RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
COPS7B-213ENST00000449174 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
COPS7B-213ENST00000449174 FOXD1Q16676 465 aa17.34■□□□□ 0.37
COPS7B-213ENST00000449174 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
COPS7B-213ENST00000449174 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
COPS7B-213ENST00000449174 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.36
COPS7B-213ENST00000449174 ADGRF5Q8IZF2 1346 aa17.33■□□□□ 0.36
COPS7B-213ENST00000449174 PIK3C2GO75747 1445 aa17.32■□□□□ 0.36
COPS7B-213ENST00000449174 ABCC11Q96J66 1382 aa17.32■□□□□ 0.36
COPS7B-213ENST00000449174 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
COPS7B-213ENST00000449174 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
COPS7B-213ENST00000449174 NGLY1Q96IV0 654 aa17.31■□□□□ 0.36
COPS7B-213ENST00000449174 ADAMTS2O95450 1211 aa17.3■□□□□ 0.36
COPS7B-213ENST00000449174 ESCO1Q5FWF5 840 aa17.3■□□□□ 0.36
COPS7B-213ENST00000449174 RGS12O14924 1447 aa17.3■□□□□ 0.36
COPS7B-213ENST00000449174 PXDNQ92626 1479 aa17.29■□□□□ 0.36
COPS7B-213ENST00000449174 KIF1AQ12756 1690 aa17.27■□□□□ 0.36
COPS7B-213ENST00000449174 MYOM2P54296 1465 aa17.27■□□□□ 0.36
COPS7B-213ENST00000449174 FNBP4Q8N3X1 1017 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-213ENST00000449174 SIRT1Q96EB6 747 aa17.27■□□□□ 0.36
COPS7B-213ENST00000449174 STK26Q9P289 416 aa17.27■□□□□ 0.36
COPS7B-213ENST00000449174 USP21Q9UK80 565 aa17.27■□□□□ 0.36
COPS7B-213ENST00000449174 TRPC5Q9UL62 973 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-213ENST00000449174 YTHDC2Q9H6S0 1430 aaKnown RBP17.27■□□□□ 0.35
COPS7B-213ENST00000449174 FMN2Q9NZ56 1722 aa17.26■□□□□ 0.35
COPS7B-213ENST00000449174 MARF1Q9Y4F3 1742 aaKnown RBP17.25■□□□□ 0.35
COPS7B-213ENST00000449174 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
COPS7B-213ENST00000449174 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
COPS7B-213ENST00000449174 FOXO3O43524 673 aa17.24■□□□□ 0.35
COPS7B-213ENST00000449174 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
COPS7B-213ENST00000449174 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
COPS7B-213ENST00000449174 ATRNO75882 1429 aa17.22■□□□□ 0.35
COPS7B-213ENST00000449174 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
COPS7B-213ENST00000449174 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
COPS7B-213ENST00000449174 PLEKHH1Q9ULM0 1364 aa17.22■□□□□ 0.35
COPS7B-213ENST00000449174 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.19■□□□□ 0.34
COPS7B-213ENST00000449174 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
COPS7B-213ENST00000449174 DLC1Q96QB1 1528 aa17.18■□□□□ 0.34
COPS7B-213ENST00000449174 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
COPS7B-213ENST00000449174 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
COPS7B-213ENST00000449174 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
COPS7B-213ENST00000449174 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
COPS7B-213ENST00000449174 PSME1Q06323 249 aa17.16■□□□□ 0.34
COPS7B-213ENST00000449174 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
COPS7B-213ENST00000449174 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
COPS7B-213ENST00000449174 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
COPS7B-213ENST00000449174 ADGRB2O60241 1585 aa17.15■□□□□ 0.34
COPS7B-213ENST00000449174 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
COPS7B-213ENST00000449174 TNS3Q68CZ2 1445 aa17.14■□□□□ 0.33
COPS7B-213ENST00000449174 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
COPS7B-213ENST00000449174 STAC3Q96MF2 364 aa17.14■□□□□ 0.33
COPS7B-213ENST00000449174 SLIT2O94813 1529 aa17.14■□□□□ 0.33
COPS7B-213ENST00000449174 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
COPS7B-213ENST00000449174 CCDC125Q86Z20 511 aa17.13■□□□□ 0.33
COPS7B-213ENST00000449174 GJD4Q96KN9 370 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-213ENST00000449174 PRAM1Q96QH2 718 aa17.13■□□□□ 0.33
COPS7B-213ENST00000449174 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
COPS7B-213ENST00000449174 ADGRB1O14514 1584 aa17.12■□□□□ 0.33
COPS7B-213ENST00000449174 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
COPS7B-213ENST00000449174 POGKQ9P215 609 aa17.12■□□□□ 0.33
COPS7B-213ENST00000449174 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
COPS7B-213ENST00000449174 EIF3AQ14152 1382 aaKnown RBP17.12■□□□□ 0.33
COPS7B-213ENST00000449174 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-213ENST00000449174 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
COPS7B-213ENST00000449174 HRCP23327 699 aa17.09■□□□□ 0.33
COPS7B-213ENST00000449174 RALGAPBQ86X10 1494 aa17.08■□□□□ 0.32
COPS7B-213ENST00000449174 ABCA3Q99758 1704 aa17.07■□□□□ 0.32
COPS7B-213ENST00000449174 GLI3P10071 1580 aa17.07■□□□□ 0.32
COPS7B-213ENST00000449174 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
COPS7B-213ENST00000449174 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
COPS7B-213ENST00000449174 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
COPS7B-213ENST00000449174 GPRASP1Q5JY77 1395 aa17.04■□□□□ 0.32
COPS7B-213ENST00000449174 VPS72Q15906 364 aa17.04■□□□□ 0.32
COPS7B-213ENST00000449174 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
COPS7B-213ENST00000449174 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
COPS7B-213ENST00000449174 TRPM3Q9HCF6 1732 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-213ENST00000449174 LMOD2Q6P5Q4 547 aa17.03■□□□□ 0.32
COPS7B-213ENST00000449174 PMFBP1Q8TBY8 1022 aa17.02■□□□□ 0.32
COPS7B-213ENST00000449174 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
COPS7B-213ENST00000449174 BLMP54132 1417 aaPredicted RBP17.02■□□□□ 0.31
COPS7B-213ENST00000449174 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
COPS7B-213ENST00000449174 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
COPS7B-213ENST00000449174 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
COPS7B-213ENST00000449174 KDM2AQ9Y2K7 1162 aa17.01■□□□□ 0.31
COPS7B-213ENST00000449174 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
COPS7B-213ENST00000449174 ONECUT3O60422 494 aaPredicted RBP17■□□□□ 0.31
COPS7B-213ENST00000449174 HIRIP3Q9BW71 556 aaPredicted RBP17■□□□□ 0.31
COPS7B-213ENST00000449174 EP400Q96L91 3159 aa17■□□□□ 0.31
COPS7B-213ENST00000449174 MINK1Q8N4C8 1332 aaPredicted RBP16.99■□□□□ 0.31
COPS7B-213ENST00000449174 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
COPS7B-213ENST00000449174 COL14A1Q05707 1796 aaKnown RBP16.99■□□□□ 0.31
COPS7B-213ENST00000449174 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
COPS7B-213ENST00000449174 SEPT12Q8IYM1 358 aa16.98■□□□□ 0.31
COPS7B-213ENST00000449174 NRAPQ86VF7 1730 aa16.98■□□□□ 0.31
COPS7B-213ENST00000449174 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
COPS7B-213ENST00000449174 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
COPS7B-213ENST00000449174 CCDC9Q9Y3X0 531 aaKnown RBP16.97■□□□□ 0.31
COPS7B-213ENST00000449174 KIAA1210Q9ULL0 1709 aa16.96■□□□□ 0.31
COPS7B-213ENST00000449174 SF3B2Q13435 895 aaKnown RBP16.96■□□□□ 0.31
COPS7B-213ENST00000449174 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms