RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 C8orf37Q96NL8 207 aa20.54■□□□□ 0.88
PTPRE-203ENST00000442830 RBM6P78332 1123 aaKnown RBP20.53■□□□□ 0.88
PTPRE-203ENST00000442830 ABCC11Q96J66 1382 aa20.52■□□□□ 0.88
PTPRE-203ENST00000442830 DDX17Q92841 729 aaKnown RBP20.52■□□□□ 0.88
PTPRE-203ENST00000442830 UPF1Q92900 1129 aaKnown RBP eCLIP20.52■□□□□ 0.88
PTPRE-203ENST00000442830 NGLY1Q96IV0 654 aa20.52■□□□□ 0.88
PTPRE-203ENST00000442830 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
PTPRE-203ENST00000442830 PIK3C2GO75747 1445 aa20.52■□□□□ 0.87
PTPRE-203ENST00000442830 ADGRF5Q8IZF2 1346 aa20.51■□□□□ 0.87
PTPRE-203ENST00000442830 FOXD1Q16676 465 aa20.5■□□□□ 0.87
PTPRE-203ENST00000442830 QTRT2Q9H974 415 aaKnown RBP20.5■□□□□ 0.87
PTPRE-203ENST00000442830 KIF1AQ12756 1690 aa20.5■□□□□ 0.87
PTPRE-203ENST00000442830 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
PTPRE-203ENST00000442830 MARF1Q9Y4F3 1742 aaKnown RBP20.48■□□□□ 0.87
PTPRE-203ENST00000442830 ESCO1Q5FWF5 840 aa20.48■□□□□ 0.87
PTPRE-203ENST00000442830 FMN2Q9NZ56 1722 aa20.47■□□□□ 0.87
PTPRE-203ENST00000442830 SIRT1Q96EB6 747 aa20.47■□□□□ 0.87
PTPRE-203ENST00000442830 RGS12O14924 1447 aa20.46■□□□□ 0.87
PTPRE-203ENST00000442830 YTHDC2Q9H6S0 1430 aaKnown RBP20.46■□□□□ 0.87
PTPRE-203ENST00000442830 MYOM2P54296 1465 aa20.46■□□□□ 0.87
PTPRE-203ENST00000442830 PXDNQ92626 1479 aa20.46■□□□□ 0.87
PTPRE-203ENST00000442830 ADAMTS2O95450 1211 aa20.46■□□□□ 0.87
PTPRE-203ENST00000442830 TRPC5Q9UL62 973 aaPredicted RBP20.46■□□□□ 0.87
PTPRE-203ENST00000442830 FNBP4Q8N3X1 1017 aaPredicted RBP20.44■□□□□ 0.86
PTPRE-203ENST00000442830 STK26Q9P289 416 aa20.44■□□□□ 0.86
PTPRE-203ENST00000442830 USP21Q9UK80 565 aa20.44■□□□□ 0.86
PTPRE-203ENST00000442830 NRXN1Q9ULB1 1477 aa20.43■□□□□ 0.86
PTPRE-203ENST00000442830 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
PTPRE-203ENST00000442830 ATAD2Q6PL18 1390 aa20.41■□□□□ 0.86
PTPRE-203ENST00000442830 FOXO3O43524 673 aa20.4■□□□□ 0.86
PTPRE-203ENST00000442830 ATRNO75882 1429 aa20.4■□□□□ 0.86
PTPRE-203ENST00000442830 WAPLQ7Z5K2 1190 aa20.4■□□□□ 0.86
PTPRE-203ENST00000442830 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.4■□□□□ 0.86
PTPRE-203ENST00000442830 C14orf93Q9H972 538 aaKnown RBP20.4■□□□□ 0.86
PTPRE-203ENST00000442830 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
PTPRE-203ENST00000442830 DLC1Q96QB1 1528 aa20.37■□□□□ 0.85
PTPRE-203ENST00000442830 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
PTPRE-203ENST00000442830 STAC3Q96MF2 364 aa20.36■□□□□ 0.85
PTPRE-203ENST00000442830 PSME1Q06323 249 aa20.35■□□□□ 0.85
PTPRE-203ENST00000442830 SPATA31A3Q5VYP0 1347 aa20.34■□□□□ 0.85
PTPRE-203ENST00000442830 RGPD8O14715 1765 aaPredicted RBP20.34■□□□□ 0.85
PTPRE-203ENST00000442830 ADGRB2O60241 1585 aa20.34■□□□□ 0.85
PTPRE-203ENST00000442830 EIF3AQ14152 1382 aaKnown RBP20.34■□□□□ 0.85
PTPRE-203ENST00000442830 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
PTPRE-203ENST00000442830 USP32Q8NFA0 1604 aa20.33■□□□□ 0.84
PTPRE-203ENST00000442830 ANKARQ7Z5J8 1434 aa20.33■□□□□ 0.84
PTPRE-203ENST00000442830 BCL9LQ86UU0 1499 aa20.32■□□□□ 0.84
PTPRE-203ENST00000442830 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
PTPRE-203ENST00000442830 TNS3Q68CZ2 1445 aa20.32■□□□□ 0.84
PTPRE-203ENST00000442830 XPCQ01831 940 aaPredicted RBP20.31■□□□□ 0.84
PTPRE-203ENST00000442830 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
PTPRE-203ENST00000442830 SBNO1A3KN83 1393 aa20.31■□□□□ 0.84
PTPRE-203ENST00000442830 ARHGEF10O15013 1369 aa20.31■□□□□ 0.84
PTPRE-203ENST00000442830 CFAP70Q5T0N1 1121 aa20.3■□□□□ 0.84
PTPRE-203ENST00000442830 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
PTPRE-203ENST00000442830 CCDC125Q86Z20 511 aa20.3■□□□□ 0.84
PTPRE-203ENST00000442830 POGKQ9P215 609 aa20.29■□□□□ 0.84
PTPRE-203ENST00000442830 NWD2Q9ULI1 1742 aa20.29■□□□□ 0.84
PTPRE-203ENST00000442830 SLIT2O94813 1529 aa20.28■□□□□ 0.84
PTPRE-203ENST00000442830 HRCP23327 699 aa20.28■□□□□ 0.84
PTPRE-203ENST00000442830 UNC5CLQ8IV45 518 aa20.28■□□□□ 0.84
PTPRE-203ENST00000442830 GJD4Q96KN9 370 aaPredicted RBP20.28■□□□□ 0.84
PTPRE-203ENST00000442830 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
PTPRE-203ENST00000442830 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.84
PTPRE-203ENST00000442830 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
PTPRE-203ENST00000442830 ABCA3Q99758 1704 aa20.25■□□□□ 0.83
PTPRE-203ENST00000442830 EP400Q96L91 3159 aa20.24■□□□□ 0.83
PTPRE-203ENST00000442830 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
PTPRE-203ENST00000442830 RALGAPBQ86X10 1494 aa20.22■□□□□ 0.83
PTPRE-203ENST00000442830 TULP4Q9NRJ4 1543 aa20.22■□□□□ 0.83
PTPRE-203ENST00000442830 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
PTPRE-203ENST00000442830 GPRASP1Q5JY77 1395 aa20.21■□□□□ 0.83
PTPRE-203ENST00000442830 SAFB2Q14151 953 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTPRE-203ENST00000442830 GLI3P10071 1580 aa20.21■□□□□ 0.83
PTPRE-203ENST00000442830 TRPM3Q9HCF6 1732 aaPredicted RBP20.19■□□□□ 0.82
PTPRE-203ENST00000442830 DCAF11Q8TEB1 546 aa20.19■□□□□ 0.82
PTPRE-203ENST00000442830 VPS72Q15906 364 aa20.18■□□□□ 0.82
PTPRE-203ENST00000442830 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
PTPRE-203ENST00000442830 ALS2Q96Q42 1657 aa20.17■□□□□ 0.82
PTPRE-203ENST00000442830 LMOD2Q6P5Q4 547 aa20.17■□□□□ 0.82
PTPRE-203ENST00000442830 ZRANB1Q9UGI0 708 aa20.17■□□□□ 0.82
PTPRE-203ENST00000442830 ARHGEF28Q8N1W1 1705 aaKnown RBP20.16■□□□□ 0.82
PTPRE-203ENST00000442830 BLMP54132 1417 aaPredicted RBP20.16■□□□□ 0.82
PTPRE-203ENST00000442830 KIAA1210Q9ULL0 1709 aa20.16■□□□□ 0.82
PTPRE-203ENST00000442830 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
PTPRE-203ENST00000442830 WASLO00401 505 aaPredicted RBP20.15■□□□□ 0.82
PTPRE-203ENST00000442830 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
PTPRE-203ENST00000442830 COL14A1Q05707 1796 aaKnown RBP20.15■□□□□ 0.82
PTPRE-203ENST00000442830 PMFBP1Q8TBY8 1022 aa20.14■□□□□ 0.81
PTPRE-203ENST00000442830 MINK1Q8N4C8 1332 aaPredicted RBP20.13■□□□□ 0.81
PTPRE-203ENST00000442830 ONECUT3O60422 494 aaPredicted RBP20.12■□□□□ 0.81
PTPRE-203ENST00000442830 SF3B2Q13435 895 aaKnown RBP20.12■□□□□ 0.81
PTPRE-203ENST00000442830 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
PTPRE-203ENST00000442830 CCDC9Q9Y3X0 531 aaKnown RBP20.12■□□□□ 0.81
PTPRE-203ENST00000442830 NRAPQ86VF7 1730 aa20.12■□□□□ 0.81
PTPRE-203ENST00000442830 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
PTPRE-203ENST00000442830 SEPT12Q8IYM1 358 aa20.1■□□□□ 0.81
PTPRE-203ENST00000442830 NGDNQ8NEJ9 315 aaKnown RBP20.1■□□□□ 0.81
PTPRE-203ENST00000442830 ATP7BP35670 1465 aa20.1■□□□□ 0.81
PTPRE-203ENST00000442830 CRYBG1Q9Y4K1 1723 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms