RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 MED14O60244 1454 aa29.05■■■□□ 2.24
CTU2-202ENST00000453996 DIP2AQ14689 1571 aa29.05■■■□□ 2.24
CTU2-202ENST00000453996 MINK1Q8N4C8 1332 aaPredicted RBP29.04■■■□□ 2.24
CTU2-202ENST00000453996 CC2D1BQ5T0F9 858 aaKnown RBP29.03■■■□□ 2.24
CTU2-202ENST00000453996 FAM135BQ49AJ0 1406 aa29.02■■■□□ 2.24
CTU2-202ENST00000453996 BRD4O60885 1362 aaPredicted RBP29.02■■■□□ 2.24
CTU2-202ENST00000453996 NPC1L1Q9UHC9 1359 aa29.01■■■□□ 2.24
CTU2-202ENST00000453996 AMER1Q5JTC6 1135 aaPredicted RBP29.01■■■□□ 2.23
CTU2-202ENST00000453996 TMC1Q8TDI8 760 aa29.01■■■□□ 2.23
CTU2-202ENST00000453996 PLEKHH1Q9ULM0 1364 aa28.99■■■□□ 2.23
CTU2-202ENST00000453996 SIRT1Q96EB6 747 aa28.99■■■□□ 2.23
CTU2-202ENST00000453996 CABP2Q9NPB3 220 aa28.99■■■□□ 2.23
CTU2-202ENST00000453996 NINLQ9Y2I6 1382 aa28.99■■■□□ 2.23
CTU2-202ENST00000453996 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
CTU2-202ENST00000453996 WAPLQ7Z5K2 1190 aa28.98■■■□□ 2.23
CTU2-202ENST00000453996 ATAD2Q6PL18 1390 aa28.97■■■□□ 2.23
CTU2-202ENST00000453996 NLRP13Q86W25 1043 aa28.97■■■□□ 2.23
CTU2-202ENST00000453996 USP32Q8NFA0 1604 aa28.96■■■□□ 2.23
CTU2-202ENST00000453996 SLC12A5Q9H2X9 1139 aa28.96■■■□□ 2.23
CTU2-202ENST00000453996 FAM9BQ8IZU0 186 aa28.96■■■□□ 2.23
CTU2-202ENST00000453996 CARD14Q9BXL6 1004 aa28.96■■■□□ 2.23
CTU2-202ENST00000453996 SLC26A8Q96RN1 970 aa28.94■■■□□ 2.22
CTU2-202ENST00000453996 ANKRD36BQ8N2N9 1353 aa28.93■■■□□ 2.22
CTU2-202ENST00000453996 TBX22Q9Y458 520 aa28.93■■■□□ 2.22
CTU2-202ENST00000453996 NSD3Q9BZ95 1437 aa28.93■■■□□ 2.22
CTU2-202ENST00000453996 CDK19Q9BWU1 502 aa28.92■■■□□ 2.22
CTU2-202ENST00000453996 PTPRUQ92729 1446 aa28.9■■■□□ 2.22
CTU2-202ENST00000453996 ROBO2Q9HCK4 1378 aa28.9■■■□□ 2.22
CTU2-202ENST00000453996 HNRNPUQ00839 825 aaKnown RBP eCLIP28.89■■■□□ 2.22
CTU2-202ENST00000453996 ADGRB2O60241 1585 aa28.88■■■□□ 2.21
CTU2-202ENST00000453996 ANKLE2Q86XL3 938 aa28.87■■■□□ 2.21
CTU2-202ENST00000453996 PNISRQ8TF01 805 aaKnown RBP28.87■■■□□ 2.21
CTU2-202ENST00000453996 XRN1Q8IZH2 1706 aaKnown RBP28.87■■■□□ 2.21
CTU2-202ENST00000453996 PTCH1Q13635 1447 aa28.85■■■□□ 2.21
CTU2-202ENST00000453996 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.84■■■□□ 2.21
CTU2-202ENST00000453996 WASLO00401 505 aaPredicted RBP28.83■■■□□ 2.21
CTU2-202ENST00000453996 A0A1W2PP64 1363 aa28.83■■■□□ 2.21
CTU2-202ENST00000453996 PIK3R4Q99570 1358 aa28.83■■■□□ 2.21
CTU2-202ENST00000453996 PPP2R1AP30153 589 aa28.82■■■□□ 2.2
CTU2-202ENST00000453996 AMOTL2Q9Y2J4 779 aa28.82■■■□□ 2.2
CTU2-202ENST00000453996 TERF2IPQ9NYB0 399 aa28.81■■■□□ 2.2
CTU2-202ENST00000453996 CD163L1Q9NR16 1453 aa28.81■■■□□ 2.2
CTU2-202ENST00000453996 CGNL1Q0VF96 1302 aa28.81■■■□□ 2.2
CTU2-202ENST00000453996 ATP7BP35670 1465 aa28.79■■■□□ 2.2
CTU2-202ENST00000453996 NSD2O96028 1365 aa28.78■■■□□ 2.2
CTU2-202ENST00000453996 CHD2O14647 1828 aaKnown RBP28.76■■■□□ 2.19
CTU2-202ENST00000453996 HDGFL2Q7Z4V5 671 aaPredicted RBP28.75■■■□□ 2.19
CTU2-202ENST00000453996 CABP1Q9NZU7 370 aa28.75■■■□□ 2.19
CTU2-202ENST00000453996 ANKRD26Q9UPS8 1709 aa28.74■■■□□ 2.19
CTU2-202ENST00000453996 NPHP4O75161 1426 aaPredicted RBP28.73■■■□□ 2.19
CTU2-202ENST00000453996 PPIP5K1Q6PFW1 1433 aa28.73■■■□□ 2.19
CTU2-202ENST00000453996 KIF20BQ96Q89 1820 aa28.72■■■□□ 2.19
CTU2-202ENST00000453996 ZBED9Q6R2W3 1325 aa28.71■■■□□ 2.19
CTU2-202ENST00000453996 TOPAZ1Q8N9V7 1692 aa28.71■■■□□ 2.19
CTU2-202ENST00000453996 MORC1Q86VD1 984 aa28.71■■■□□ 2.19
CTU2-202ENST00000453996 NUDT16Q96DE0 195 aaKnown RBP28.7■■■□□ 2.19
CTU2-202ENST00000453996 CDC42BPGQ6DT37 1551 aa28.7■■■□□ 2.19
CTU2-202ENST00000453996 ITSN1Q15811 1721 aa28.7■■■□□ 2.18
CTU2-202ENST00000453996 SCAF1Q9H7N4 1312 aaKnown RBP28.69■■■□□ 2.18
CTU2-202ENST00000453996 AKAP12Q02952 1782 aa28.68■■■□□ 2.18
CTU2-202ENST00000453996 INSRP06213 1382 aa28.67■■■□□ 2.18
CTU2-202ENST00000453996 KCNA6P17658 529 aa28.67■■■□□ 2.18
CTU2-202ENST00000453996 GTF3C3Q9Y5Q9 886 aa28.67■■■□□ 2.18
CTU2-202ENST00000453996 CCDC61Q9Y6R9 512 aa28.67■■■□□ 2.18
CTU2-202ENST00000453996 MON2Q7Z3U7 1717 aa28.66■■■□□ 2.18
CTU2-202ENST00000453996 CPSF1Q10570 1443 aaKnown RBP28.66■■■□□ 2.18
CTU2-202ENST00000453996 PRR36Q9H6K5 1346 aa28.64■■■□□ 2.18
CTU2-202ENST00000453996 BLMP54132 1417 aaPredicted RBP28.62■■■□□ 2.17
CTU2-202ENST00000453996 EDC4Q6P2E9 1401 aaKnown RBP28.61■■■□□ 2.17
CTU2-202ENST00000453996 NCKAP5LQ9HCH0 1330 aa28.61■■■□□ 2.17
CTU2-202ENST00000453996 WDR43Q15061 677 aaKnown RBP eCLIP28.59■■■□□ 2.17
CTU2-202ENST00000453996 POLR3AO14802 1390 aaPredicted RBP28.59■■■□□ 2.17
CTU2-202ENST00000453996 NALCNQ8IZF0 1738 aa28.59■■■□□ 2.17
CTU2-202ENST00000453996 FYB1O15117 783 aa28.58■■■□□ 2.17
CTU2-202ENST00000453996 TNNT2P45379 298 aaPredicted RBP28.58■■■□□ 2.17
CTU2-202ENST00000453996 NWD1Q149M9 1564 aa28.58■■■□□ 2.17
CTU2-202ENST00000453996 GGNBP2Q9H3C7 697 aa28.57■■■□□ 2.16
CTU2-202ENST00000453996 FMN2Q9NZ56 1722 aa28.57■■■□□ 2.16
CTU2-202ENST00000453996 KDM4FA0A1W2PPD8 638 aa28.55■■■□□ 2.16
CTU2-202ENST00000453996 NRKQ7Z2Y5 1582 aa28.54■■■□□ 2.16
CTU2-202ENST00000453996 RGPD8O14715 1765 aaPredicted RBP28.54■■■□□ 2.16
CTU2-202ENST00000453996 NKTRP30414 1462 aaKnown RBP28.54■■■□□ 2.16
CTU2-202ENST00000453996 ZNF692Q9BU19 519 aaPredicted RBP28.53■■■□□ 2.16
CTU2-202ENST00000453996 SHPRHQ149N8 1683 aa28.53■■■□□ 2.16
CTU2-202ENST00000453996 ANKARQ7Z5J8 1434 aa28.53■■■□□ 2.16
CTU2-202ENST00000453996 PLEKHG3A1L390 1219 aa28.52■■■□□ 2.16
CTU2-202ENST00000453996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.52■■■□□ 2.16
CTU2-202ENST00000453996 ADAMTS8Q9UP79 889 aa28.52■■■□□ 2.16
CTU2-202ENST00000453996 NUTM2FA1L443 756 aa28.52■■■□□ 2.16
CTU2-202ENST00000453996 MTHFSP49914 203 aa28.49■■■□□ 2.15
CTU2-202ENST00000453996 CFAP53Q96M91 514 aa28.48■■■□□ 2.15
CTU2-202ENST00000453996 ACEP12821 1306 aa28.48■■■□□ 2.15
CTU2-202ENST00000453996 ADGRL3Q9HAR2 1447 aa28.47■■■□□ 2.15
CTU2-202ENST00000453996 USP6P35125 1406 aa28.45■■■□□ 2.15
CTU2-202ENST00000453996 SENP3-EIF4A1A0A087X0R7 540 aa28.45■■■□□ 2.14
CTU2-202ENST00000453996 LMTK3Q96Q04 1460 aa28.44■■■□□ 2.14
CTU2-202ENST00000453996 NME9Q86XW9 330 aa28.42■■■□□ 2.14
CTU2-202ENST00000453996 SMG6Q86US8 1419 aaKnown RBP28.41■■■□□ 2.14
CTU2-202ENST00000453996 HSPA2P54652 639 aa28.39■■■□□ 2.14
CTU2-202ENST00000453996 TTC21BQ7Z4L5 1316 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms