RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 BECN1Q14457 450 aa13.37□□□□□ -0.27
TOP3B-210ENST00000444502 SPRYD3Q8NCJ5 442 aa13.37□□□□□ -0.27
TOP3B-210ENST00000444502 MS4A1P11836 297 aa13.37□□□□□ -0.27
TOP3B-210ENST00000444502 CALD1Q05682 793 aaKnown RBP13.36□□□□□ -0.27
TOP3B-210ENST00000444502 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
TOP3B-210ENST00000444502 ABCA8O94911 1581 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 DUOX2Q9NRD8 1548 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 RIPK4P57078 832 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-210ENST00000444502 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 A2MP01023 1474 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 ABCC2Q92887 1545 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-210ENST00000444502 UHRF1BP1Q6BDS2 1440 aa13.35□□□□□ -0.27
TOP3B-210ENST00000444502 NOS1P29475 1434 aa13.34□□□□□ -0.27
TOP3B-210ENST00000444502 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
TOP3B-210ENST00000444502 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
TOP3B-210ENST00000444502 IPO8O15397 1037 aaKnown RBP13.34□□□□□ -0.27
TOP3B-210ENST00000444502 TEFQ10587 303 aa13.34□□□□□ -0.27
TOP3B-210ENST00000444502 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
TOP3B-210ENST00000444502 KDM5BQ9UGL1 1544 aa13.33□□□□□ -0.28
TOP3B-210ENST00000444502 SCAF11Q99590 1463 aaKnown RBP13.33□□□□□ -0.28
TOP3B-210ENST00000444502 SLKQ9H2G2 1235 aaPredicted RBP13.32□□□□□ -0.28
TOP3B-210ENST00000444502 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
TOP3B-210ENST00000444502 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
TOP3B-210ENST00000444502 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
TOP3B-210ENST00000444502 SLFN5Q08AF3 891 aa13.32□□□□□ -0.28
TOP3B-210ENST00000444502 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
TOP3B-210ENST00000444502 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
TOP3B-210ENST00000444502 ARHGEF12Q9NZN5 1544 aa13.31□□□□□ -0.28
TOP3B-210ENST00000444502 ZKSCAN2Q63HK3 967 aa13.31□□□□□ -0.28
TOP3B-210ENST00000444502 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
TOP3B-210ENST00000444502 RRS1Q15050 365 aaKnown RBP13.31□□□□□ -0.28
TOP3B-210ENST00000444502 RPGRIP1LQ68CZ1 1315 aa13.3□□□□□ -0.28
TOP3B-210ENST00000444502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.3□□□□□ -0.285e-7■□□□□ 8.9
TOP3B-210ENST00000444502 CHMP3Q9Y3E7 222 aa13.3□□□□□ -0.28
TOP3B-210ENST00000444502 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
TOP3B-210ENST00000444502 PIP4K2BP78356 416 aa13.29□□□□□ -0.28
TOP3B-210ENST00000444502 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
TOP3B-210ENST00000444502 AMOTL2Q9Y2J4 779 aa13.29□□□□□ -0.28
TOP3B-210ENST00000444502 ERCC6L2Q5T890 1561 aa13.29□□□□□ -0.28
TOP3B-210ENST00000444502 WWC1Q8IX03 1113 aa13.29□□□□□ -0.28
TOP3B-210ENST00000444502 C14orf93Q9H972 538 aaKnown RBP13.29□□□□□ -0.28
TOP3B-210ENST00000444502 STRN4Q9NRL3 753 aa13.29□□□□□ -0.28
TOP3B-210ENST00000444502 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
TOP3B-210ENST00000444502 TPRNQ4KMQ1 711 aa13.28□□□□□ -0.28
TOP3B-210ENST00000444502 FOXO3O43524 673 aa13.28□□□□□ -0.28
TOP3B-210ENST00000444502 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
TOP3B-210ENST00000444502 CARD14Q9BXL6 1004 aa13.28□□□□□ -0.28
TOP3B-210ENST00000444502 CHMP4BQ9H444 224 aaKnown RBP13.28□□□□□ -0.28
TOP3B-210ENST00000444502 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
TOP3B-210ENST00000444502 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
TOP3B-210ENST00000444502 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
TOP3B-210ENST00000444502 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
TOP3B-210ENST00000444502 EXOSC9Q06265 439 aaKnown RBP13.28□□□□□ -0.28
TOP3B-210ENST00000444502 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
TOP3B-210ENST00000444502 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
TOP3B-210ENST00000444502 DZIP1LQ8IYY4 767 aaKnown RBP13.27□□□□□ -0.29
TOP3B-210ENST00000444502 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
TOP3B-210ENST00000444502 ADGBQ8N7X0 1667 aa13.27□□□□□ -0.29
TOP3B-210ENST00000444502 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
TOP3B-210ENST00000444502 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
TOP3B-210ENST00000444502 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
TOP3B-210ENST00000444502 HSPA2P54652 639 aa13.26□□□□□ -0.29
TOP3B-210ENST00000444502 FBLN1P23142 703 aa13.26□□□□□ -0.29
TOP3B-210ENST00000444502 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
TOP3B-210ENST00000444502 ZNF518AQ6AHZ1 1483 aa13.25□□□□□ -0.29
TOP3B-210ENST00000444502 SULT6B1Q6IMI4 303 aa13.24□□□□□ -0.29
TOP3B-210ENST00000444502 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
TOP3B-210ENST00000444502 KCNJ4P48050 445 aa13.24□□□□□ -0.29
TOP3B-210ENST00000444502 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
TOP3B-210ENST00000444502 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
TOP3B-210ENST00000444502 COL17A1Q9UMD9 1497 aaPredicted RBP13.23□□□□□ -0.29
TOP3B-210ENST00000444502 FAM43AQ8N2R8 423 aa13.23□□□□□ -0.29
TOP3B-210ENST00000444502 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
TOP3B-210ENST00000444502 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
TOP3B-210ENST00000444502 ARHGEF5Q12774 1597 aa13.23□□□□□ -0.29
TOP3B-210ENST00000444502 CFAP65Q6ZU64 1925 aaKnown RBP13.23□□□□□ -0.29
TOP3B-210ENST00000444502 GZF1Q9H116 711 aaPredicted RBP13.23□□□□□ -0.29
TOP3B-210ENST00000444502 CASC1Q6TDU7 716 aa13.22□□□□□ -0.29
TOP3B-210ENST00000444502 PLEKHH1Q9ULM0 1364 aa13.22□□□□□ -0.29
TOP3B-210ENST00000444502 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
TOP3B-210ENST00000444502 NME9Q86XW9 330 aa13.22□□□□□ -0.29
TOP3B-210ENST00000444502 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
TOP3B-210ENST00000444502 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
TOP3B-210ENST00000444502 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
TOP3B-210ENST00000444502 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.3
TOP3B-210ENST00000444502 PDE3AQ14432 1141 aa13.21□□□□□ -0.3
TOP3B-210ENST00000444502 THUMPD2Q9BTF0 503 aaKnown RBP13.21□□□□□ -0.3
TOP3B-210ENST00000444502 TNRQ92752 1358 aa13.2□□□□□ -0.3
TOP3B-210ENST00000444502 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-210ENST00000444502 ANKRD45Q5TZF3 282 aa13.2□□□□□ -0.3
TOP3B-210ENST00000444502 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
TOP3B-210ENST00000444502 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-210ENST00000444502 KDM5CP41229 1560 aa13.19□□□□□ -0.3
TOP3B-210ENST00000444502 CHD1O14646 1710 aa13.19□□□□□ -0.3
TOP3B-210ENST00000444502 NAP1L2Q9ULW6 460 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-210ENST00000444502 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
TOP3B-210ENST00000444502 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms