RNA–Protein interactions for RNA: ENST00000455531.1

MEG3-213, Transcript of maternally expressed 3, humanhuman

TSL 2 BASIC

Gene MEG3, Length 4,867 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-213ENST00000455531 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
MEG3-213ENST00000455531 SYCE3A1L190 88 aa16.31■□□□□ 0.2
MEG3-213ENST00000455531 CDC45O75419 566 aa16.31■□□□□ 0.2
MEG3-213ENST00000455531 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
MEG3-213ENST00000455531 IGHDP01880 384 aa16.31■□□□□ 0.2
MEG3-213ENST00000455531 APPP05067 770 aa16.31■□□□□ 0.2
MEG3-213ENST00000455531 SMAP1Q8IYB5 467 aaPredicted RBP16.31■□□□□ 0.2
MEG3-213ENST00000455531 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
MEG3-213ENST00000455531 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
MEG3-213ENST00000455531 TPM3P06753 285 aa16.3■□□□□ 0.2
MEG3-213ENST00000455531 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
MEG3-213ENST00000455531 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
MEG3-213ENST00000455531 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
MEG3-213ENST00000455531 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
MEG3-213ENST00000455531 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
MEG3-213ENST00000455531 ERICH4A6NGS2 130 aa16.29■□□□□ 0.2
MEG3-213ENST00000455531 RABEP1Q15276 862 aa16.29■□□□□ 0.2
MEG3-213ENST00000455531 NAIPQ13075 1403 aa16.29■□□□□ 0.2
MEG3-213ENST00000455531 SSFA2P28290 1259 aa16.29■□□□□ 0.2
MEG3-213ENST00000455531 RUNDC1Q96C34 613 aa16.29■□□□□ 0.2
MEG3-213ENST00000455531 BECN2A8MW95 431 aa16.28■□□□□ 0.2
MEG3-213ENST00000455531 HMMRO75330 724 aa16.28■□□□□ 0.2
MEG3-213ENST00000455531 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
MEG3-213ENST00000455531 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
MEG3-213ENST00000455531 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
MEG3-213ENST00000455531 MCM5P33992 734 aa16.27■□□□□ 0.2
MEG3-213ENST00000455531 NCOA2Q15596 1464 aa16.27■□□□□ 0.2
MEG3-213ENST00000455531 RILPL2Q969X0 211 aa16.27■□□□□ 0.19
MEG3-213ENST00000455531 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.19
MEG3-213ENST00000455531 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
MEG3-213ENST00000455531 CCAR2Q8N163 923 aaKnown RBP16.26■□□□□ 0.19
MEG3-213ENST00000455531 SEC24BO95487 1268 aa16.26■□□□□ 0.19
MEG3-213ENST00000455531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
MEG3-213ENST00000455531 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
MEG3-213ENST00000455531 CCDC94Q9BW85 323 aaPredicted RBP16.26■□□□□ 0.19
MEG3-213ENST00000455531 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
MEG3-213ENST00000455531 AMPHP49418 695 aa16.25■□□□□ 0.19
MEG3-213ENST00000455531 TPM4P67936 248 aa16.25■□□□□ 0.19
MEG3-213ENST00000455531 CCDC112Q8NEF3 446 aa16.25■□□□□ 0.19
MEG3-213ENST00000455531 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
MEG3-213ENST00000455531 LETM1O95202 739 aaPredicted RBP16.25■□□□□ 0.19
MEG3-213ENST00000455531 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
MEG3-213ENST00000455531 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
MEG3-213ENST00000455531 ARGLU1Q9NWB6 273 aaPredicted RBP16.24■□□□□ 0.19
MEG3-213ENST00000455531 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
MEG3-213ENST00000455531 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
MEG3-213ENST00000455531 KLHL40Q2TBA0 621 aa16.24■□□□□ 0.19
MEG3-213ENST00000455531 HOMER1Q86YM7 354 aa16.24■□□□□ 0.19
MEG3-213ENST00000455531 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
MEG3-213ENST00000455531 AEBP1Q8IUX7 1158 aa16.23■□□□□ 0.19
MEG3-213ENST00000455531 MVPQ14764 893 aaKnown RBP16.23■□□□□ 0.19
MEG3-213ENST00000455531 NEK4P51957 841 aa16.23■□□□□ 0.19
MEG3-213ENST00000455531 GTPBP4Q9BZE4 634 aaKnown RBP16.23■□□□□ 0.19
MEG3-213ENST00000455531 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
MEG3-213ENST00000455531 EVA1CP58658 441 aa16.22■□□□□ 0.19
MEG3-213ENST00000455531 CCDC34Q96HJ3 373 aa16.22■□□□□ 0.19
MEG3-213ENST00000455531 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
MEG3-213ENST00000455531 TRIM5Q9C035 493 aa16.22■□□□□ 0.19
MEG3-213ENST00000455531 ZKSCAN5Q9Y2L8 839 aa16.22■□□□□ 0.19
MEG3-213ENST00000455531 CWC15Q9P013 229 aaKnown RBP16.22■□□□□ 0.19
MEG3-213ENST00000455531 NBPF1Q3BBV0 1214 aa16.21■□□□□ 0.19
MEG3-213ENST00000455531 SLC4A10Q6U841 1118 aa16.21■□□□□ 0.19
MEG3-213ENST00000455531 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
MEG3-213ENST00000455531 BAG4O95429 457 aaKnown RBP16.21■□□□□ 0.19
MEG3-213ENST00000455531 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.18
MEG3-213ENST00000455531 IGSF3O75054 1194 aa16.2■□□□□ 0.18
MEG3-213ENST00000455531 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
MEG3-213ENST00000455531 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
MEG3-213ENST00000455531 GPATCH3Q96I76 525 aa16.2■□□□□ 0.18
MEG3-213ENST00000455531 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
MEG3-213ENST00000455531 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
MEG3-213ENST00000455531 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
MEG3-213ENST00000455531 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
MEG3-213ENST00000455531 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
MEG3-213ENST00000455531 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
MEG3-213ENST00000455531 VPS37CA5D8V6 355 aaPredicted RBP16.19■□□□□ 0.18
MEG3-213ENST00000455531 ZSCAN23Q3MJ62 389 aa16.19■□□□□ 0.18
MEG3-213ENST00000455531 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
MEG3-213ENST00000455531 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
MEG3-213ENST00000455531 CHD1LQ86WJ1 897 aa16.18■□□□□ 0.18
MEG3-213ENST00000455531 PLCD3Q8N3E9 789 aa16.18■□□□□ 0.18
MEG3-213ENST00000455531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.18■□□□□ 0.18
MEG3-213ENST00000455531 CALCOCO1Q9P1Z2 691 aa16.17■□□□□ 0.18
MEG3-213ENST00000455531 HS1BP3Q53T59 392 aa16.17■□□□□ 0.18
MEG3-213ENST00000455531 RBM27Q9P2N5 1060 aaKnown RBP16.17■□□□□ 0.18
MEG3-213ENST00000455531 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
MEG3-213ENST00000455531 FIBPO43427 364 aa16.17■□□□□ 0.18
MEG3-213ENST00000455531 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
MEG3-213ENST00000455531 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
MEG3-213ENST00000455531 USP25Q9UHP3 1055 aa16.16■□□□□ 0.18
MEG3-213ENST00000455531 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
MEG3-213ENST00000455531 HSP90B1P14625 803 aaKnown RBP16.16■□□□□ 0.18
MEG3-213ENST00000455531 RIPK4P57078 832 aa16.16■□□□□ 0.18
MEG3-213ENST00000455531 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
MEG3-213ENST00000455531 CUL7Q14999 1698 aa16.16■□□□□ 0.18
MEG3-213ENST00000455531 TERF1P54274 439 aa16.15■□□□□ 0.18
MEG3-213ENST00000455531 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
MEG3-213ENST00000455531 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
MEG3-213ENST00000455531 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
MEG3-213ENST00000455531 ANKRD30BQ9BXX2 1392 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms