RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 ADAMTS2O95450 1211 aa35.64■■■■□ 3.3
TTC3-212ENST00000463216 ACIN1Q9UKV3 1341 aaKnown RBP35.63■■■■□ 3.29
TTC3-212ENST00000463216 NUTM2FA1L443 756 aa35.63■■■■□ 3.29
TTC3-212ENST00000463216 LRPPRCP42704 1394 aaKnown RBP35.62■■■■□ 3.29
TTC3-212ENST00000463216 SOS2Q07890 1332 aaPredicted RBP35.61■■■■□ 3.29
TTC3-212ENST00000463216 LAMC1P11047 1609 aa35.6■■■■□ 3.29
TTC3-212ENST00000463216 CDC42BPGQ6DT37 1551 aa35.59■■■■□ 3.29
TTC3-212ENST00000463216 PIK3C2GO75747 1445 aa35.59■■■■□ 3.29
TTC3-212ENST00000463216 NGLY1Q96IV0 654 aa35.58■■■■□ 3.29
TTC3-212ENST00000463216 RAB3GAP2Q9H2M9 1393 aa35.58■■■■□ 3.29
TTC3-212ENST00000463216 PLEKHH1Q9ULM0 1364 aa35.56■■■■□ 3.28
TTC3-212ENST00000463216 TECPR2O15040 1411 aa35.56■■■■□ 3.28
TTC3-212ENST00000463216 ABCC11Q96J66 1382 aa35.55■■■■□ 3.28
TTC3-212ENST00000463216 QTRT2Q9H974 415 aaKnown RBP35.55■■■■□ 3.28
TTC3-212ENST00000463216 XPCQ01831 940 aaPredicted RBP35.54■■■■□ 3.28
TTC3-212ENST00000463216 NPHP3Q7Z494 1330 aa35.54■■■■□ 3.28
TTC3-212ENST00000463216 FOXO3O43524 673 aa35.53■■■■□ 3.28
TTC3-212ENST00000463216 KNDC1Q76NI1 1749 aa35.53■■■■□ 3.28
TTC3-212ENST00000463216 YTHDC2Q9H6S0 1430 aaKnown RBP35.53■■■■□ 3.28
TTC3-212ENST00000463216 CFAP70Q5T0N1 1121 aa35.5■■■■□ 3.27
TTC3-212ENST00000463216 C14orf93Q9H972 538 aaKnown RBP35.49■■■■□ 3.27
TTC3-212ENST00000463216 UPF1Q92900 1129 aaKnown RBP eCLIP35.47■■■■□ 3.27
TTC3-212ENST00000463216 RBM6P78332 1123 aaKnown RBP35.46■■■■□ 3.27
TTC3-212ENST00000463216 DHX57Q6P158 1386 aaKnown RBP35.45■■■■□ 3.27
TTC3-212ENST00000463216 CDK12Q9NYV4 1490 aaPredicted RBP35.45■■■■□ 3.27
TTC3-212ENST00000463216 USP21Q9UK80 565 aa35.44■■■■□ 3.26
TTC3-212ENST00000463216 MYOM2P54296 1465 aa35.43■■■■□ 3.26
TTC3-212ENST00000463216 PXDNQ92626 1479 aa35.43■■■■□ 3.26
TTC3-212ENST00000463216 SAFB2Q14151 953 aaKnown RBP eCLIP35.43■■■■□ 3.26
TTC3-212ENST00000463216 FMN2Q9NZ56 1722 aa35.41■■■■□ 3.26
TTC3-212ENST00000463216 COL22A1Q8NFW1 1626 aaPredicted RBP35.41■■■■□ 3.26
TTC3-212ENST00000463216 NRXN1Q9ULB1 1477 aa35.41■■■■□ 3.26
TTC3-212ENST00000463216 RGS12O14924 1447 aa35.39■■■■□ 3.26
TTC3-212ENST00000463216 SIRT1Q96EB6 747 aa35.38■■■■□ 3.25
TTC3-212ENST00000463216 KDM2AQ9Y2K7 1162 aa35.38■■■■□ 3.25
TTC3-212ENST00000463216 PRAM1Q96QH2 718 aa35.37■■■■□ 3.25
TTC3-212ENST00000463216 POGKQ9P215 609 aa35.35■■■■□ 3.25
TTC3-212ENST00000463216 TRPC5Q9UL62 973 aaPredicted RBP35.35■■■■□ 3.25
TTC3-212ENST00000463216 RGPD8O14715 1765 aaPredicted RBP35.33■■■■□ 3.25
TTC3-212ENST00000463216 KIF1AQ12756 1690 aa35.33■■■■□ 3.25
TTC3-212ENST00000463216 KRT28Q7Z3Y7 464 aa35.32■■■■□ 3.24
TTC3-212ENST00000463216 FNBP4Q8N3X1 1017 aaPredicted RBP35.32■■■■□ 3.24
TTC3-212ENST00000463216 DCAF11Q8TEB1 546 aa35.31■■■■□ 3.24
TTC3-212ENST00000463216 PHF8Q9UPP1 1060 aa35.3■■■■□ 3.24
TTC3-212ENST00000463216 PLEKHG5O94827 1062 aa35.29■■■■□ 3.24
TTC3-212ENST00000463216 TRAK1Q9UPV9 953 aa35.29■■■■□ 3.24
TTC3-212ENST00000463216 SPATA31A3Q5VYP0 1347 aa35.28■■■■□ 3.24
TTC3-212ENST00000463216 MARF1Q9Y4F3 1742 aaKnown RBP35.27■■■■□ 3.24
TTC3-212ENST00000463216 ATRNO75882 1429 aa35.23■■■■□ 3.23
TTC3-212ENST00000463216 HAP1P54257 671 aaPredicted RBP35.23■■■■□ 3.23
TTC3-212ENST00000463216 PSME1Q06323 249 aa35.23■■■■□ 3.23
TTC3-212ENST00000463216 LMOD2Q6P5Q4 547 aa35.23■■■■□ 3.23
TTC3-212ENST00000463216 HIRIP3Q9BW71 556 aaPredicted RBP35.23■■■■□ 3.23
TTC3-212ENST00000463216 DLC1Q96QB1 1528 aa35.22■■■■□ 3.23
TTC3-212ENST00000463216 PMFBP1Q8TBY8 1022 aa35.21■■■■□ 3.23
TTC3-212ENST00000463216 ADGRB1O14514 1584 aa35.2■■■■□ 3.23
TTC3-212ENST00000463216 BCL9LQ86UU0 1499 aa35.19■■■■□ 3.22
TTC3-212ENST00000463216 MINK1Q8N4C8 1332 aaPredicted RBP35.19■■■■□ 3.22
TTC3-212ENST00000463216 HRCP23327 699 aa35.18■■■■□ 3.22
TTC3-212ENST00000463216 TNS3Q68CZ2 1445 aa35.16■■■■□ 3.22
TTC3-212ENST00000463216 CABLES1Q8TDN4 633 aa35.16■■■■□ 3.22
TTC3-212ENST00000463216 ATAD2Q6PL18 1390 aa35.15■■■■□ 3.22
TTC3-212ENST00000463216 GJD4Q96KN9 370 aaPredicted RBP35.13■■■■□ 3.21
TTC3-212ENST00000463216 USP32Q8NFA0 1604 aa35.12■■■■□ 3.21
TTC3-212ENST00000463216 UNC5CLQ8IV45 518 aa35.11■■■■□ 3.21
TTC3-212ENST00000463216 ANKARQ7Z5J8 1434 aa35.11■■■■□ 3.21
TTC3-212ENST00000463216 ADGRB2O60241 1585 aa35.1■■■■□ 3.21
TTC3-212ENST00000463216 STAC3Q96MF2 364 aa35.1■■■■□ 3.21
TTC3-212ENST00000463216 SBNO1A3KN83 1393 aa35.09■■■■□ 3.21
TTC3-212ENST00000463216 ARHGEF10O15013 1369 aa35.06■■■■□ 3.2
TTC3-212ENST00000463216 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.06■■■■□ 3.2
TTC3-212ENST00000463216 WASLO00401 505 aaPredicted RBP35.05■■■■□ 3.2
TTC3-212ENST00000463216 SLIT2O94813 1529 aa35.05■■■■□ 3.2
TTC3-212ENST00000463216 EIF3AQ14152 1382 aaKnown RBP35.04■■■■□ 3.2
TTC3-212ENST00000463216 PRR36Q9H6K5 1346 aa35.03■■■■□ 3.2
TTC3-212ENST00000463216 GPRASP1Q5JY77 1395 aa35.02■■■■□ 3.2
TTC3-212ENST00000463216 CCDC9Q9Y3X0 531 aaKnown RBP35.01■■■■□ 3.2
TTC3-212ENST00000463216 RALGAPBQ86X10 1494 aa35.01■■■■□ 3.19
TTC3-212ENST00000463216 TULP4Q9NRJ4 1543 aa35.01■■■■□ 3.19
TTC3-212ENST00000463216 NGDNQ8NEJ9 315 aaKnown RBP34.99■■■■□ 3.19
TTC3-212ENST00000463216 ARHGEF28Q8N1W1 1705 aaKnown RBP34.98■■■■□ 3.19
TTC3-212ENST00000463216 ABCA3Q99758 1704 aa34.98■■■■□ 3.19
TTC3-212ENST00000463216 GLI3P10071 1580 aa34.97■■■■□ 3.19
TTC3-212ENST00000463216 PAK3O75914 559 aaPredicted RBP34.97■■■■□ 3.19
TTC3-212ENST00000463216 PLCH1Q4KWH8 1693 aa34.97■■■■□ 3.19
TTC3-212ENST00000463216 TRPM3Q9HCF6 1732 aaPredicted RBP34.95■■■■□ 3.18
TTC3-212ENST00000463216 FAM83GA6ND36 823 aa34.93■■■■□ 3.18
TTC3-212ENST00000463216 VPS72Q15906 364 aa34.92■■■■□ 3.18
TTC3-212ENST00000463216 EP400Q96L91 3159 aa34.9■■■■□ 3.18
TTC3-212ENST00000463216 NWD2Q9ULI1 1742 aa34.9■■■■□ 3.18
TTC3-212ENST00000463216 NUDT16Q96DE0 195 aaKnown RBP34.9■■■■□ 3.18
TTC3-212ENST00000463216 ALS2Q96Q42 1657 aa34.89■■■■□ 3.18
TTC3-212ENST00000463216 SEPT12Q8IYM1 358 aa34.88■■■■□ 3.17
TTC3-212ENST00000463216 CDK19Q9BWU1 502 aa34.87■■■■□ 3.17
TTC3-212ENST00000463216 ITSN1Q15811 1721 aa34.86■■■■□ 3.17
TTC3-212ENST00000463216 BRWD3Q6RI45 1802 aa34.86■■■■□ 3.17
TTC3-212ENST00000463216 A0A0G2JS52 829 aa34.86■■■■□ 3.17
TTC3-212ENST00000463216 MYT1Q01538 1121 aa34.86■■■■□ 3.17
TTC3-212ENST00000463216 CCDC125Q86Z20 511 aa34.86■■■■□ 3.17
TTC3-212ENST00000463216 NBPF1Q3BBV0 1214 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms