RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
SMIM12-204ENST00000446026 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.48
SMIM12-204ENST00000446026 NOP58Q9Y2X3 529 aaKnown RBP12.08□□□□□ -0.48
SMIM12-204ENST00000446026 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
SMIM12-204ENST00000446026 NHSL1Q5SYE7 1610 aa12.07□□□□□ -0.48
SMIM12-204ENST00000446026 NALCNQ8IZF0 1738 aa12.07□□□□□ -0.48
SMIM12-204ENST00000446026 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
SMIM12-204ENST00000446026 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
SMIM12-204ENST00000446026 CCDC7Q96M83 1385 aa12.07□□□□□ -0.48
SMIM12-204ENST00000446026 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
SMIM12-204ENST00000446026 TOM1O60784 492 aa12.06□□□□□ -0.48
SMIM12-204ENST00000446026 TECPR2O15040 1411 aa12.05□□□□□ -0.48
SMIM12-204ENST00000446026 SLC4A1APQ9BWU0 796 aaKnown RBP12.05□□□□□ -0.48
SMIM12-204ENST00000446026 ANKRD30BQ9BXX2 1392 aa12.04□□□□□ -0.48
SMIM12-204ENST00000446026 KIF7Q2M1P5 1343 aa12.04□□□□□ -0.48
SMIM12-204ENST00000446026 CDC42BPGQ6DT37 1551 aa12.04□□□□□ -0.48
SMIM12-204ENST00000446026 CCDC144AA2RUR9 1427 aa12.04□□□□□ -0.48
SMIM12-204ENST00000446026 DLC1Q96QB1 1528 aa12.03□□□□□ -0.48
SMIM12-204ENST00000446026 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
SMIM12-204ENST00000446026 RTL5Q5HYW3 569 aaPredicted RBP12.02□□□□□ -0.48
SMIM12-204ENST00000446026 MED1Q15648 1581 aaPredicted RBP12.02□□□□□ -0.49
SMIM12-204ENST00000446026 COL16A1Q07092 1604 aaPredicted RBP12.02□□□□□ -0.49
SMIM12-204ENST00000446026 PTPRUQ92729 1446 aa12.02□□□□□ -0.49
SMIM12-204ENST00000446026 STAC3Q96MF2 364 aa12.01□□□□□ -0.49
SMIM12-204ENST00000446026 PIK3C2GO75747 1445 aa12.01□□□□□ -0.49
SMIM12-204ENST00000446026 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
SMIM12-204ENST00000446026 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
SMIM12-204ENST00000446026 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
SMIM12-204ENST00000446026 MSH6P52701 1360 aa12□□□□□ -0.49
SMIM12-204ENST00000446026 ADGRL3Q9HAR2 1447 aa12□□□□□ -0.49
SMIM12-204ENST00000446026 KIF1AQ12756 1690 aa12□□□□□ -0.49
SMIM12-204ENST00000446026 UBAP1LF5GYI3 381 aa12□□□□□ -0.49
SMIM12-204ENST00000446026 ASXL1Q8IXJ9 1541 aa11.99□□□□□ -0.49
SMIM12-204ENST00000446026 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
SMIM12-204ENST00000446026 FMN2Q9NZ56 1722 aa11.99□□□□□ -0.49
SMIM12-204ENST00000446026 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
SMIM12-204ENST00000446026 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
SMIM12-204ENST00000446026 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.49
SMIM12-204ENST00000446026 SIRT1Q96EB6 747 aa11.96□□□□□ -0.5
SMIM12-204ENST00000446026 PKNOX2Q96KN3 472 aa11.96□□□□□ -0.5
SMIM12-204ENST00000446026 ADGRB1O14514 1584 aa11.94□□□□□ -0.5
SMIM12-204ENST00000446026 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
SMIM12-204ENST00000446026 MST1RQ04912 1400 aa11.93□□□□□ -0.5
SMIM12-204ENST00000446026 METP08581 1390 aa11.93□□□□□ -0.5
SMIM12-204ENST00000446026 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
SMIM12-204ENST00000446026 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
SMIM12-204ENST00000446026 ITSN1Q15811 1721 aa11.92□□□□□ -0.5
SMIM12-204ENST00000446026 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
SMIM12-204ENST00000446026 USP47Q96K76 1375 aa11.92□□□□□ -0.5
SMIM12-204ENST00000446026 SLC26A8Q96RN1 970 aa11.92□□□□□ -0.5
SMIM12-204ENST00000446026 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
SMIM12-204ENST00000446026 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
SMIM12-204ENST00000446026 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
SMIM12-204ENST00000446026 C19orf44Q9H6X5 657 aa11.91□□□□□ -0.5
SMIM12-204ENST00000446026 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
SMIM12-204ENST00000446026 AMOTL2Q9Y2J4 779 aa11.89□□□□□ -0.51
SMIM12-204ENST00000446026 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
SMIM12-204ENST00000446026 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
SMIM12-204ENST00000446026 YTHDC2Q9H6S0 1430 aaKnown RBP11.87□□□□□ -0.51
SMIM12-204ENST00000446026 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
SMIM12-204ENST00000446026 HSPA1LP34931 641 aa11.87□□□□□ -0.51
SMIM12-204ENST00000446026 ANP32AP39687 249 aaKnown RBP11.86□□□□□ -0.51
SMIM12-204ENST00000446026 JCADQ9P266 1359 aa11.86□□□□□ -0.51
SMIM12-204ENST00000446026 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
SMIM12-204ENST00000446026 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
SMIM12-204ENST00000446026 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
SMIM12-204ENST00000446026 C1orf167Q5SNV9 1468 aa11.86□□□□□ -0.51
SMIM12-204ENST00000446026 ROBO2Q9HCK4 1378 aa11.85□□□□□ -0.51
SMIM12-204ENST00000446026 C14orf93Q9H972 538 aaKnown RBP11.85□□□□□ -0.51
SMIM12-204ENST00000446026 TRPM1Q7Z4N2 1603 aa11.85□□□□□ -0.51
SMIM12-204ENST00000446026 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
SMIM12-204ENST00000446026 ST20-MTHFSA0A0A6YYL1 179 aa11.85□□□□□ -0.51
SMIM12-204ENST00000446026 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
SMIM12-204ENST00000446026 SLAIN2Q9P270 581 aa11.84□□□□□ -0.51
SMIM12-204ENST00000446026 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
SMIM12-204ENST00000446026 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
SMIM12-204ENST00000446026 USP32Q8NFA0 1604 aa11.84□□□□□ -0.51
SMIM12-204ENST00000446026 ABCA3Q99758 1704 aa11.84□□□□□ -0.51
SMIM12-204ENST00000446026 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
SMIM12-204ENST00000446026 PNISRQ8TF01 805 aaKnown RBP11.83□□□□□ -0.52
SMIM12-204ENST00000446026 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
SMIM12-204ENST00000446026 ATF3P18847 181 aa11.82□□□□□ -0.52
SMIM12-204ENST00000446026 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
SMIM12-204ENST00000446026 TRPM3Q9HCF6 1732 aaPredicted RBP11.82□□□□□ -0.52
SMIM12-204ENST00000446026 ADGRF5Q8IZF2 1346 aa11.82□□□□□ -0.52
SMIM12-204ENST00000446026 CRYBG1Q9Y4K1 1723 aa11.81□□□□□ -0.52
SMIM12-204ENST00000446026 NEFMP07197 916 aa11.81□□□□□ -0.52
SMIM12-204ENST00000446026 LAS1LQ9Y4W2 734 aaKnown RBP11.81□□□□□ -0.52
SMIM12-204ENST00000446026 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
SMIM12-204ENST00000446026 PXDNQ92626 1479 aa11.81□□□□□ -0.52
SMIM12-204ENST00000446026 CDK12Q9NYV4 1490 aaPredicted RBP11.8□□□□□ -0.52
SMIM12-204ENST00000446026 RGPD8O14715 1765 aaPredicted RBP11.79□□□□□ -0.52
SMIM12-204ENST00000446026 ALS2Q96Q42 1657 aa11.79□□□□□ -0.52
SMIM12-204ENST00000446026 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
SMIM12-204ENST00000446026 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
SMIM12-204ENST00000446026 NWD2Q9ULI1 1742 aa11.79□□□□□ -0.52
SMIM12-204ENST00000446026 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
SMIM12-204ENST00000446026 DISP3Q9P2K9 1392 aa11.78□□□□□ -0.52
SMIM12-204ENST00000446026 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
SMIM12-204ENST00000446026 SKAP1Q86WV1 359 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms