RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 ESCO1Q5FWF5 840 aa22.93■■□□□ 1.26
SF3A3-203ENST00000461869 FNBP4Q8N3X1 1017 aaPredicted RBP22.93■■□□□ 1.26
SF3A3-203ENST00000461869 ATAD2Q6PL18 1390 aa22.9■■□□□ 1.26
SF3A3-203ENST00000461869 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
SF3A3-203ENST00000461869 PPLO60437 1756 aa22.9■■□□□ 1.26
SF3A3-203ENST00000461869 FOXD1Q16676 465 aa22.88■■□□□ 1.25
SF3A3-203ENST00000461869 ADGRF5Q8IZF2 1346 aa22.87■■□□□ 1.25
SF3A3-203ENST00000461869 COL22A1Q8NFW1 1626 aaPredicted RBP22.87■■□□□ 1.25
SF3A3-203ENST00000461869 FOXO3O43524 673 aa22.87■■□□□ 1.25
SF3A3-203ENST00000461869 ATRNO75882 1429 aa22.87■■□□□ 1.25
SF3A3-203ENST00000461869 CDC42BPGQ6DT37 1551 aa22.86■■□□□ 1.25
SF3A3-203ENST00000461869 XPCQ01831 940 aaPredicted RBP22.86■■□□□ 1.25
SF3A3-203ENST00000461869 STK26Q9P289 416 aa22.86■■□□□ 1.25
SF3A3-203ENST00000461869 MYOM2P54296 1465 aa22.85■■□□□ 1.25
SF3A3-203ENST00000461869 RGL3Q3MIN7 710 aa22.85■■□□□ 1.25
SF3A3-203ENST00000461869 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
SF3A3-203ENST00000461869 PXDNQ92626 1479 aa22.85■■□□□ 1.25
SF3A3-203ENST00000461869 NUTM2FA1L443 756 aa22.84■■□□□ 1.25
SF3A3-203ENST00000461869 LRPPRCP42704 1394 aaKnown RBP22.83■■□□□ 1.25
SF3A3-203ENST00000461869 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
SF3A3-203ENST00000461869 BCL9LQ86UU0 1499 aa22.81■■□□□ 1.24
SF3A3-203ENST00000461869 TMEM132EQ6IEE7 984 aa22.8■■□□□ 1.24
SF3A3-203ENST00000461869 TECPR2O15040 1411 aa22.8■■□□□ 1.24
SF3A3-203ENST00000461869 ANKRD30BQ9BXX2 1392 aa22.79■■□□□ 1.24
SF3A3-203ENST00000461869 ABCC11Q96J66 1382 aa22.78■■□□□ 1.24
SF3A3-203ENST00000461869 GJD4Q96KN9 370 aaPredicted RBP22.78■■□□□ 1.24
SF3A3-203ENST00000461869 PLEKHH1Q9ULM0 1364 aa22.77■■□□□ 1.24
SF3A3-203ENST00000461869 SPATA31E1Q6ZUB1 1445 aa22.77■■□□□ 1.24
SF3A3-203ENST00000461869 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
SF3A3-203ENST00000461869 ZRANB1Q9UGI0 708 aa22.76■■□□□ 1.23
SF3A3-203ENST00000461869 CCDC125Q86Z20 511 aa22.75■■□□□ 1.23
SF3A3-203ENST00000461869 MARF1Q9Y4F3 1742 aaKnown RBP22.74■■□□□ 1.23
SF3A3-203ENST00000461869 SPATA31A3Q5VYP0 1347 aa22.74■■□□□ 1.23
SF3A3-203ENST00000461869 UNC5CLQ8IV45 518 aa22.73■■□□□ 1.23
SF3A3-203ENST00000461869 KRT28Q7Z3Y7 464 aa22.72■■□□□ 1.23
SF3A3-203ENST00000461869 PIK3C2GO75747 1445 aa22.72■■□□□ 1.23
SF3A3-203ENST00000461869 YTHDC2Q9H6S0 1430 aaKnown RBP22.72■■□□□ 1.23
SF3A3-203ENST00000461869 KNDC1Q76NI1 1749 aa22.71■■□□□ 1.23
SF3A3-203ENST00000461869 IFT172Q9UG01 1749 aa22.71■■□□□ 1.23
SF3A3-203ENST00000461869 HRCP23327 699 aa22.7■■□□□ 1.22
SF3A3-203ENST00000461869 RAB3GAP2Q9H2M9 1393 aa22.7■■□□□ 1.22
SF3A3-203ENST00000461869 FMN2Q9NZ56 1722 aa22.69■■□□□ 1.22
SF3A3-203ENST00000461869 SIRT1Q96EB6 747 aa22.69■■□□□ 1.22
SF3A3-203ENST00000461869 SLIT2O94813 1529 aa22.68■■□□□ 1.22
SF3A3-203ENST00000461869 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
SF3A3-203ENST00000461869 HAP1P54257 671 aaPredicted RBP22.68■■□□□ 1.22
SF3A3-203ENST00000461869 KIF1AQ12756 1690 aa22.68■■□□□ 1.22
SF3A3-203ENST00000461869 RALGAPBQ86X10 1494 aa22.67■■□□□ 1.22
SF3A3-203ENST00000461869 PSME1Q06323 249 aa22.67■■□□□ 1.22
SF3A3-203ENST00000461869 C14orf93Q9H972 538 aaKnown RBP22.67■■□□□ 1.22
SF3A3-203ENST00000461869 PHF8Q9UPP1 1060 aa22.67■■□□□ 1.22
SF3A3-203ENST00000461869 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.67■■□□□ 1.22
SF3A3-203ENST00000461869 GLI3P10071 1580 aa22.64■■□□□ 1.22
SF3A3-203ENST00000461869 PLEKHG5O94827 1062 aa22.64■■□□□ 1.21
SF3A3-203ENST00000461869 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
SF3A3-203ENST00000461869 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
SF3A3-203ENST00000461869 CABLES1Q8TDN4 633 aa22.63■■□□□ 1.21
SF3A3-203ENST00000461869 USP32Q8NFA0 1604 aa22.63■■□□□ 1.21
SF3A3-203ENST00000461869 TNS3Q68CZ2 1445 aa22.63■■□□□ 1.21
SF3A3-203ENST00000461869 LMOD2Q6P5Q4 547 aa22.62■■□□□ 1.21
SF3A3-203ENST00000461869 BLMP54132 1417 aaPredicted RBP22.62■■□□□ 1.21
SF3A3-203ENST00000461869 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
SF3A3-203ENST00000461869 VPS72Q15906 364 aa22.61■■□□□ 1.21
SF3A3-203ENST00000461869 SEPT12Q8IYM1 358 aa22.61■■□□□ 1.21
SF3A3-203ENST00000461869 PRAM1Q96QH2 718 aa22.61■■□□□ 1.21
SF3A3-203ENST00000461869 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
SF3A3-203ENST00000461869 CCDC9Q9Y3X0 531 aaKnown RBP22.6■■□□□ 1.21
SF3A3-203ENST00000461869 SBNO1A3KN83 1393 aa22.6■■□□□ 1.21
SF3A3-203ENST00000461869 RGPD8O14715 1765 aaPredicted RBP22.58■■□□□ 1.21
SF3A3-203ENST00000461869 SF3B2Q13435 895 aaKnown RBP22.58■■□□□ 1.21
SF3A3-203ENST00000461869 NRXN1Q9ULB1 1477 aa22.58■■□□□ 1.2
SF3A3-203ENST00000461869 EP400Q96L91 3159 aa22.58■■□□□ 1.2
SF3A3-203ENST00000461869 DEFB132Q7Z7B7 95 aa22.57■■□□□ 1.2
SF3A3-203ENST00000461869 POGKQ9P215 609 aa22.57■■□□□ 1.2
SF3A3-203ENST00000461869 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
SF3A3-203ENST00000461869 PMFBP1Q8TBY8 1022 aa22.56■■□□□ 1.2
SF3A3-203ENST00000461869 ONECUT3O60422 494 aaPredicted RBP22.55■■□□□ 1.2
SF3A3-203ENST00000461869 FAM83GA6ND36 823 aa22.54■■□□□ 1.2
SF3A3-203ENST00000461869 SRCAPQ6ZRS2 3230 aa22.54■■□□□ 1.2
SF3A3-203ENST00000461869 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
SF3A3-203ENST00000461869 KRT27Q7Z3Y8 459 aa22.53■■□□□ 1.2
SF3A3-203ENST00000461869 CLSPNQ9HAW4 1339 aa22.53■■□□□ 1.2
SF3A3-203ENST00000461869 NWD2Q9ULI1 1742 aa22.52■■□□□ 1.2
SF3A3-203ENST00000461869 ANKARQ7Z5J8 1434 aa22.52■■□□□ 1.2
SF3A3-203ENST00000461869 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.2
SF3A3-203ENST00000461869 PLCH1Q4KWH8 1693 aa22.52■■□□□ 1.2
SF3A3-203ENST00000461869 A0A0G2JS52 829 aa22.5■■□□□ 1.19
SF3A3-203ENST00000461869 MYT1Q01538 1121 aa22.5■■□□□ 1.19
SF3A3-203ENST00000461869 DLC1Q96QB1 1528 aa22.5■■□□□ 1.19
SF3A3-203ENST00000461869 ABCA3Q99758 1704 aa22.49■■□□□ 1.19
SF3A3-203ENST00000461869 HIRIP3Q9BW71 556 aaPredicted RBP22.49■■□□□ 1.19
SF3A3-203ENST00000461869 TRAK1Q9UPV9 953 aa22.49■■□□□ 1.19
SF3A3-203ENST00000461869 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
SF3A3-203ENST00000461869 GPRASP1Q5JY77 1395 aa22.47■■□□□ 1.19
SF3A3-203ENST00000461869 FAM98CQ17RN3 349 aaKnown RBP22.46■■□□□ 1.19
SF3A3-203ENST00000461869 MINK1Q8N4C8 1332 aaPredicted RBP22.46■■□□□ 1.19
SF3A3-203ENST00000461869 ADGRB2O60241 1585 aa22.46■■□□□ 1.19
SF3A3-203ENST00000461869 ADGRB1O14514 1584 aa22.44■■□□□ 1.18
SF3A3-203ENST00000461869 EIF3AQ14152 1382 aaKnown RBP22.44■■□□□ 1.18
SF3A3-203ENST00000461869 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms