RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 MFSD10Q14728 455 aa6.95□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 FBXO31Q5XUX0 539 aaPredicted RBP6.95□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 ACIN1Q9UKV3 1341 aaKnown RBP6.95□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 PTPRTO14522 1441 aa6.94□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 A6NJR5 290 aa6.94□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 PDE4AP27815 886 aa6.94□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 NUP155O75694 1391 aa6.94□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 KDM5AP29375 1690 aaKnown RBP6.93□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 STRCQ7RTU9 1775 aa6.93□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 CAMK2BQ13554 666 aa6.93□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 GPIHBP1Q8IV16 184 aa6.93□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 SYNMO15061 1565 aa6.93□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 UGGT1Q9NYU2 1555 aa6.93□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 SOX12O15370 315 aa6.92□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 PPP1R37O75864 691 aa6.92□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 NLRP6P59044 892 aa6.92□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 THEMISQ8N1K5 641 aaPredicted RBP6.92□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 GOPCQ9HD26 462 aa6.92□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 SLC52A1Q9NWF4 448 aa6.92□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 ARHGAP23Q9P227 1491 aa6.92□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 SLIT1O75093 1534 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 PIK3C2BO00750 1634 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 E9PCH4 1651 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 UBR1Q8IWV7 1749 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 PRR29P0C7W0 189 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 FBXO22Q8NEZ5 403 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 DDRGK1Q96HY6 314 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 NCKAP5LQ9HCH0 1330 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 MED14O60244 1454 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 ADGRB3O60242 1522 aa6.91□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 NECTIN2Q92692 538 aa6.9□□□□□ -1.3
RNU6ATAC28P-201ENST00000459249 SETD5Q9C0A6 1442 aa6.9□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 NEURL4Q96JN8 1562 aa6.9□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 ZNF316A6NFI3 1004 aaPredicted RBP6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 IDI1Q13907 227 aa6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 RBM26Q5T8P6 1007 aaKnown RBP6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 LARP6Q9BRS8 491 aaKnown RBP6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 TRAIPQ9BWF2 469 aa6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 FAM117AQ9C073 453 aa6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 TMEM2Q9UHN6 1383 aa6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 POLR1AO95602 1720 aaPredicted RBP6.89□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 TRPM2O94759 1503 aa6.88□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 SCAF11Q99590 1463 aaKnown RBP6.88□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 TRAK2O60296 914 aa6.88□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 ONECUT3O60422 494 aaPredicted RBP6.88□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 ANKLE2Q86XL3 938 aa6.88□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 SPHKAPQ2M3C7 1700 aa6.87□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 TMEM131LA2VDJ0 1609 aa6.87□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 PLEKHG3A1L390 1219 aa6.87□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 PSEN1P49768 467 aa6.87□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 ZNF579Q8NAF0 562 aaKnown RBP6.87□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 CRISPLD2Q9H0B8 497 aa6.87□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 CFAP65Q6ZU64 1925 aaKnown RBP6.87□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 NPHP4O75161 1426 aaPredicted RBP6.86□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 ZFYVE9O95405 1425 aa6.86□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 RAB3GAP2Q9H2M9 1393 aa6.86□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 DDX27Q96GQ7 796 aaKnown RBP6.86□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 LTBP4Q8N2S1 1624 aa6.86□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 IQSEC2Q5JU85 1478 aa6.85□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 MINK1Q8N4C8 1332 aaPredicted RBP6.85□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 IQGAP1P46940 1657 aa6.85□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 TRIM52Q96A61 297 aa6.85□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 EID1Q9Y6B2 187 aa6.85□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 CLTCL1P53675 1640 aa6.84□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 LTKP29376 864 aa6.84□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 MLLT3P42568 568 aaPredicted RBP6.84□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 TXNDC2Q86VQ3 553 aa6.84□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 CCDC82Q8N4S0 544 aa6.84□□□□□ -1.31
RNU6ATAC28P-201ENST00000459249 RIMS2Q9UQ26 1411 aa6.84□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 PLEKHG1Q9ULL1 1385 aa6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 CPS1P31327 1500 aa6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 HDGFP51858 240 aaKnown RBP6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 AMHR2Q16671 573 aa6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 AKT1S1Q96B36 256 aa6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 MPHOSPH9Q99550 1183 aa6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 PCDHB8Q9UN66 801 aa6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 PCDHB13Q9Y5F0 798 aa6.83□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 EFCAB3Q8N7B9 438 aa6.82□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 CERKQ8TCT0 537 aa6.82□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 DIP2AQ14689 1571 aa6.82□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 ZNF335Q9H4Z2 1342 aaPredicted RBP6.81□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 MYO5BQ9ULV0 1848 aa6.81□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 SPDYE16A6NNV3 312 aaPredicted RBP6.81□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 CCDC144AA2RUR9 1427 aa6.81□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 SETBP1Q9Y6X0 1596 aa6.81□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 PIK3R4Q99570 1358 aa6.81□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 NEXMIFQ5QGS0 1516 aa6.81□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 RPGRIP1LQ68CZ1 1315 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 NWD1Q149M9 1564 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 SPATA31E1Q6ZUB1 1445 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 ADAMTS13Q76LX8 1427 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 SERPINA10Q9UK55 444 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 PHF8Q9UPP1 1060 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 CLEC11AQ9Y240 323 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 KIF1BO60333 1816 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 ANKRD30BQ9BXX2 1392 aa6.8□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 NKTRP30414 1462 aaKnown RBP6.79□□□□□ -1.32
RNU6ATAC28P-201ENST00000459249 GPR37O15354 613 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms