RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 PLEKHH1Q9ULM0 1364 aa22.14■■□□□ 1.13
TMEM220-202ENST00000455996 SLC26A8Q96RN1 970 aa22.13■■□□□ 1.13
TMEM220-202ENST00000455996 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
TMEM220-202ENST00000455996 NINLQ9Y2I6 1382 aa22.11■■□□□ 1.13
TMEM220-202ENST00000455996 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
TMEM220-202ENST00000455996 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
TMEM220-202ENST00000455996 PTCH1Q13635 1447 aa22.1■■□□□ 1.13
TMEM220-202ENST00000455996 NPC1L1Q9UHC9 1359 aa22.1■■□□□ 1.13
TMEM220-202ENST00000455996 MINK1Q8N4C8 1332 aaPredicted RBP22.1■■□□□ 1.13
TMEM220-202ENST00000455996 KDM4FA0A1W2PPD8 638 aa22.1■■□□□ 1.13
TMEM220-202ENST00000455996 RALBP1Q15311 655 aa22.1■■□□□ 1.13
TMEM220-202ENST00000455996 PARD3Q8TEW0 1356 aa22.09■■□□□ 1.13
TMEM220-202ENST00000455996 ATAD2Q6PL18 1390 aa22.09■■□□□ 1.13
TMEM220-202ENST00000455996 XRN1Q8IZH2 1706 aaKnown RBP22.08■■□□□ 1.12
TMEM220-202ENST00000455996 CABP2Q9NPB3 220 aa22.06■■□□□ 1.12
TMEM220-202ENST00000455996 ADGRB2O60241 1585 aa22.06■■□□□ 1.12
TMEM220-202ENST00000455996 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
TMEM220-202ENST00000455996 AMER1Q5JTC6 1135 aaPredicted RBP22.06■■□□□ 1.12
TMEM220-202ENST00000455996 AMOTL2Q9Y2J4 779 aa22.06■■□□□ 1.12
TMEM220-202ENST00000455996 KNSTRNQ9Y448 316 aa22.06■■□□□ 1.12
TMEM220-202ENST00000455996 CDK19Q9BWU1 502 aa22.05■■□□□ 1.12
TMEM220-202ENST00000455996 CARD14Q9BXL6 1004 aa22.04■■□□□ 1.12
TMEM220-202ENST00000455996 SLC12A5Q9H2X9 1139 aa22.04■■□□□ 1.12
TMEM220-202ENST00000455996 SRPK2P78362 688 aaKnown RBP22.03■■□□□ 1.12
TMEM220-202ENST00000455996 ANKRD36BQ8N2N9 1353 aa22.03■■□□□ 1.12
TMEM220-202ENST00000455996 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
TMEM220-202ENST00000455996 WASLO00401 505 aaPredicted RBP22.02■■□□□ 1.12
TMEM220-202ENST00000455996 TMC1Q8TDI8 760 aa22■■□□□ 1.11
TMEM220-202ENST00000455996 SIPA1L2Q9P2F8 1722 aaPredicted RBP22■■□□□ 1.11
TMEM220-202ENST00000455996 USP32Q8NFA0 1604 aa21.99■■□□□ 1.11
TMEM220-202ENST00000455996 CCDC184Q52MB2 194 aa21.99■■□□□ 1.11
TMEM220-202ENST00000455996 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
TMEM220-202ENST00000455996 BRD4O60885 1362 aaPredicted RBP21.98■■□□□ 1.11
TMEM220-202ENST00000455996 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
TMEM220-202ENST00000455996 CD163L1Q9NR16 1453 aa21.97■■□□□ 1.11
TMEM220-202ENST00000455996 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
TMEM220-202ENST00000455996 KCNA6P17658 529 aa21.96■■□□□ 1.11
TMEM220-202ENST00000455996 CC2D1BQ5T0F9 858 aaKnown RBP21.96■■□□□ 1.11
TMEM220-202ENST00000455996 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
TMEM220-202ENST00000455996 MRS2Q9HD23 443 aa21.96■■□□□ 1.11
TMEM220-202ENST00000455996 ATP7BP35670 1465 aa21.95■■□□□ 1.1
TMEM220-202ENST00000455996 NLRP13Q86W25 1043 aa21.94■■□□□ 1.1
TMEM220-202ENST00000455996 A0A1W2PP64 1363 aa21.94■■□□□ 1.1
TMEM220-202ENST00000455996 TERF2IPQ9NYB0 399 aa21.93■■□□□ 1.1
TMEM220-202ENST00000455996 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
TMEM220-202ENST00000455996 NWD1Q149M9 1564 aa21.92■■□□□ 1.1
TMEM220-202ENST00000455996 CNGB1Q14028 1251 aaPredicted RBP21.91■■□□□ 1.1
TMEM220-202ENST00000455996 NUDT16Q96DE0 195 aaKnown RBP21.91■■□□□ 1.1
TMEM220-202ENST00000455996 NSD2O96028 1365 aa21.91■■□□□ 1.1
TMEM220-202ENST00000455996 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
TMEM220-202ENST00000455996 CABP1Q9NZU7 370 aa21.9■■□□□ 1.1
TMEM220-202ENST00000455996 CPSF1Q10570 1443 aaKnown RBP21.9■■□□□ 1.1
TMEM220-202ENST00000455996 CGNL1Q0VF96 1302 aa21.89■■□□□ 1.1
TMEM220-202ENST00000455996 CCDC61Q9Y6R9 512 aa21.89■■□□□ 1.1
TMEM220-202ENST00000455996 PRR36Q9H6K5 1346 aa21.89■■□□□ 1.09
TMEM220-202ENST00000455996 HDGFL2Q7Z4V5 671 aaPredicted RBP21.89■■□□□ 1.09
TMEM220-202ENST00000455996 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
TMEM220-202ENST00000455996 PPP2R1AP30153 589 aa21.87■■□□□ 1.09
TMEM220-202ENST00000455996 PNISRQ8TF01 805 aaKnown RBP21.87■■□□□ 1.09
TMEM220-202ENST00000455996 CDC42BPGQ6DT37 1551 aa21.87■■□□□ 1.09
TMEM220-202ENST00000455996 TOPAZ1Q8N9V7 1692 aa21.86■■□□□ 1.09
TMEM220-202ENST00000455996 ANKARQ7Z5J8 1434 aa21.85■■□□□ 1.09
TMEM220-202ENST00000455996 PLEKHG3A1L390 1219 aa21.84■■□□□ 1.09
TMEM220-202ENST00000455996 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.09
TMEM220-202ENST00000455996 HSPA2P54652 639 aa21.82■■□□□ 1.08
TMEM220-202ENST00000455996 ADGRL3Q9HAR2 1447 aa21.82■■□□□ 1.08
TMEM220-202ENST00000455996 EDC4Q6P2E9 1401 aaKnown RBP21.81■■□□□ 1.08
TMEM220-202ENST00000455996 ZNF692Q9BU19 519 aaPredicted RBP21.8■■□□□ 1.08
TMEM220-202ENST00000455996 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
TMEM220-202ENST00000455996 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
TMEM220-202ENST00000455996 INSRP06213 1382 aa21.8■■□□□ 1.08
TMEM220-202ENST00000455996 MORC1Q86VD1 984 aa21.79■■□□□ 1.08
TMEM220-202ENST00000455996 FAM9BQ8IZU0 186 aa21.79■■□□□ 1.08
TMEM220-202ENST00000455996 MON2Q7Z3U7 1717 aa21.78■■□□□ 1.08
TMEM220-202ENST00000455996 AKAP12Q02952 1782 aa21.78■■□□□ 1.08
TMEM220-202ENST00000455996 FYB1O15117 783 aa21.78■■□□□ 1.08
TMEM220-202ENST00000455996 STRCQ7RTU9 1775 aa21.77■■□□□ 1.08
TMEM220-202ENST00000455996 ITSN1Q15811 1721 aa21.76■■□□□ 1.07
TMEM220-202ENST00000455996 ANKRD26Q9UPS8 1709 aa21.76■■□□□ 1.07
TMEM220-202ENST00000455996 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
TMEM220-202ENST00000455996 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
TMEM220-202ENST00000455996 ACEP12821 1306 aa21.73■■□□□ 1.07
TMEM220-202ENST00000455996 KIF20BQ96Q89 1820 aa21.73■■□□□ 1.07
TMEM220-202ENST00000455996 SSH2Q76I76 1423 aa21.73■■□□□ 1.07
TMEM220-202ENST00000455996 PROSER2Q86WR7 435 aaPredicted RBP21.72■■□□□ 1.07
TMEM220-202ENST00000455996 NRKQ7Z2Y5 1582 aa21.71■■□□□ 1.07
TMEM220-202ENST00000455996 USP6P35125 1406 aa21.71■■□□□ 1.07
TMEM220-202ENST00000455996 HNRNPUQ00839 825 aaKnown RBP eCLIP21.71■■□□□ 1.07
TMEM220-202ENST00000455996 GGNBP2Q9H3C7 697 aa21.71■■□□□ 1.07
TMEM220-202ENST00000455996 STRCP1A6NGW2 1772 aa21.7■■□□□ 1.06
TMEM220-202ENST00000455996 NUTM2FA1L443 756 aa21.7■■□□□ 1.06
TMEM220-202ENST00000455996 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
TMEM220-202ENST00000455996 TTC21BQ7Z4L5 1316 aa21.67■■□□□ 1.06
TMEM220-202ENST00000455996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.67■■□□□ 1.06
TMEM220-202ENST00000455996 DCCP43146 1447 aa21.66■■□□□ 1.06
TMEM220-202ENST00000455996 BLMP54132 1417 aaPredicted RBP21.66■■□□□ 1.06
TMEM220-202ENST00000455996 RBM33Q96EV2 1170 aaKnown RBP21.66■■□□□ 1.06
TMEM220-202ENST00000455996 RGPD8O14715 1765 aaPredicted RBP21.66■■□□□ 1.06
TMEM220-202ENST00000455996 ZBED9Q6R2W3 1325 aa21.65■■□□□ 1.06
TMEM220-202ENST00000455996 POTEDQ86YR6 584 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms