RNA–Protein interactions for RNA: ENST00000450554.6

U2AF2-202, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene U2AF2, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-202ENST00000450554 MYOM1P52179 1685 aa27.31■■□□□ 1.96
U2AF2-202ENST00000450554 RUNDC1Q96C34 613 aa27.3■■□□□ 1.96
U2AF2-202ENST00000450554 IQGAP3Q86VI3 1631 aa27.3■■□□□ 1.96
U2AF2-202ENST00000450554 ISY1Q9ULR0 285 aaKnown RBP27.29■■□□□ 1.96
U2AF2-202ENST00000450554 MADDQ8WXG6 1647 aa27.29■■□□□ 1.96
U2AF2-202ENST00000450554 FOXD4L1Q9NU39 408 aa27.29■■□□□ 1.96
U2AF2-202ENST00000450554 ATP10AO60312 1499 aa27.27■■□□□ 1.96
U2AF2-202ENST00000450554 HSP90AB1P08238 724 aaKnown RBP27.26■■□□□ 1.95
U2AF2-202ENST00000450554 CDC42BPBQ9Y5S2 1711 aa27.26■■□□□ 1.95
U2AF2-202ENST00000450554 DZIP1LQ8IYY4 767 aaKnown RBP27.26■■□□□ 1.95
U2AF2-202ENST00000450554 ZKSCAN2Q63HK3 967 aa27.25■■□□□ 1.95
U2AF2-202ENST00000450554 MORC1Q86VD1 984 aa27.25■■□□□ 1.95
U2AF2-202ENST00000450554 POLR3AO14802 1390 aaPredicted RBP27.25■■□□□ 1.95
U2AF2-202ENST00000450554 GBP4Q96PP9 640 aa27.24■■□□□ 1.95
U2AF2-202ENST00000450554 TPM2P07951 284 aa27.24■■□□□ 1.95
U2AF2-202ENST00000450554 KIAA1211Q6ZU35 1233 aa27.24■■□□□ 1.95
U2AF2-202ENST00000450554 ARHGAP5Q13017 1502 aa27.23■■□□□ 1.95
U2AF2-202ENST00000450554 WDR63Q8IWG1 891 aa27.22■■□□□ 1.95
U2AF2-202ENST00000450554 DDIT3P35638 169 aa27.22■■□□□ 1.95
U2AF2-202ENST00000450554 ITPRIPQ8IWB1 547 aa27.22■■□□□ 1.95
U2AF2-202ENST00000450554 SCAPERQ9BY12 1400 aa27.21■■□□□ 1.95
U2AF2-202ENST00000450554 KDM5AP29375 1690 aaKnown RBP27.21■■□□□ 1.95
U2AF2-202ENST00000450554 PREX2Q70Z35 1606 aa27.2■■□□□ 1.94
U2AF2-202ENST00000450554 CFAP70Q5T0N1 1121 aa27.2■■□□□ 1.94
U2AF2-202ENST00000450554 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
U2AF2-202ENST00000450554 TSR2Q969E8 191 aaKnown RBP27.19■■□□□ 1.94
U2AF2-202ENST00000450554 SMC4Q9NTJ3 1288 aa27.19■■□□□ 1.94
U2AF2-202ENST00000450554 NCOA3Q9Y6Q9 1424 aa27.18■■□□□ 1.94
U2AF2-202ENST00000450554 SMC5Q8IY18 1101 aa27.17■■□□□ 1.94
U2AF2-202ENST00000450554 PHF23Q9BUL5 403 aaPredicted RBP27.17■■□□□ 1.94
U2AF2-202ENST00000450554 RAB3GAP1Q15042 981 aa27.16■■□□□ 1.94
U2AF2-202ENST00000450554 PDCL3Q9H2J4 239 aa27.16■■□□□ 1.94
U2AF2-202ENST00000450554 ERVK-7P63135 1459 aa27.16■■□□□ 1.94
U2AF2-202ENST00000450554 SKOR2Q2VWA4 1001 aaPredicted RBP27.16■■□□□ 1.94
U2AF2-202ENST00000450554 NASPP49321 788 aaPredicted RBP27.15■■□□□ 1.94
U2AF2-202ENST00000450554 TRIM27P14373 513 aa27.15■■□□□ 1.94
U2AF2-202ENST00000450554 SNX21Q969T3 373 aa27.14■■□□□ 1.94
U2AF2-202ENST00000450554 LNPKQ9C0E8 428 aa27.14■■□□□ 1.94
U2AF2-202ENST00000450554 CEP152O94986 1710 aa27.14■■□□□ 1.94
U2AF2-202ENST00000450554 RBM25P49756 843 aaKnown RBP27.14■■□□□ 1.94
U2AF2-202ENST00000450554 HDAC1Q13547 482 aaPredicted RBP27.14■■□□□ 1.94
U2AF2-202ENST00000450554 MTHFSP49914 203 aa27.14■■□□□ 1.93
U2AF2-202ENST00000450554 RBM10P98175 930 aaKnown RBP27.13■■□□□ 1.93
U2AF2-202ENST00000450554 CIZ1Q9ULV3 898 aaPredicted RBP27.13■■□□□ 1.93
U2AF2-202ENST00000450554 DUOX2Q9NRD8 1548 aa27.13■■□□□ 1.93
U2AF2-202ENST00000450554 CCDC173Q0VFZ6 552 aa27.13■■□□□ 1.93
U2AF2-202ENST00000450554 NSD3Q9BZ95 1437 aa27.12■■□□□ 1.93
U2AF2-202ENST00000450554 CD2BP2O95400 341 aaKnown RBP27.12■■□□□ 1.93
U2AF2-202ENST00000450554 IQSEC2Q5JU85 1478 aa27.12■■□□□ 1.93
U2AF2-202ENST00000450554 ANP32BQ92688 251 aaKnown RBP27.11■■□□□ 1.93
U2AF2-202ENST00000450554 TTC37Q6PGP7 1564 aa27.11■■□□□ 1.93
U2AF2-202ENST00000450554 ZSCAN30Q86W11 494 aa27.11■■□□□ 1.93
U2AF2-202ENST00000450554 DDX19BQ9UMR2 479 aa27.11■■□□□ 1.93
U2AF2-202ENST00000450554 U2AF1L5P0DN76 240 aaPredicted RBP27.1■■□□□ 1.93
U2AF2-202ENST00000450554 U2AF1Q01081 240 aaKnown RBP eCLIP27.1■■□□□ 1.93
U2AF2-202ENST00000450554 MSNP26038 577 aaKnown RBP27.1■■□□□ 1.93
U2AF2-202ENST00000450554 SSFA2P28290 1259 aa27.1■■□□□ 1.93
U2AF2-202ENST00000450554 EXOSC9Q06265 439 aaKnown RBP27.1■■□□□ 1.93
U2AF2-202ENST00000450554 SLC12A5Q9H2X9 1139 aa27.09■■□□□ 1.93
U2AF2-202ENST00000450554 SSH1Q8WYL5 1049 aa27.08■■□□□ 1.93
U2AF2-202ENST00000450554 DDX49Q9Y6V7 483 aaKnown RBP27.08■■□□□ 1.93
U2AF2-202ENST00000450554 SHPRHQ149N8 1683 aa27.08■■□□□ 1.92
U2AF2-202ENST00000450554 SPHKAPQ2M3C7 1700 aa27.07■■□□□ 1.92
U2AF2-202ENST00000450554 CCDC27Q2M243 656 aa27.07■■□□□ 1.92
U2AF2-202ENST00000450554 RBM42Q9BTD8 480 aaKnown RBP27.07■■□□□ 1.92
U2AF2-202ENST00000450554 TMEM57Q8N5G2 664 aa27.06■■□□□ 1.92
U2AF2-202ENST00000450554 CFAP53Q96M91 514 aa27.06■■□□□ 1.92
U2AF2-202ENST00000450554 PPP1R9BQ96SB3 815 aa27.06■■□□□ 1.92
U2AF2-202ENST00000450554 NOB1Q9ULX3 412 aaKnown RBP27.06■■□□□ 1.92
U2AF2-202ENST00000450554 ATF7IPQ6VMQ6 1270 aa27.06■■□□□ 1.92
U2AF2-202ENST00000450554 STAC3Q96MF2 364 aa27.05■■□□□ 1.92
U2AF2-202ENST00000450554 GOLGA6L22H0YM25 854 aa27.05■■□□□ 1.92
U2AF2-202ENST00000450554 ADGRF5Q8IZF2 1346 aa27.04■■□□□ 1.92
U2AF2-202ENST00000450554 OFD1O75665 1012 aa27.04■■□□□ 1.92
U2AF2-202ENST00000450554 PTMSP20962 102 aa27.04■■□□□ 1.92
U2AF2-202ENST00000450554 KIF2CQ99661 725 aa27.04■■□□□ 1.92
U2AF2-202ENST00000450554 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
U2AF2-202ENST00000450554 SLC24A1O60721 1099 aa27.03■■□□□ 1.92
U2AF2-202ENST00000450554 K7ELQ4 463 aaPredicted RBP27.03■■□□□ 1.92
U2AF2-202ENST00000450554 FAM13BQ9NYF5 915 aa27.03■■□□□ 1.92
U2AF2-202ENST00000450554 NCLP19338 710 aaKnown RBP27.02■■□□□ 1.92
U2AF2-202ENST00000450554 R3HCC1Q9Y3T6 440 aaKnown RBP27.02■■□□□ 1.92
U2AF2-202ENST00000450554 KANK1Q14678 1352 aa27.02■■□□□ 1.92
U2AF2-202ENST00000450554 NUCB1Q02818 461 aa27.02■■□□□ 1.92
U2AF2-202ENST00000450554 GAS2L2Q8NHY3 880 aa27.02■■□□□ 1.92
U2AF2-202ENST00000450554 RIPK4P57078 832 aa27.01■■□□□ 1.91
U2AF2-202ENST00000450554 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.01■■□□□ 1.91
U2AF2-202ENST00000450554 CLTCL1P53675 1640 aa27■■□□□ 1.91
U2AF2-202ENST00000450554 CHD1LQ86WJ1 897 aa27■■□□□ 1.91
U2AF2-202ENST00000450554 TRPM2O94759 1503 aa27■■□□□ 1.91
U2AF2-202ENST00000450554 ZBTB40Q9NUA8 1239 aa27■■□□□ 1.91
U2AF2-202ENST00000450554 ARID3AQ99856 593 aa26.98■■□□□ 1.91
U2AF2-202ENST00000450554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.98■■□□□ 1.911e-22■■□□□ 11.5
U2AF2-202ENST00000450554 BAG4O95429 457 aaKnown RBP26.98■■□□□ 1.91
U2AF2-202ENST00000450554 KLHL40Q2TBA0 621 aa26.98■■□□□ 1.91
U2AF2-202ENST00000450554 TRAK1Q9UPV9 953 aa26.97■■□□□ 1.91
U2AF2-202ENST00000450554 ANKRD45Q5TZF3 282 aa26.96■■□□□ 1.91
U2AF2-202ENST00000450554 ZNF518AQ6AHZ1 1483 aa26.96■■□□□ 1.91
U2AF2-202ENST00000450554 PTPRTO14522 1441 aa26.96■■□□□ 1.91
U2AF2-202ENST00000450554 U2SURPO15042 1029 aaKnown RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms