RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.19□□□□□ -0.94
SBDSP1-204ENST00000453858 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
SBDSP1-204ENST00000453858 ZFP91Q96JP5 570 aaPredicted RBP9.19□□□□□ -0.94
SBDSP1-204ENST00000453858 SETD5Q9C0A6 1442 aa9.19□□□□□ -0.94
SBDSP1-204ENST00000453858 SLIT1O75093 1534 aa9.19□□□□□ -0.94
SBDSP1-204ENST00000453858 HNRNPMP52272 730 aaKnown RBP eCLIP9.18□□□□□ -0.94
SBDSP1-204ENST00000453858 TROQ12816 1431 aaPredicted RBP9.18□□□□□ -0.94
SBDSP1-204ENST00000453858 MAMSTRQ6ZN01 415 aa9.18□□□□□ -0.94
SBDSP1-204ENST00000453858 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
SBDSP1-204ENST00000453858 TRPC6Q9Y210 931 aa9.18□□□□□ -0.94
SBDSP1-204ENST00000453858 RTEL1-TNFRSF6BF6WH68 1400 aa9.17□□□□□ -0.94
SBDSP1-204ENST00000453858 BRINP3Q76B58 766 aa9.17□□□□□ -0.94
SBDSP1-204ENST00000453858 SPRYD3Q8NCJ5 442 aa9.17□□□□□ -0.94
SBDSP1-204ENST00000453858 BCL11BQ9C0K0 894 aaPredicted RBP9.17□□□□□ -0.94
SBDSP1-204ENST00000453858 USP21Q9UK80 565 aa9.17□□□□□ -0.94
SBDSP1-204ENST00000453858 PCDHB8Q9UN66 801 aa9.17□□□□□ -0.94
SBDSP1-204ENST00000453858 TET3O43151 1660 aa9.16□□□□□ -0.94
SBDSP1-204ENST00000453858 PSEN1P49768 467 aa9.16□□□□□ -0.94
SBDSP1-204ENST00000453858 IFNL1Q8IU54 200 aa9.16□□□□□ -0.94
SBDSP1-204ENST00000453858 CDK11AQ9UQ88 783 aaPredicted RBP9.16□□□□□ -0.94
SBDSP1-204ENST00000453858 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
SBDSP1-204ENST00000453858 WASHC2CQ9Y4E1 1318 aa9.15□□□□□ -0.94
SBDSP1-204ENST00000453858 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
SBDSP1-204ENST00000453858 POTEJP0CG39 1038 aa9.15□□□□□ -0.94
SBDSP1-204ENST00000453858 R3HDM1Q15032 1099 aaKnown RBP9.15□□□□□ -0.94
SBDSP1-204ENST00000453858 SLC26A8Q96RN1 970 aa9.15□□□□□ -0.94
SBDSP1-204ENST00000453858 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.95
SBDSP1-204ENST00000453858 DHX29Q7Z478 1369 aaKnown RBP9.14□□□□□ -0.95
SBDSP1-204ENST00000453858 LRRC59Q96AG4 307 aaKnown RBP9.14□□□□□ -0.95
SBDSP1-204ENST00000453858 INO80Q9ULG1 1556 aaPredicted RBP9.14□□□□□ -0.95
SBDSP1-204ENST00000453858 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
SBDSP1-204ENST00000453858 UBR1Q8IWV7 1749 aa9.14□□□□□ -0.95
SBDSP1-204ENST00000453858 KDM5AP29375 1690 aaKnown RBP9.13□□□□□ -0.95
SBDSP1-204ENST00000453858 POTEFA5A3E0 1075 aa9.13□□□□□ -0.95
SBDSP1-204ENST00000453858 ADAMTS2O95450 1211 aa9.13□□□□□ -0.95
SBDSP1-204ENST00000453858 IER5LQ5T953 404 aa9.13□□□□□ -0.95
SBDSP1-204ENST00000453858 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
SBDSP1-204ENST00000453858 PREX2Q70Z35 1606 aa9.13□□□□□ -0.95
SBDSP1-204ENST00000453858 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
SBDSP1-204ENST00000453858 GJD4Q96KN9 370 aaPredicted RBP9.12□□□□□ -0.95
SBDSP1-204ENST00000453858 EID1Q9Y6B2 187 aa9.12□□□□□ -0.95
SBDSP1-204ENST00000453858 KIAA1107Q9UPP5 1409 aa9.12□□□□□ -0.95
SBDSP1-204ENST00000453858 NCOA3Q9Y6Q9 1424 aa9.12□□□□□ -0.95
SBDSP1-204ENST00000453858 KIF3BO15066 747 aa9.11□□□□□ -0.95
SBDSP1-204ENST00000453858 CADPS2Q86UW7 1296 aa9.11□□□□□ -0.95
SBDSP1-204ENST00000453858 C19orf44Q9H6X5 657 aa9.11□□□□□ -0.95
SBDSP1-204ENST00000453858 TMEM2Q9UHN6 1383 aa9.11□□□□□ -0.95
SBDSP1-204ENST00000453858 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
SBDSP1-204ENST00000453858 CFAP44Q96MT7 982 aa9.1□□□□□ -0.95
SBDSP1-204ENST00000453858 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
SBDSP1-204ENST00000453858 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
SBDSP1-204ENST00000453858 SYCP2Q9BX26 1530 aa9.09□□□□□ -0.95
SBDSP1-204ENST00000453858 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
SBDSP1-204ENST00000453858 UNC13BO14795 1591 aa9.08□□□□□ -0.96
SBDSP1-204ENST00000453858 SCUBE2Q9NQ36 999 aa9.08□□□□□ -0.96
SBDSP1-204ENST00000453858 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
SBDSP1-204ENST00000453858 MROH1Q8NDA8 1641 aa9.08□□□□□ -0.96
SBDSP1-204ENST00000453858 NINLQ9Y2I6 1382 aa9.08□□□□□ -0.96
SBDSP1-204ENST00000453858 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
SBDSP1-204ENST00000453858 EN1Q05925 392 aaPredicted RBP9.07□□□□□ -0.96
SBDSP1-204ENST00000453858 ZNF777Q9ULD5 760 aaPredicted RBP9.07□□□□□ -0.96
SBDSP1-204ENST00000453858 CLIP1P30622 1438 aa9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 ONECUT3O60422 494 aaPredicted RBP9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 ATF3P18847 181 aa9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 NKX1-1Q15270 411 aaPredicted RBP9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 DDX17Q92841 729 aaKnown RBP9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 CAMSAP2Q08AD1 1489 aa9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
SBDSP1-204ENST00000453858 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.05□□□□□ -0.96
SBDSP1-204ENST00000453858 RALGAPBQ86X10 1494 aa9.05□□□□□ -0.96
SBDSP1-204ENST00000453858 SOX12O15370 315 aa9.05□□□□□ -0.96
SBDSP1-204ENST00000453858 BAG6P46379 1132 aa9.05□□□□□ -0.96
SBDSP1-204ENST00000453858 PRELPP51888 382 aa9.05□□□□□ -0.96
SBDSP1-204ENST00000453858 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
SBDSP1-204ENST00000453858 CDC42BPAQ5VT25 1732 aa9.05□□□□□ -0.96
SBDSP1-204ENST00000453858 BRWD3Q6RI45 1802 aa9.04□□□□□ -0.96
SBDSP1-204ENST00000453858 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
SBDSP1-204ENST00000453858 SEC24BO95487 1268 aa9.04□□□□□ -0.96
SBDSP1-204ENST00000453858 ASXL1Q8IXJ9 1541 aa9.04□□□□□ -0.96
SBDSP1-204ENST00000453858 GPATCH8Q9UKJ3 1502 aaKnown RBP9.04□□□□□ -0.96
SBDSP1-204ENST00000453858 PTCH1Q13635 1447 aa9.04□□□□□ -0.96
SBDSP1-204ENST00000453858 GIGYF1O75420 1035 aaPredicted RBP9.03□□□□□ -0.96
SBDSP1-204ENST00000453858 GOLGA2Q08379 1002 aa9.03□□□□□ -0.96
SBDSP1-204ENST00000453858 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
SBDSP1-204ENST00000453858 TMEM106CQ9BVX2 250 aa9.03□□□□□ -0.96
SBDSP1-204ENST00000453858 ATP1B4Q9UN42 357 aaPredicted RBP9.03□□□□□ -0.96
SBDSP1-204ENST00000453858 CHD2O14647 1828 aaKnown RBP9.03□□□□□ -0.96
SBDSP1-204ENST00000453858 SEPT12Q8IYM1 358 aa9.02□□□□□ -0.97
SBDSP1-204ENST00000453858 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
SBDSP1-204ENST00000453858 GLI3P10071 1580 aa9.02□□□□□ -0.97
SBDSP1-204ENST00000453858 SPHKAPQ2M3C7 1700 aa9.02□□□□□ -0.97
SBDSP1-204ENST00000453858 COL13A1Q5TAT6 717 aaPredicted RBP9.01□□□□□ -0.97
SBDSP1-204ENST00000453858 MBD5Q9P267 1494 aa9.01□□□□□ -0.97
SBDSP1-204ENST00000453858 DISP2A7MBM2 1401 aa9□□□□□ -0.97
SBDSP1-204ENST00000453858 NLRP6P59044 892 aa9□□□□□ -0.97
SBDSP1-204ENST00000453858 CAMKK2Q96RR4 588 aa9□□□□□ -0.97
SBDSP1-204ENST00000453858 POTEMA6NI47 508 aa8.99□□□□□ -0.97
SBDSP1-204ENST00000453858 KCNQ2O43526 872 aa8.99□□□□□ -0.97
SBDSP1-204ENST00000453858 EZH2Q15910 746 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms