RNA–Protein interactions for RNA: ENST00000448893.1

RHBDF1-205, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-205ENST00000448893 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.51
RHBDF1-205ENST00000448893 ABCC9O60706 1549 aa28.09■■■□□ 2.09
RHBDF1-205ENST00000448893 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
RHBDF1-205ENST00000448893 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
RHBDF1-205ENST00000448893 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
RHBDF1-205ENST00000448893 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
RHBDF1-205ENST00000448893 NACADO15069 1562 aa26.25■■□□□ 1.79
RHBDF1-205ENST00000448893 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
RHBDF1-205ENST00000448893 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
RHBDF1-205ENST00000448893 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
RHBDF1-205ENST00000448893 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
RHBDF1-205ENST00000448893 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
RHBDF1-205ENST00000448893 ZCCHC6Q5VYS8 1495 aaKnown RBP25.35■■□□□ 1.65
RHBDF1-205ENST00000448893 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
RHBDF1-205ENST00000448893 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
RHBDF1-205ENST00000448893 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
RHBDF1-205ENST00000448893 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
RHBDF1-205ENST00000448893 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
RHBDF1-205ENST00000448893 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
RHBDF1-205ENST00000448893 CUX2O14529 1486 aa24.35■■□□□ 1.49
RHBDF1-205ENST00000448893 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
RHBDF1-205ENST00000448893 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
RHBDF1-205ENST00000448893 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.46
RHBDF1-205ENST00000448893 HMGXB3Q12766 1538 aa24.03■■□□□ 1.44
RHBDF1-205ENST00000448893 SMARCA2P51531 1590 aa24.01■■□□□ 1.43
RHBDF1-205ENST00000448893 NESP48681 1621 aa24.01■■□□□ 1.43
RHBDF1-205ENST00000448893 SMARCA4P51532 1647 aa24■■□□□ 1.43
RHBDF1-205ENST00000448893 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
RHBDF1-205ENST00000448893 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
RHBDF1-205ENST00000448893 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
RHBDF1-205ENST00000448893 THOC2Q8NI27 1593 aaKnown RBP23.8■■□□□ 1.4
RHBDF1-205ENST00000448893 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
RHBDF1-205ENST00000448893 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
RHBDF1-205ENST00000448893 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
RHBDF1-205ENST00000448893 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
RHBDF1-205ENST00000448893 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
RHBDF1-205ENST00000448893 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
RHBDF1-205ENST00000448893 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
RHBDF1-205ENST00000448893 WDR62O43379 1518 aa23.4■■□□□ 1.34
RHBDF1-205ENST00000448893 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
RHBDF1-205ENST00000448893 WIZO95785 1651 aa23.35■■□□□ 1.33
RHBDF1-205ENST00000448893 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
RHBDF1-205ENST00000448893 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
RHBDF1-205ENST00000448893 CFTRP13569 1480 aa23.17■■□□□ 1.3
RHBDF1-205ENST00000448893 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
RHBDF1-205ENST00000448893 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
RHBDF1-205ENST00000448893 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
RHBDF1-205ENST00000448893 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
RHBDF1-205ENST00000448893 CYB5RLQ6IPT4 315 aa22.86■■□□□ 1.25
RHBDF1-205ENST00000448893 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
RHBDF1-205ENST00000448893 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
RHBDF1-205ENST00000448893 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
RHBDF1-205ENST00000448893 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
RHBDF1-205ENST00000448893 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
RHBDF1-205ENST00000448893 ARHGEF11O15085 1522 aa22.78■■□□□ 1.24
RHBDF1-205ENST00000448893 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
RHBDF1-205ENST00000448893 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
RHBDF1-205ENST00000448893 TRHP20396 242 aaPredicted RBP22.72■■□□□ 1.23
RHBDF1-205ENST00000448893 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
RHBDF1-205ENST00000448893 FBLN2P98095 1184 aa22.68■■□□□ 1.22
RHBDF1-205ENST00000448893 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.221e-8■■■■■ 33.3
RHBDF1-205ENST00000448893 EIF4G3O43432 1585 aaKnown RBP22.66■■□□□ 1.22
RHBDF1-205ENST00000448893 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
RHBDF1-205ENST00000448893 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
RHBDF1-205ENST00000448893 CHD1O14646 1710 aa22.57■■□□□ 1.2
RHBDF1-205ENST00000448893 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
RHBDF1-205ENST00000448893 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
RHBDF1-205ENST00000448893 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
RHBDF1-205ENST00000448893 SOGA1O94964 1423 aa22.47■■□□□ 1.19
RHBDF1-205ENST00000448893 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
RHBDF1-205ENST00000448893 RAD54L2Q9Y4B4 1467 aa22.45■■□□□ 1.18
RHBDF1-205ENST00000448893 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
RHBDF1-205ENST00000448893 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
RHBDF1-205ENST00000448893 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
RHBDF1-205ENST00000448893 WDR97A6NE52 1622 aa22.3■■□□□ 1.16
RHBDF1-205ENST00000448893 FGD5Q6ZNL6 1462 aa22.28■■□□□ 1.16
RHBDF1-205ENST00000448893 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
RHBDF1-205ENST00000448893 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
RHBDF1-205ENST00000448893 CUX1P39880 1505 aa22.23■■□□□ 1.15
RHBDF1-205ENST00000448893 SYNJ1O43426 1573 aa22.22■■□□□ 1.15
RHBDF1-205ENST00000448893 SYNJ2O15056 1496 aa22.2■■□□□ 1.14
RHBDF1-205ENST00000448893 GAPVD1Q14C86 1478 aa22.15■■□□□ 1.14
RHBDF1-205ENST00000448893 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
RHBDF1-205ENST00000448893 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
RHBDF1-205ENST00000448893 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
RHBDF1-205ENST00000448893 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
RHBDF1-205ENST00000448893 GRIN2AQ12879 1464 aa21.93■■□□□ 1.1
RHBDF1-205ENST00000448893 NUP160Q12769 1436 aa21.89■■□□□ 1.1
RHBDF1-205ENST00000448893 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.09
RHBDF1-205ENST00000448893 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
RHBDF1-205ENST00000448893 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
RHBDF1-205ENST00000448893 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
RHBDF1-205ENST00000448893 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
RHBDF1-205ENST00000448893 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
RHBDF1-205ENST00000448893 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
RHBDF1-205ENST00000448893 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
RHBDF1-205ENST00000448893 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
RHBDF1-205ENST00000448893 FAM69CQ0P6D2 419 aa21.77■■□□□ 1.08
RHBDF1-205ENST00000448893 PRG4Q92954 1404 aaPredicted RBP21.77■■□□□ 1.08
RHBDF1-205ENST00000448893 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms