RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 POGKQ9P215 609 aa21■□□□□ 0.95
SNX13-204ENST00000444712 CARD14Q9BXL6 1004 aa21■□□□□ 0.95
SNX13-204ENST00000444712 NSD2O96028 1365 aa20.99■□□□□ 0.95
SNX13-204ENST00000444712 ABCC11Q96J66 1382 aa20.98■□□□□ 0.95
SNX13-204ENST00000444712 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
SNX13-204ENST00000444712 PRAM1Q96QH2 718 aa20.97■□□□□ 0.95
SNX13-204ENST00000444712 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
SNX13-204ENST00000444712 ERICH6BQ5W0A0 696 aa20.96■□□□□ 0.95
SNX13-204ENST00000444712 SLC12A5Q9H2X9 1139 aa20.96■□□□□ 0.95
SNX13-204ENST00000444712 CGNL1Q0VF96 1302 aa20.96■□□□□ 0.95
SNX13-204ENST00000444712 PDE3BQ13370 1112 aa20.95■□□□□ 0.94
SNX13-204ENST00000444712 WDR43Q15061 677 aaKnown RBP eCLIP20.95■□□□□ 0.94
SNX13-204ENST00000444712 SRPK2P78362 688 aaKnown RBP20.94■□□□□ 0.94
SNX13-204ENST00000444712 CPS1P31327 1500 aa20.93■□□□□ 0.94
SNX13-204ENST00000444712 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
SNX13-204ENST00000444712 ANKRD26Q9UPS8 1709 aa20.93■□□□□ 0.94
SNX13-204ENST00000444712 TECPR2O15040 1411 aa20.92■□□□□ 0.94
SNX13-204ENST00000444712 CABP2Q9NPB3 220 aa20.92■□□□□ 0.94
SNX13-204ENST00000444712 SIRT1Q96EB6 747 aa20.92■□□□□ 0.94
SNX13-204ENST00000444712 MINK1Q8N4C8 1332 aaPredicted RBP20.91■□□□□ 0.94
SNX13-204ENST00000444712 FAM135BQ49AJ0 1406 aa20.91■□□□□ 0.94
SNX13-204ENST00000444712 SLIT1O75093 1534 aa20.9■□□□□ 0.94
SNX13-204ENST00000444712 PLEKHG1Q9ULL1 1385 aa20.9■□□□□ 0.94
SNX13-204ENST00000444712 MORC1Q86VD1 984 aa20.9■□□□□ 0.94
SNX13-204ENST00000444712 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
SNX13-204ENST00000444712 TERF2IPQ9NYB0 399 aa20.9■□□□□ 0.94
SNX13-204ENST00000444712 POLR3AO14802 1390 aaPredicted RBP20.9■□□□□ 0.94
SNX13-204ENST00000444712 ARHGAP23Q9P227 1491 aa20.87■□□□□ 0.93
SNX13-204ENST00000444712 A0A1W2PP64 1363 aa20.87■□□□□ 0.93
SNX13-204ENST00000444712 METP08581 1390 aa20.87■□□□□ 0.93
SNX13-204ENST00000444712 ADAMTS8Q9UP79 889 aa20.87■□□□□ 0.93
SNX13-204ENST00000444712 KIF20BQ96Q89 1820 aa20.86■□□□□ 0.93
SNX13-204ENST00000444712 MED14O60244 1454 aa20.86■□□□□ 0.93
SNX13-204ENST00000444712 ATP7BP35670 1465 aa20.86■□□□□ 0.93
SNX13-204ENST00000444712 CDK19Q9BWU1 502 aa20.85■□□□□ 0.93
SNX13-204ENST00000444712 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
SNX13-204ENST00000444712 DIP2AQ14689 1571 aa20.85■□□□□ 0.93
SNX13-204ENST00000444712 HDGFL2Q7Z4V5 671 aaPredicted RBP20.85■□□□□ 0.93
SNX13-204ENST00000444712 BCANQ96GW7 911 aa20.84■□□□□ 0.93
SNX13-204ENST00000444712 ADAMTS13Q76LX8 1427 aa20.84■□□□□ 0.93
SNX13-204ENST00000444712 SHPRHQ149N8 1683 aa20.83■□□□□ 0.92
SNX13-204ENST00000444712 CD163L1Q9NR16 1453 aa20.82■□□□□ 0.92
SNX13-204ENST00000444712 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
SNX13-204ENST00000444712 RIMS1Q86UR5 1692 aaKnown RBP20.82■□□□□ 0.92
SNX13-204ENST00000444712 ADGRB2O60241 1585 aa20.82■□□□□ 0.92
SNX13-204ENST00000444712 NGEFQ8N5V2 710 aa20.82■□□□□ 0.92
SNX13-204ENST00000444712 THEMISQ8N1K5 641 aaPredicted RBP20.81■□□□□ 0.92
SNX13-204ENST00000444712 PLEKHH1Q9ULM0 1364 aa20.81■□□□□ 0.92
SNX13-204ENST00000444712 CFAP53Q96M91 514 aa20.8■□□□□ 0.92
SNX13-204ENST00000444712 RNF123Q5XPI4 1314 aa20.8■□□□□ 0.92
SNX13-204ENST00000444712 WAPLQ7Z5K2 1190 aa20.8■□□□□ 0.92
SNX13-204ENST00000444712 TXNDC2Q86VQ3 553 aa20.8■□□□□ 0.92
SNX13-204ENST00000444712 CEP170BQ9Y4F5 1589 aaPredicted RBP20.78■□□□□ 0.92
SNX13-204ENST00000444712 WASLO00401 505 aaPredicted RBP20.78■□□□□ 0.92
SNX13-204ENST00000444712 ZNF142P52746 1687 aaPredicted RBP20.77■□□□□ 0.92
SNX13-204ENST00000444712 ITSN1Q15811 1721 aa20.77■□□□□ 0.92
SNX13-204ENST00000444712 LTKP29376 864 aa20.77■□□□□ 0.91
SNX13-204ENST00000444712 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
SNX13-204ENST00000444712 SALL2Q9Y467 1007 aaPredicted RBP20.75■□□□□ 0.91
SNX13-204ENST00000444712 AKAP12Q02952 1782 aa20.75■□□□□ 0.91
SNX13-204ENST00000444712 MON2Q7Z3U7 1717 aa20.75■□□□□ 0.91
SNX13-204ENST00000444712 CDC42BPGQ6DT37 1551 aa20.74■□□□□ 0.91
SNX13-204ENST00000444712 PPP4R2Q9NY27 417 aa20.74■□□□□ 0.91
SNX13-204ENST00000444712 CABP1Q9NZU7 370 aa20.74■□□□□ 0.91
SNX13-204ENST00000444712 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
SNX13-204ENST00000444712 TBX22Q9Y458 520 aa20.73■□□□□ 0.91
SNX13-204ENST00000444712 PPIP5K1Q6PFW1 1433 aa20.73■□□□□ 0.91
SNX13-204ENST00000444712 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
SNX13-204ENST00000444712 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
SNX13-204ENST00000444712 MTHFSP49914 203 aa20.71■□□□□ 0.91
SNX13-204ENST00000444712 PTCH1Q13635 1447 aa20.71■□□□□ 0.91
SNX13-204ENST00000444712 EDC4Q6P2E9 1401 aaKnown RBP20.71■□□□□ 0.91
SNX13-204ENST00000444712 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.71■□□□□ 0.91
SNX13-204ENST00000444712 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
SNX13-204ENST00000444712 CPSF1Q10570 1443 aaKnown RBP20.71■□□□□ 0.91
SNX13-204ENST00000444712 ROBO2Q9HCK4 1378 aa20.71■□□□□ 0.91
SNX13-204ENST00000444712 ZNF521Q96K83 1311 aa20.7■□□□□ 0.9
SNX13-204ENST00000444712 FYB1O15117 783 aa20.7■□□□□ 0.9
SNX13-204ENST00000444712 RCAN3Q9UKA8 241 aa20.7■□□□□ 0.9
SNX13-204ENST00000444712 SETD1BQ9UPS6 1966 aaKnown RBP20.69■□□□□ 0.9
SNX13-204ENST00000444712 XRN1Q8IZH2 1706 aaKnown RBP20.69■□□□□ 0.9
SNX13-204ENST00000444712 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
SNX13-204ENST00000444712 CCDC61Q9Y6R9 512 aa20.68■□□□□ 0.9
SNX13-204ENST00000444712 PIK3R4Q99570 1358 aa20.68■□□□□ 0.9
SNX13-204ENST00000444712 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
SNX13-204ENST00000444712 NUDT16Q96DE0 195 aaKnown RBP20.68■□□□□ 0.9
SNX13-204ENST00000444712 GGNBP2Q9H3C7 697 aa20.68■□□□□ 0.9
SNX13-204ENST00000444712 CDCA7LQ96GN5 454 aa20.66■□□□□ 0.9
SNX13-204ENST00000444712 PTPRUQ92729 1446 aa20.66■□□□□ 0.9
SNX13-204ENST00000444712 CCDC146Q8IYE0 955 aa20.66■□□□□ 0.9
SNX13-204ENST00000444712 RUNDC1Q96C34 613 aa20.65■□□□□ 0.9
SNX13-204ENST00000444712 APAF1O14727 1248 aa20.65■□□□□ 0.9
SNX13-204ENST00000444712 NCBP3Q53F19 620 aaKnown RBP20.65■□□□□ 0.9
SNX13-204ENST00000444712 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
SNX13-204ENST00000444712 RRP1P56182 461 aaKnown RBP20.64■□□□□ 0.89
SNX13-204ENST00000444712 SLC26A8Q96RN1 970 aa20.64■□□□□ 0.89
SNX13-204ENST00000444712 IQSEC2Q5JU85 1478 aa20.64■□□□□ 0.89
SNX13-204ENST00000444712 COL3A1P02461 1466 aaPredicted RBP20.63■□□□□ 0.89
SNX13-204ENST00000444712 AMOTL2Q9Y2J4 779 aa20.62■□□□□ 0.89
SNX13-204ENST00000444712 MAP2P11137 1827 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms