RNA–Protein interactions for RNA: ENST00000448893.1

RHBDF1-205, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-205ENST00000448893 FOXO3O43524 673 aa18.38■□□□□ 0.53
RHBDF1-205ENST00000448893 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
RHBDF1-205ENST00000448893 BCL9LQ86UU0 1499 aa18.37■□□□□ 0.53
RHBDF1-205ENST00000448893 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
RHBDF1-205ENST00000448893 KIF1BO60333 1816 aa18.35■□□□□ 0.53
RHBDF1-205ENST00000448893 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
RHBDF1-205ENST00000448893 XPCQ01831 940 aaPredicted RBP18.34■□□□□ 0.53
RHBDF1-205ENST00000448893 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
RHBDF1-205ENST00000448893 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.52
RHBDF1-205ENST00000448893 HFM1A2PYH4 1435 aa18.32■□□□□ 0.52
RHBDF1-205ENST00000448893 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
RHBDF1-205ENST00000448893 MYOM2P54296 1465 aa18.32■□□□□ 0.52
RHBDF1-205ENST00000448893 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
RHBDF1-205ENST00000448893 WAPLQ7Z5K2 1190 aa18.3■□□□□ 0.52
RHBDF1-205ENST00000448893 LRPPRCP42704 1394 aaKnown RBP18.3■□□□□ 0.52
RHBDF1-205ENST00000448893 DEFB132Q7Z7B7 95 aa18.28■□□□□ 0.52
RHBDF1-205ENST00000448893 STK26Q9P289 416 aa18.28■□□□□ 0.52
RHBDF1-205ENST00000448893 MARF1Q9Y4F3 1742 aaKnown RBP18.27■□□□□ 0.52
RHBDF1-205ENST00000448893 PXDNQ92626 1479 aa18.26■□□□□ 0.51
RHBDF1-205ENST00000448893 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
RHBDF1-205ENST00000448893 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
RHBDF1-205ENST00000448893 BLMP54132 1417 aaPredicted RBP18.25■□□□□ 0.51
RHBDF1-205ENST00000448893 SF3B2Q13435 895 aaKnown RBP18.25■□□□□ 0.51
RHBDF1-205ENST00000448893 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
RHBDF1-205ENST00000448893 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
RHBDF1-205ENST00000448893 PPLO60437 1756 aa18.25■□□□□ 0.51
RHBDF1-205ENST00000448893 NAIPQ13075 1403 aa18.24■□□□□ 0.51
RHBDF1-205ENST00000448893 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
RHBDF1-205ENST00000448893 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
RHBDF1-205ENST00000448893 CDC42BPGQ6DT37 1551 aa18.23■□□□□ 0.51
RHBDF1-205ENST00000448893 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
RHBDF1-205ENST00000448893 VPS72Q15906 364 aa18.22■□□□□ 0.51
RHBDF1-205ENST00000448893 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
RHBDF1-205ENST00000448893 SLIT2O94813 1529 aa18.22■□□□□ 0.51
RHBDF1-205ENST00000448893 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
RHBDF1-205ENST00000448893 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
RHBDF1-205ENST00000448893 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
RHBDF1-205ENST00000448893 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
RHBDF1-205ENST00000448893 PSME1Q06323 249 aa18.19■□□□□ 0.5
RHBDF1-205ENST00000448893 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
RHBDF1-205ENST00000448893 CABLES1Q8TDN4 633 aa18.19■□□□□ 0.5
RHBDF1-205ENST00000448893 SIRT1Q96EB6 747 aa18.18■□□□□ 0.5
RHBDF1-205ENST00000448893 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
RHBDF1-205ENST00000448893 TECPR2O15040 1411 aa18.17■□□□□ 0.5
RHBDF1-205ENST00000448893 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
RHBDF1-205ENST00000448893 GLI3P10071 1580 aa18.17■□□□□ 0.5
RHBDF1-205ENST00000448893 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
RHBDF1-205ENST00000448893 FAM83GA6ND36 823 aa18.16■□□□□ 0.5
RHBDF1-205ENST00000448893 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
RHBDF1-205ENST00000448893 BRWD3Q6RI45 1802 aa18.15■□□□□ 0.5
RHBDF1-205ENST00000448893 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
RHBDF1-205ENST00000448893 PSDA5PKW4 1024 aaPredicted RBP18.13■□□□□ 0.49
RHBDF1-205ENST00000448893 HRCP23327 699 aa18.13■□□□□ 0.49
RHBDF1-205ENST00000448893 LMOD2Q6P5Q4 547 aa18.13■□□□□ 0.49
RHBDF1-205ENST00000448893 CCDC144AA2RUR9 1427 aa18.13■□□□□ 0.49
RHBDF1-205ENST00000448893 BAG6P46379 1132 aa18.12■□□□□ 0.49
RHBDF1-205ENST00000448893 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
RHBDF1-205ENST00000448893 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
RHBDF1-205ENST00000448893 KNDC1Q76NI1 1749 aa18.1■□□□□ 0.49
RHBDF1-205ENST00000448893 C14orf93Q9H972 538 aaKnown RBP18.1■□□□□ 0.49
RHBDF1-205ENST00000448893 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
RHBDF1-205ENST00000448893 USP32Q8NFA0 1604 aa18.09■□□□□ 0.49
RHBDF1-205ENST00000448893 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
RHBDF1-205ENST00000448893 FAM98CQ17RN3 349 aaKnown RBP18.09■□□□□ 0.49
RHBDF1-205ENST00000448893 SBNO1A3KN83 1393 aa18.08■□□□□ 0.49
RHBDF1-205ENST00000448893 A0A0G2JS52 829 aa18.08■□□□□ 0.48
RHBDF1-205ENST00000448893 MYT1Q01538 1121 aa18.08■□□□□ 0.48
RHBDF1-205ENST00000448893 EN1Q05925 392 aaPredicted RBP18.08■□□□□ 0.48
RHBDF1-205ENST00000448893 RGPD8O14715 1765 aaPredicted RBP18.08■□□□□ 0.48
RHBDF1-205ENST00000448893 KIF1AQ12756 1690 aa18.08■□□□□ 0.48
RHBDF1-205ENST00000448893 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
RHBDF1-205ENST00000448893 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
RHBDF1-205ENST00000448893 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
RHBDF1-205ENST00000448893 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
RHBDF1-205ENST00000448893 MPHOSPH9Q99550 1183 aa18.06■□□□□ 0.48
RHBDF1-205ENST00000448893 CFAP70Q5T0N1 1121 aa18.05■□□□□ 0.48
RHBDF1-205ENST00000448893 PIK3C2GO75747 1445 aa18.05■□□□□ 0.48
RHBDF1-205ENST00000448893 ARHGEF10O15013 1369 aa18.04■□□□□ 0.48
RHBDF1-205ENST00000448893 NWD2Q9ULI1 1742 aa18.04■□□□□ 0.48
RHBDF1-205ENST00000448893 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
RHBDF1-205ENST00000448893 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
RHBDF1-205ENST00000448893 PRAM1Q96QH2 718 aa18.04■□□□□ 0.48
RHBDF1-205ENST00000448893 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
RHBDF1-205ENST00000448893 PLCH1Q4KWH8 1693 aa18.03■□□□□ 0.48
RHBDF1-205ENST00000448893 R3HDM1Q15032 1099 aaKnown RBP18.03■□□□□ 0.48
RHBDF1-205ENST00000448893 LRP5O75197 1615 aa18.02■□□□□ 0.48
RHBDF1-205ENST00000448893 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
RHBDF1-205ENST00000448893 POGKQ9P215 609 aa18.01■□□□□ 0.47
RHBDF1-205ENST00000448893 NRXN1Q9ULB1 1477 aa18■□□□□ 0.47
RHBDF1-205ENST00000448893 SPATA31A5Q5VU36 1347 aa17.99■□□□□ 0.47
RHBDF1-205ENST00000448893 SPATA31A7Q8IWB4 1347 aa17.99■□□□□ 0.47
RHBDF1-205ENST00000448893 EZH2Q15910 746 aaKnown RBP17.99■□□□□ 0.47
RHBDF1-205ENST00000448893 CAMKK2Q96RR4 588 aa17.97■□□□□ 0.47
RHBDF1-205ENST00000448893 NRAPQ86VF7 1730 aa17.95■□□□□ 0.46
RHBDF1-205ENST00000448893 GPRASP1Q5JY77 1395 aa17.95■□□□□ 0.46
RHBDF1-205ENST00000448893 TRIM37O94972 964 aa17.94■□□□□ 0.46
RHBDF1-205ENST00000448893 FAM196AQ6ZSG2 479 aa17.94■□□□□ 0.46
RHBDF1-205ENST00000448893 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
RHBDF1-205ENST00000448893 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
RHBDF1-205ENST00000448893 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms