RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 NRXN3Q9Y4C0 1643 aa13.59□□□□□ -0.23
MSH5-211ENST00000463144 ANKRD36BQ8N2N9 1353 aa13.57□□□□□ -0.24
MSH5-211ENST00000463144 TNRQ92752 1358 aa13.57□□□□□ -0.24
MSH5-211ENST00000463144 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
MSH5-211ENST00000463144 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
MSH5-211ENST00000463144 CDCA7LQ96GN5 454 aa13.57□□□□□ -0.24
MSH5-211ENST00000463144 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
MSH5-211ENST00000463144 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSH5-211ENST00000463144 POGKQ9P215 609 aa13.57□□□□□ -0.24
MSH5-211ENST00000463144 UBR1Q8IWV7 1749 aa13.56□□□□□ -0.24
MSH5-211ENST00000463144 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
MSH5-211ENST00000463144 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
MSH5-211ENST00000463144 MORC1Q86VD1 984 aa13.55□□□□□ -0.24
MSH5-211ENST00000463144 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
MSH5-211ENST00000463144 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.54□□□□□ -0.24
MSH5-211ENST00000463144 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
MSH5-211ENST00000463144 PLEKHH1Q9ULM0 1364 aa13.54□□□□□ -0.24
MSH5-211ENST00000463144 CGNL1Q0VF96 1302 aa13.54□□□□□ -0.24
MSH5-211ENST00000463144 A0A1W2PP64 1363 aa13.53□□□□□ -0.24
MSH5-211ENST00000463144 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
MSH5-211ENST00000463144 METP08581 1390 aa13.53□□□□□ -0.24
MSH5-211ENST00000463144 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
MSH5-211ENST00000463144 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
MSH5-211ENST00000463144 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
MSH5-211ENST00000463144 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
MSH5-211ENST00000463144 CD163L1Q9NR16 1453 aa13.53□□□□□ -0.24
MSH5-211ENST00000463144 TNNT2P45379 298 aaPredicted RBP13.52□□□□□ -0.24
MSH5-211ENST00000463144 ATAD2Q6PL18 1390 aa13.52□□□□□ -0.24
MSH5-211ENST00000463144 NINLQ9Y2I6 1382 aa13.52□□□□□ -0.24
MSH5-211ENST00000463144 SHPRHQ149N8 1683 aa13.52□□□□□ -0.25
MSH5-211ENST00000463144 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
MSH5-211ENST00000463144 ZNF521Q96K83 1311 aa13.51□□□□□ -0.25
MSH5-211ENST00000463144 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
MSH5-211ENST00000463144 C3P01024 1663 aa13.51□□□□□ -0.25
MSH5-211ENST00000463144 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
MSH5-211ENST00000463144 NSD2O96028 1365 aa13.5□□□□□ -0.25
MSH5-211ENST00000463144 MTHFSP49914 203 aa13.48□□□□□ -0.25
MSH5-211ENST00000463144 HDGFP51858 240 aaKnown RBP13.48□□□□□ -0.25
MSH5-211ENST00000463144 KNDC1Q76NI1 1749 aa13.48□□□□□ -0.25
MSH5-211ENST00000463144 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
MSH5-211ENST00000463144 TXNDC2Q86VQ3 553 aa13.48□□□□□ -0.25
MSH5-211ENST00000463144 APAF1O14727 1248 aa13.47□□□□□ -0.25
MSH5-211ENST00000463144 LTKP29376 864 aa13.47□□□□□ -0.25
MSH5-211ENST00000463144 TERF2IPQ9NYB0 399 aa13.47□□□□□ -0.25
MSH5-211ENST00000463144 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
MSH5-211ENST00000463144 NLRP1Q9C000 1473 aa13.47□□□□□ -0.25
MSH5-211ENST00000463144 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
MSH5-211ENST00000463144 ADAMTS13Q76LX8 1427 aa13.47□□□□□ -0.25
MSH5-211ENST00000463144 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
MSH5-211ENST00000463144 ANKRD26Q9UPS8 1709 aa13.46□□□□□ -0.25
MSH5-211ENST00000463144 FYB1O15117 783 aa13.46□□□□□ -0.25
MSH5-211ENST00000463144 TECPR2O15040 1411 aa13.46□□□□□ -0.25
MSH5-211ENST00000463144 GGNBP2Q9H3C7 697 aa13.46□□□□□ -0.26
MSH5-211ENST00000463144 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
MSH5-211ENST00000463144 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
MSH5-211ENST00000463144 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
MSH5-211ENST00000463144 CPS1P31327 1500 aa13.44□□□□□ -0.26
MSH5-211ENST00000463144 WASLO00401 505 aaPredicted RBP13.44□□□□□ -0.26
MSH5-211ENST00000463144 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
MSH5-211ENST00000463144 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
MSH5-211ENST00000463144 MED14O60244 1454 aa13.43□□□□□ -0.26
MSH5-211ENST00000463144 PLEKHG1Q9ULL1 1385 aa13.43□□□□□ -0.26
MSH5-211ENST00000463144 SLFN5Q08AF3 891 aa13.43□□□□□ -0.26
MSH5-211ENST00000463144 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
MSH5-211ENST00000463144 TRMT2AQ8IZ69 625 aaKnown RBP13.43□□□□□ -0.26
MSH5-211ENST00000463144 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
MSH5-211ENST00000463144 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
MSH5-211ENST00000463144 ATP7BP35670 1465 aa13.42□□□□□ -0.26
MSH5-211ENST00000463144 ROBO2Q9HCK4 1378 aa13.42□□□□□ -0.26
MSH5-211ENST00000463144 ARHGAP23Q9P227 1491 aa13.41□□□□□ -0.26
MSH5-211ENST00000463144 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
MSH5-211ENST00000463144 DMRT2Q9Y5R5 561 aa13.41□□□□□ -0.26
MSH5-211ENST00000463144 SLIT1O75093 1534 aa13.41□□□□□ -0.26
MSH5-211ENST00000463144 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
MSH5-211ENST00000463144 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.4□□□□□ -0.26
MSH5-211ENST00000463144 PLIN1O60240 522 aa13.4□□□□□ -0.26
MSH5-211ENST00000463144 EXOC6Q8TAG9 804 aa13.4□□□□□ -0.26
MSH5-211ENST00000463144 RUNDC1Q96C34 613 aa13.4□□□□□ -0.26
MSH5-211ENST00000463144 CPSF1Q10570 1443 aaKnown RBP13.4□□□□□ -0.26
MSH5-211ENST00000463144 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.27
MSH5-211ENST00000463144 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.27
MSH5-211ENST00000463144 NUDT16Q96DE0 195 aaKnown RBP13.39□□□□□ -0.27
MSH5-211ENST00000463144 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
MSH5-211ENST00000463144 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
MSH5-211ENST00000463144 NGEFQ8N5V2 710 aa13.39□□□□□ -0.27
MSH5-211ENST00000463144 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
MSH5-211ENST00000463144 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
MSH5-211ENST00000463144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.27
MSH5-211ENST00000463144 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
MSH5-211ENST00000463144 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
MSH5-211ENST00000463144 PRR36Q9H6K5 1346 aa13.37□□□□□ -0.27
MSH5-211ENST00000463144 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
MSH5-211ENST00000463144 CCDC136Q96JN2 1154 aa13.37□□□□□ -0.27
MSH5-211ENST00000463144 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
MSH5-211ENST00000463144 CDC42BPGQ6DT37 1551 aa13.36□□□□□ -0.27
MSH5-211ENST00000463144 RRP7AQ9Y3A4 280 aaKnown RBP13.36□□□□□ -0.27
MSH5-211ENST00000463144 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
MSH5-211ENST00000463144 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
MSH5-211ENST00000463144 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
MSH5-211ENST00000463144 E9PSI1 815 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms