RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
CTSB-204ENST00000453527 NINLQ9Y2I6 1382 aa23.77■■□□□ 1.4
CTSB-204ENST00000453527 C3P01024 1663 aa23.76■■□□□ 1.39
CTSB-204ENST00000453527 MINK1Q8N4C8 1332 aaPredicted RBP23.76■■□□□ 1.39
CTSB-204ENST00000453527 NLRP1Q9C000 1473 aa23.76■■□□□ 1.39
CTSB-204ENST00000453527 TMEM2Q9UHN6 1383 aa23.76■■□□□ 1.39
CTSB-204ENST00000453527 ABCC11Q96J66 1382 aa23.76■■□□□ 1.39
CTSB-204ENST00000453527 SRPK2P78362 688 aaKnown RBP23.76■■□□□ 1.39
CTSB-204ENST00000453527 ADAMTS8Q9UP79 889 aa23.76■■□□□ 1.39
CTSB-204ENST00000453527 FER1L4A9Z1Z3 1794 aa23.75■■□□□ 1.39
CTSB-204ENST00000453527 BCANQ96GW7 911 aa23.75■■□□□ 1.39
CTSB-204ENST00000453527 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
CTSB-204ENST00000453527 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
CTSB-204ENST00000453527 WDR43Q15061 677 aaKnown RBP eCLIP23.73■■□□□ 1.39
CTSB-204ENST00000453527 CGNL1Q0VF96 1302 aa23.73■■□□□ 1.39
CTSB-204ENST00000453527 METP08581 1390 aa23.72■■□□□ 1.39
CTSB-204ENST00000453527 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
CTSB-204ENST00000453527 MORC1Q86VD1 984 aa23.7■■□□□ 1.38
CTSB-204ENST00000453527 CDK19Q9BWU1 502 aa23.69■■□□□ 1.38
CTSB-204ENST00000453527 ERICH6BQ5W0A0 696 aa23.69■■□□□ 1.38
CTSB-204ENST00000453527 WAPLQ7Z5K2 1190 aa23.69■■□□□ 1.38
CTSB-204ENST00000453527 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
CTSB-204ENST00000453527 NSD2O96028 1365 aa23.68■■□□□ 1.38
CTSB-204ENST00000453527 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
CTSB-204ENST00000453527 A0A1W2PP64 1363 aa23.67■■□□□ 1.38
CTSB-204ENST00000453527 PLEKHH1Q9ULM0 1364 aa23.67■■□□□ 1.38
CTSB-204ENST00000453527 IRX6P78412 446 aaPredicted RBP23.67■■□□□ 1.38
CTSB-204ENST00000453527 POLR3AO14802 1390 aaPredicted RBP23.66■■□□□ 1.38
CTSB-204ENST00000453527 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
CTSB-204ENST00000453527 SIRT1Q96EB6 747 aa23.66■■□□□ 1.38
CTSB-204ENST00000453527 TECPR2O15040 1411 aa23.65■■□□□ 1.38
CTSB-204ENST00000453527 TERF2IPQ9NYB0 399 aa23.65■■□□□ 1.38
CTSB-204ENST00000453527 CD163L1Q9NR16 1453 aa23.64■■□□□ 1.38
CTSB-204ENST00000453527 FAM135BQ49AJ0 1406 aa23.63■■□□□ 1.37
CTSB-204ENST00000453527 RNF123Q5XPI4 1314 aa23.63■■□□□ 1.37
CTSB-204ENST00000453527 PLEKHG1Q9ULL1 1385 aa23.63■■□□□ 1.37
CTSB-204ENST00000453527 ADAMTS13Q76LX8 1427 aa23.63■■□□□ 1.37
CTSB-204ENST00000453527 LTKP29376 864 aa23.62■■□□□ 1.37
CTSB-204ENST00000453527 CPS1P31327 1500 aa23.61■■□□□ 1.37
CTSB-204ENST00000453527 TXNDC2Q86VQ3 553 aa23.61■■□□□ 1.37
CTSB-204ENST00000453527 SLIT1O75093 1534 aa23.61■■□□□ 1.37
CTSB-204ENST00000453527 TNNT2P45379 298 aaPredicted RBP23.6■■□□□ 1.37
CTSB-204ENST00000453527 ARHGAP23Q9P227 1491 aa23.59■■□□□ 1.37
CTSB-204ENST00000453527 CABP1Q9NZU7 370 aa23.59■■□□□ 1.37
CTSB-204ENST00000453527 EID1Q9Y6B2 187 aa23.59■■□□□ 1.37
CTSB-204ENST00000453527 HDGFL2Q7Z4V5 671 aaPredicted RBP23.58■■□□□ 1.37
CTSB-204ENST00000453527 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
CTSB-204ENST00000453527 CDCA7LQ96GN5 454 aa23.57■■□□□ 1.36
CTSB-204ENST00000453527 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
CTSB-204ENST00000453527 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
CTSB-204ENST00000453527 WASLO00401 505 aaPredicted RBP23.57■■□□□ 1.36
CTSB-204ENST00000453527 MED14O60244 1454 aa23.57■■□□□ 1.36
CTSB-204ENST00000453527 ATP7BP35670 1465 aa23.56■■□□□ 1.36
CTSB-204ENST00000453527 MTHFSP49914 203 aa23.55■■□□□ 1.36
CTSB-204ENST00000453527 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
CTSB-204ENST00000453527 FYB1O15117 783 aa23.54■■□□□ 1.36
CTSB-204ENST00000453527 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
CTSB-204ENST00000453527 PPP4R2Q9NY27 417 aa23.53■■□□□ 1.36
CTSB-204ENST00000453527 ZNF521Q96K83 1311 aa23.53■■□□□ 1.36
CTSB-204ENST00000453527 CCDC146Q8IYE0 955 aa23.52■■□□□ 1.36
CTSB-204ENST00000453527 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
CTSB-204ENST00000453527 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
CTSB-204ENST00000453527 KIF20BQ96Q89 1820 aa23.52■■□□□ 1.36
CTSB-204ENST00000453527 GGNBP2Q9H3C7 697 aa23.51■■□□□ 1.35
CTSB-204ENST00000453527 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
CTSB-204ENST00000453527 RIMS1Q86UR5 1692 aaKnown RBP23.5■■□□□ 1.35
CTSB-204ENST00000453527 APAF1O14727 1248 aa23.49■■□□□ 1.35
CTSB-204ENST00000453527 NGEFQ8N5V2 710 aa23.49■■□□□ 1.35
CTSB-204ENST00000453527 SLC26A8Q96RN1 970 aa23.49■■□□□ 1.35
CTSB-204ENST00000453527 PPIP5K1Q6PFW1 1433 aa23.48■■□□□ 1.35
CTSB-204ENST00000453527 TBX22Q9Y458 520 aa23.48■■□□□ 1.35
CTSB-204ENST00000453527 CPSF1Q10570 1443 aaKnown RBP23.47■■□□□ 1.35
CTSB-204ENST00000453527 NUDT16Q96DE0 195 aaKnown RBP23.47■■□□□ 1.35
CTSB-204ENST00000453527 ADGRB2O60241 1585 aa23.47■■□□□ 1.35
CTSB-204ENST00000453527 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.46■■□□□ 1.35
CTSB-204ENST00000453527 CEP170BQ9Y4F5 1589 aaPredicted RBP23.46■■□□□ 1.35
CTSB-204ENST00000453527 CCDC61Q9Y6R9 512 aa23.46■■□□□ 1.35
CTSB-204ENST00000453527 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
CTSB-204ENST00000453527 GOLGA2Q08379 1002 aa23.45■■□□□ 1.35
CTSB-204ENST00000453527 DIP2AQ14689 1571 aa23.45■■□□□ 1.34
CTSB-204ENST00000453527 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
CTSB-204ENST00000453527 RRP1P56182 461 aaKnown RBP23.43■■□□□ 1.34
CTSB-204ENST00000453527 CDC42BPGQ6DT37 1551 aa23.43■■□□□ 1.34
CTSB-204ENST00000453527 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
CTSB-204ENST00000453527 DUSP27Q5VZP5 1158 aa23.42■■□□□ 1.34
CTSB-204ENST00000453527 RUNDC1Q96C34 613 aa23.42■■□□□ 1.34
CTSB-204ENST00000453527 AMOTL2Q9Y2J4 779 aa23.41■■□□□ 1.34
CTSB-204ENST00000453527 MON2Q7Z3U7 1717 aa23.41■■□□□ 1.34
CTSB-204ENST00000453527 AKAP12Q02952 1782 aa23.4■■□□□ 1.34
CTSB-204ENST00000453527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.4■■□□□ 1.34
CTSB-204ENST00000453527 SLFN5Q08AF3 891 aa23.4■■□□□ 1.34
CTSB-204ENST00000453527 ITSN1Q15811 1721 aa23.39■■□□□ 1.34
CTSB-204ENST00000453527 PRR36Q9H6K5 1346 aa23.39■■□□□ 1.34
CTSB-204ENST00000453527 TRMT2AQ8IZ69 625 aaKnown RBP23.39■■□□□ 1.34
CTSB-204ENST00000453527 COL3A1P02461 1466 aaPredicted RBP23.39■■□□□ 1.33
CTSB-204ENST00000453527 NCKAP5LQ9HCH0 1330 aa23.39■■□□□ 1.33
CTSB-204ENST00000453527 PTCH1Q13635 1447 aa23.38■■□□□ 1.33
CTSB-204ENST00000453527 ZNF692Q9BU19 519 aaPredicted RBP23.37■■□□□ 1.33
CTSB-204ENST00000453527 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
CTSB-204ENST00000453527 ZNF142P52746 1687 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms