RNA–Protein interactions for RNA: ENST00000454250.7

CHRNA7-203, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CHRNA7, Length 2,093 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-203ENST00000454250 PTPRMP28827 1452 aa28.21■■■□□ 2.11
CHRNA7-203ENST00000454250 POGKQ9P215 609 aa28.2■■■□□ 2.11
CHRNA7-203ENST00000454250 CDCA7LQ96GN5 454 aa28.2■■■□□ 2.1
CHRNA7-203ENST00000454250 MORC1Q86VD1 984 aa28.17■■■□□ 2.1
CHRNA7-203ENST00000454250 MINK1Q8N4C8 1332 aaPredicted RBP28.17■■■□□ 2.1
CHRNA7-203ENST00000454250 SRPK2P78362 688 aaKnown RBP28.17■■■□□ 2.1
CHRNA7-203ENST00000454250 ANKRD36BQ8N2N9 1353 aa28.15■■■□□ 2.1
CHRNA7-203ENST00000454250 CGNL1Q0VF96 1302 aa28.14■■■□□ 2.1
CHRNA7-203ENST00000454250 TNNT2P45379 298 aaPredicted RBP28.12■■■□□ 2.09
CHRNA7-203ENST00000454250 RCAN3Q9UKA8 241 aa28.11■■■□□ 2.09
CHRNA7-203ENST00000454250 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.1■■■□□ 2.09
CHRNA7-203ENST00000454250 TNRQ92752 1358 aa28.1■■■□□ 2.09
CHRNA7-203ENST00000454250 B4GALNT3Q6L9W6 998 aa28.09■■■□□ 2.09
CHRNA7-203ENST00000454250 USP32Q8NFA0 1604 aa28.09■■■□□ 2.09
CHRNA7-203ENST00000454250 CCDC146Q8IYE0 955 aa28.08■■■□□ 2.09
CHRNA7-203ENST00000454250 POLR3AO14802 1390 aaPredicted RBP28.08■■■□□ 2.09
CHRNA7-203ENST00000454250 PLEKHH1Q9ULM0 1364 aa28.07■■■□□ 2.08
CHRNA7-203ENST00000454250 NINLQ9Y2I6 1382 aa28.07■■■□□ 2.08
CHRNA7-203ENST00000454250 ATAD2Q6PL18 1390 aa28.06■■■□□ 2.08
CHRNA7-203ENST00000454250 WAPLQ7Z5K2 1190 aa28.06■■■□□ 2.08
CHRNA7-203ENST00000454250 CDK19Q9BWU1 502 aa28.06■■■□□ 2.08
CHRNA7-203ENST00000454250 A0A1W2PP64 1363 aa28.04■■■□□ 2.08
CHRNA7-203ENST00000454250 RRP1P56182 461 aaKnown RBP28.04■■■□□ 2.08
CHRNA7-203ENST00000454250 SETD1AO15047 1707 aaKnown RBP28.04■■■□□ 2.08
CHRNA7-203ENST00000454250 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
CHRNA7-203ENST00000454250 NSD2O96028 1365 aa28.02■■■□□ 2.08
CHRNA7-203ENST00000454250 ABCC11Q96J66 1382 aa28.02■■■□□ 2.08
CHRNA7-203ENST00000454250 ZNF521Q96K83 1311 aa28.01■■■□□ 2.08
CHRNA7-203ENST00000454250 DLC1Q96QB1 1528 aa28.01■■■□□ 2.08
CHRNA7-203ENST00000454250 APAF1O14727 1248 aa28.01■■■□□ 2.07
CHRNA7-203ENST00000454250 TERF2IPQ9NYB0 399 aa28.01■■■□□ 2.07
CHRNA7-203ENST00000454250 NRXN3Q9Y4C0 1643 aa28■■■□□ 2.07
CHRNA7-203ENST00000454250 MTHFSP49914 203 aa28■■■□□ 2.07
CHRNA7-203ENST00000454250 METP08581 1390 aa27.99■■■□□ 2.07
CHRNA7-203ENST00000454250 CEBPAP49715 358 aaPredicted RBP27.98■■■□□ 2.07
CHRNA7-203ENST00000454250 GOLGA2Q08379 1002 aa27.97■■■□□ 2.07
CHRNA7-203ENST00000454250 TMEM2Q9UHN6 1383 aa27.96■■■□□ 2.07
CHRNA7-203ENST00000454250 CABP1Q9NZU7 370 aa27.96■■■□□ 2.07
CHRNA7-203ENST00000454250 CD163L1Q9NR16 1453 aa27.96■■■□□ 2.07
CHRNA7-203ENST00000454250 TRHP20396 242 aaPredicted RBP27.96■■■□□ 2.07
CHRNA7-203ENST00000454250 UBR1Q8IWV7 1749 aa27.94■■■□□ 2.06
CHRNA7-203ENST00000454250 DUSP27Q5VZP5 1158 aa27.94■■■□□ 2.06
CHRNA7-203ENST00000454250 TXNDC2Q86VQ3 553 aa27.94■■■□□ 2.06
CHRNA7-203ENST00000454250 GGNBP2Q9H3C7 697 aa27.94■■■□□ 2.06
CHRNA7-203ENST00000454250 HDGFL2Q7Z4V5 671 aaPredicted RBP27.93■■■□□ 2.06
CHRNA7-203ENST00000454250 CFAP53Q96M91 514 aa27.93■■■□□ 2.06
CHRNA7-203ENST00000454250 SHPRHQ149N8 1683 aa27.92■■■□□ 2.06
CHRNA7-203ENST00000454250 FYB1O15117 783 aa27.91■■■□□ 2.06
CHRNA7-203ENST00000454250 CCDC136Q96JN2 1154 aa27.91■■■□□ 2.06
CHRNA7-203ENST00000454250 SLFN5Q08AF3 891 aa27.9■■■□□ 2.06
CHRNA7-203ENST00000454250 RBM19Q9Y4C8 960 aaKnown RBP27.88■■■□□ 2.05
CHRNA7-203ENST00000454250 PLPPR3Q6T4P5 718 aa27.88■■■□□ 2.05
CHRNA7-203ENST00000454250 NGEFQ8N5V2 710 aa27.88■■■□□ 2.05
CHRNA7-203ENST00000454250 EXOC6Q8TAG9 804 aa27.87■■■□□ 2.05
CHRNA7-203ENST00000454250 WASLO00401 505 aaPredicted RBP27.87■■■□□ 2.05
CHRNA7-203ENST00000454250 PLIN1O60240 522 aa27.87■■■□□ 2.05
CHRNA7-203ENST00000454250 NLRP1Q9C000 1473 aa27.86■■■□□ 2.05
CHRNA7-203ENST00000454250 LTKP29376 864 aa27.86■■■□□ 2.05
CHRNA7-203ENST00000454250 SIRT1Q96EB6 747 aa27.86■■■□□ 2.05
CHRNA7-203ENST00000454250 TRMT2AQ8IZ69 625 aaKnown RBP27.85■■■□□ 2.05
CHRNA7-203ENST00000454250 RUNDC1Q96C34 613 aa27.85■■■□□ 2.05
CHRNA7-203ENST00000454250 SPINK5Q9NQ38 1064 aaPredicted RBP27.85■■■□□ 2.05
CHRNA7-203ENST00000454250 FAM135BQ49AJ0 1406 aa27.83■■■□□ 2.05
CHRNA7-203ENST00000454250 TECPR2O15040 1411 aa27.82■■■□□ 2.04
CHRNA7-203ENST00000454250 MED14O60244 1454 aa27.82■■■□□ 2.04
CHRNA7-203ENST00000454250 ADAMTS13Q76LX8 1427 aa27.81■■■□□ 2.04
CHRNA7-203ENST00000454250 C3P01024 1663 aa27.81■■■□□ 2.04
CHRNA7-203ENST00000454250 DMRT2Q9Y5R5 561 aa27.81■■■□□ 2.04
CHRNA7-203ENST00000454250 KNDC1Q76NI1 1749 aa27.8■■■□□ 2.04
CHRNA7-203ENST00000454250 E9PSI1 815 aa27.8■■■□□ 2.04
CHRNA7-203ENST00000454250 WWC1Q8IX03 1113 aa27.8■■■□□ 2.04
CHRNA7-203ENST00000454250 ATP7BP35670 1465 aa27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 PLEKHG1Q9ULL1 1385 aa27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 TCP11L2Q8N4U5 519 aa27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 U2AF1L5P0DN76 240 aaPredicted RBP27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 U2AF1Q01081 240 aaKnown RBP eCLIP27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 NEUROD2Q15784 382 aa27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 ANKRD26Q9UPS8 1709 aa27.79■■■□□ 2.04
CHRNA7-203ENST00000454250 RRP7AQ9Y3A4 280 aaKnown RBP27.78■■■□□ 2.04
CHRNA7-203ENST00000454250 NUDT16Q96DE0 195 aaKnown RBP27.77■■■□□ 2.04
CHRNA7-203ENST00000454250 EID1Q9Y6B2 187 aa27.77■■■□□ 2.04
CHRNA7-203ENST00000454250 CPS1P31327 1500 aa27.77■■■□□ 2.04
CHRNA7-203ENST00000454250 ROBO2Q9HCK4 1378 aa27.76■■■□□ 2.04
CHRNA7-203ENST00000454250 PPIP5K1Q6PFW1 1433 aa27.76■■■□□ 2.04
CHRNA7-203ENST00000454250 FER1L4A9Z1Z3 1794 aa27.76■■■□□ 2.03
CHRNA7-203ENST00000454250 SLC26A8Q96RN1 970 aa27.74■■■□□ 2.03
CHRNA7-203ENST00000454250 NCKAP5LQ9HCH0 1330 aa27.74■■■□□ 2.03
CHRNA7-203ENST00000454250 KIF20BQ96Q89 1820 aa27.73■■■□□ 2.03
CHRNA7-203ENST00000454250 NKTRP30414 1462 aaKnown RBP27.73■■■□□ 2.03
CHRNA7-203ENST00000454250 IQSEC2Q5JU85 1478 aa27.73■■■□□ 2.03
CHRNA7-203ENST00000454250 CCDC61Q9Y6R9 512 aa27.73■■■□□ 2.03
CHRNA7-203ENST00000454250 CPSF1Q10570 1443 aaKnown RBP27.73■■■□□ 2.03
CHRNA7-203ENST00000454250 CRBNQ96SW2 442 aa27.72■■■□□ 2.03
CHRNA7-203ENST00000454250 U2SURPO15042 1029 aaKnown RBP27.71■■■□□ 2.03
CHRNA7-203ENST00000454250 C20orf194Q5TEA3 1177 aa27.71■■■□□ 2.03
CHRNA7-203ENST00000454250 PHF23Q9BUL5 403 aaPredicted RBP27.71■■■□□ 2.03
CHRNA7-203ENST00000454250 COL3A1P02461 1466 aaPredicted RBP27.7■■■□□ 2.02
CHRNA7-203ENST00000454250 THEMISQ8N1K5 641 aaPredicted RBP27.69■■■□□ 2.02
CHRNA7-203ENST00000454250 SLIT1O75093 1534 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms