00000464525 CGNL1Q0VF96 1302 aa26.02■■□□□ 1.76
POLR2J3-203ENST00000464525 ZNF521Q96K83 1311 aa26.02■■□□□ 1.76
POLR2J3-203ENST00000464525 PUS7Q96PZ0 661 aaKnown RBP26.02■■□□□ 1.76
POLR2J3-203ENST00000464525 ANKRD36BQ8N2N9 1353 aa26.01■■□□□ 1.75
POLR2J3-203ENST00000464525 SETD1BQ9UPS6 1966 aaKnown RBP26■■□□□ 1.75
POLR2J3-203ENST00000464525 MED14O60244 1454 aa26■■□□□ 1.75
POLR2J3-203ENST00000464525 ROBO2Q9HCK4 1378 aa26■■□□□ 1.75
POLR2J3-203ENST00000464525 PTPRUQ92729 1446 aa25.99■■□□□ 1.75
POLR2J3-203ENST00000464525 POLR3AO14802 1390 aaPredicted RBP25.99■■□□□ 1.75
POLR2J3-203ENST00000464525 DUSP27Q5VZP5 1158 aa25.99■■□□□ 1.75
POLR2J3-203ENST00000464525 GOLGA2Q08379 1002 aa25.98■■□□□ 1.75
POLR2J3-203ENST00000464525 MTHFSP49914 203 aa25.98■■□□□ 1.75
POLR2J3-203ENST00000464525 A0A1W2PP64 1363 aa25.98■■□□□ 1.75
POLR2J3-203ENST00000464525 SPINK5Q9NQ38 1064 aaPredicted RBP25.97■■□□□ 1.75
POLR2J3-203ENST00000464525 TECPR2O15040 1411 aa25.97■■□□□ 1.75
POLR2J3-203ENST00000464525 KNDC1Q76NI1 1749 aa25.96■■□□□ 1.75
POLR2J3-203ENST00000464525 TBX22Q9Y458 520 aa25.96■■□□□ 1.75
POLR2J3-203ENST00000464525 ZNF142P52746 1687 aaPredicted RBP25.96■■□□□ 1.75
POLR2J3-203ENST00000464525 AMOTL2Q9Y2J4 779 aa25.96■■□□□ 1.75
POLR2J3-203ENST00000464525 CPS1P31327 1500 aa25.95■■□□□ 1.75
POLR2J3-203ENST00000464525 ANKLE2Q86XL3 938 aa25.95■■□□□ 1.74
POLR2J3-203ENST00000464525 FAM135BQ49AJ0 1406 aa25.95■■□□□ 1.74
POLR2J3-203ENST00000464525 DMRT2Q9Y5R5 561 aa25.94■■□□□ 1.74
POLR2J3-203ENST00000464525 ATAD2Q6PL18 1390 aa25.94■■□□□ 1.74
POLR2J3-203ENST00000464525 USP32Q8NFA0 1604 aa25.93■■□□□ 1.74
POLR2J3-203ENST00000464525 GGNBP2Q9H3C7 697 aa25.93■■□□□ 1.74
POLR2J3-203ENST00000464525 SLFN5Q08AF3 891 aa25.92■■□□□ 1.74
POLR2J3-203ENST00000464525 SIRT1Q96EB6 747 aa25.92■■□□□ 1.74
POLR2J3-203ENST00000464525 WASLO00401 505 aaPredicted RBP25.92■■□□□ 1.74
POLR2J3-203ENST00000464525 CABP1Q9NZU7 370 aa25.92■■□□□ 1.74
POLR2J3-203ENST00000464525 SHPRHQ149N8 1683 aa25.9■■□□□ 1.74
POLR2J3-203ENST00000464525 NEUROD2Q15784 382 aa25.89■■□□□ 1.74
POLR2J3-203ENST00000464525 C20orf194Q5TEA3 1177 aa25.89■■□□□ 1.74
POLR2J3-203ENST00000464525 RRP7AQ9Y3A4 280 aaKnown RBP25.89■■□□□ 1.73
POLR2J3-203ENST00000464525 NCKAP5LQ9HCH0 1330 aa25.89■■□□□ 1.73
POLR2J3-203ENST00000464525 CD163L1Q9NR16 1453 aa25.87■■□□□ 1.73
POLR2J3-203ENST00000464525 NUTM2FA1L443 756 aa25.86■■□□□ 1.73
POLR2J3-203ENST00000464525 TRMT2AQ8IZ69 625 aaKnown RBP25.86■■□□□ 1.73
POLR2J3-203ENST00000464525 CRBNQ96SW2 442 aa25.86■■□□□ 1.73
POLR2J3-203ENST00000464525 TERF2IPQ9NYB0 399 aa25.86■■□□□ 1.73
POLR2J3-203ENST00000464525 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.86■■□□□ 1.73
POLR2J3-203ENST00000464525 NINLQ9Y2I6 1382 aa25.86■■□□□ 1.73
POLR2J3-203ENST00000464525 FYB1O15117 783 aa25.86■■□□□ 1.73
POLR2J3-203ENST00000464525 DIP2AQ14689 1571 aa25.85■■□□□ 1.73
POLR2J3-203ENST00000464525 KCNA6P17658 529 aa25.85■■□□□ 1.73
POLR2J3-203ENST00000464525 NSD2O96028 1365 aa25.84■■□□□ 1.73
POLR2J3-203ENST00000464525 NUDT16Q96DE0 195 aaKnown RBP25.83■■□□□ 1.73
POLR2J3-203ENST00000464525 CFAP53Q96M91 514 aa25.83■■□□□ 1.73
POLR2J3-203ENST00000464525 WWC1Q8IX03 1113 aa25.82■■□□□ 1.72
POLR2J3-203ENST00000464525 TCP11L2Q8N4U5 519 aa25.82■■□□□ 1.72
POLR2J3-203ENST00000464525 HDGFL2Q7Z4V5 671 aaPredicted RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 1439.6 ms