RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 ANKRD30BQ9BXX2 1392 aa15.13■□□□□ 0.01
HDLBP-219ENST00000442714 SHPRHQ149N8 1683 aa15.13■□□□□ 0.01
HDLBP-219ENST00000442714 FOXO3O43524 673 aa15.13■□□□□ 0.01
HDLBP-219ENST00000442714 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
HDLBP-219ENST00000442714 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
HDLBP-219ENST00000442714 C14orf93Q9H972 538 aaKnown RBP15.12■□□□□ 0.01
HDLBP-219ENST00000442714 LRPPRCP42704 1394 aaKnown RBP15.11■□□□□ 0.01
HDLBP-219ENST00000442714 CDK12Q9NYV4 1490 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-219ENST00000442714 USP21Q9UK80 565 aa15.1■□□□□ 0.01
HDLBP-219ENST00000442714 NPHP3Q7Z494 1330 aa15.1■□□□□ 0.01
HDLBP-219ENST00000442714 KIF1BO60333 1816 aa15.09■□□□□ 0.01
HDLBP-219ENST00000442714 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
HDLBP-219ENST00000442714 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
HDLBP-219ENST00000442714 TRPC5Q9UL62 973 aaPredicted RBP15.08■□□□□ 0
HDLBP-219ENST00000442714 PLEKHH1Q9ULM0 1364 aa15.08■□□□□ 0
HDLBP-219ENST00000442714 TECPR2O15040 1411 aa15.08■□□□□ 0
HDLBP-219ENST00000442714 NHSL1Q5SYE7 1610 aa15.07■□□□□ 0
HDLBP-219ENST00000442714 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
HDLBP-219ENST00000442714 KRT28Q7Z3Y7 464 aa15.05■□□□□ -0
HDLBP-219ENST00000442714 NALCNQ8IZF0 1738 aa15.05■□□□□ -0
HDLBP-219ENST00000442714 SETD1AO15047 1707 aaKnown RBP15.04■□□□□ -0
HDLBP-219ENST00000442714 PIK3C2GO75747 1445 aa15.04■□□□□ -0
HDLBP-219ENST00000442714 LAMC1P11047 1609 aa15.03■□□□□ -0
HDLBP-219ENST00000442714 YTHDC2Q9H6S0 1430 aaKnown RBP15.03■□□□□ -0
HDLBP-219ENST00000442714 SPATA31A3Q5VYP0 1347 aa15.03■□□□□ -0
HDLBP-219ENST00000442714 RGS12O14924 1447 aa15.02■□□□□ -0
HDLBP-219ENST00000442714 DHX57Q6P158 1386 aaKnown RBP15.02■□□□□ -0
HDLBP-219ENST00000442714 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
HDLBP-219ENST00000442714 PXDNQ92626 1479 aa15.01□□□□□ -0.01
HDLBP-219ENST00000442714 GJD4Q96KN9 370 aaPredicted RBP15.01□□□□□ -0.01
HDLBP-219ENST00000442714 PRAM1Q96QH2 718 aa15.01□□□□□ -0.01
HDLBP-219ENST00000442714 PHF8Q9UPP1 1060 aa15.01□□□□□ -0.01
HDLBP-219ENST00000442714 MYOM2P54296 1465 aa15.01□□□□□ -0.01
HDLBP-219ENST00000442714 PPLO60437 1756 aa15.01□□□□□ -0.01
HDLBP-219ENST00000442714 PSME1Q06323 249 aa15□□□□□ -0.01
HDLBP-219ENST00000442714 ATRNO75882 1429 aa15□□□□□ -0.01
HDLBP-219ENST00000442714 HRCP23327 699 aa14.99□□□□□ -0.01
HDLBP-219ENST00000442714 UNC5CLQ8IV45 518 aa14.99□□□□□ -0.01
HDLBP-219ENST00000442714 NRXN1Q9ULB1 1477 aa14.98□□□□□ -0.01
HDLBP-219ENST00000442714 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDLBP-219ENST00000442714 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
HDLBP-219ENST00000442714 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
HDLBP-219ENST00000442714 POGKQ9P215 609 aa14.97□□□□□ -0.01
HDLBP-219ENST00000442714 CCDC125Q86Z20 511 aa14.96□□□□□ -0.01
HDLBP-219ENST00000442714 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
HDLBP-219ENST00000442714 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
HDLBP-219ENST00000442714 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
HDLBP-219ENST00000442714 KDM2AQ9Y2K7 1162 aa14.96□□□□□ -0.01
HDLBP-219ENST00000442714 ATAD2Q6PL18 1390 aa14.96□□□□□ -0.02
HDLBP-219ENST00000442714 ONECUT3O60422 494 aaPredicted RBP14.95□□□□□ -0.02
HDLBP-219ENST00000442714 TRAK1Q9UPV9 953 aa14.95□□□□□ -0.02
HDLBP-219ENST00000442714 SRCAPQ6ZRS2 3230 aa14.94□□□□□ -0.02
HDLBP-219ENST00000442714 FAM83GA6ND36 823 aa14.94□□□□□ -0.02
HDLBP-219ENST00000442714 PMFBP1Q8TBY8 1022 aa14.94□□□□□ -0.02
HDLBP-219ENST00000442714 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
HDLBP-219ENST00000442714 COL22A1Q8NFW1 1626 aaPredicted RBP14.92□□□□□ -0.02
HDLBP-219ENST00000442714 VPS72Q15906 364 aa14.91□□□□□ -0.02
HDLBP-219ENST00000442714 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
HDLBP-219ENST00000442714 HIRIP3Q9BW71 556 aaPredicted RBP14.91□□□□□ -0.02
HDLBP-219ENST00000442714 SLIT2O94813 1529 aa14.91□□□□□ -0.02
HDLBP-219ENST00000442714 WASLO00401 505 aaPredicted RBP14.9□□□□□ -0.02
HDLBP-219ENST00000442714 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
HDLBP-219ENST00000442714 HAP1P54257 671 aaPredicted RBP14.89□□□□□ -0.03
HDLBP-219ENST00000442714 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
HDLBP-219ENST00000442714 MINK1Q8N4C8 1332 aaPredicted RBP14.89□□□□□ -0.03
HDLBP-219ENST00000442714 PRR36Q9H6K5 1346 aa14.89□□□□□ -0.03
HDLBP-219ENST00000442714 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
HDLBP-219ENST00000442714 ARHGEF10O15013 1369 aa14.87□□□□□ -0.03
HDLBP-219ENST00000442714 IFT172Q9UG01 1749 aa14.87□□□□□ -0.03
HDLBP-219ENST00000442714 TNS3Q68CZ2 1445 aa14.87□□□□□ -0.03
HDLBP-219ENST00000442714 RALGAPBQ86X10 1494 aa14.87□□□□□ -0.03
HDLBP-219ENST00000442714 ANKARQ7Z5J8 1434 aa14.86□□□□□ -0.03
HDLBP-219ENST00000442714 DLC1Q96QB1 1528 aa14.86□□□□□ -0.03
HDLBP-219ENST00000442714 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
HDLBP-219ENST00000442714 FMN2Q9NZ56 1722 aa14.84□□□□□ -0.03
HDLBP-219ENST00000442714 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
HDLBP-219ENST00000442714 NUDT16Q96DE0 195 aaKnown RBP14.84□□□□□ -0.03
HDLBP-219ENST00000442714 EP400Q96L91 3159 aa14.84□□□□□ -0.03
HDLBP-219ENST00000442714 GPRASP1Q5JY77 1395 aa14.84□□□□□ -0.03
HDLBP-219ENST00000442714 KNDC1Q76NI1 1749 aa14.83□□□□□ -0.03
HDLBP-219ENST00000442714 BTG4Q9NY30 223 aa14.83□□□□□ -0.04
HDLBP-219ENST00000442714 CCDC9Q9Y3X0 531 aaKnown RBP14.83□□□□□ -0.04
HDLBP-219ENST00000442714 KRT27Q7Z3Y8 459 aa14.82□□□□□ -0.04
HDLBP-219ENST00000442714 CDK19Q9BWU1 502 aa14.82□□□□□ -0.04
HDLBP-219ENST00000442714 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
HDLBP-219ENST00000442714 DEFB132Q7Z7B7 95 aa14.81□□□□□ -0.04
HDLBP-219ENST00000442714 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
HDLBP-219ENST00000442714 NBPF8Q3BBV2 869 aa14.8□□□□□ -0.04
HDLBP-219ENST00000442714 EIF3AQ14152 1382 aaKnown RBP14.8□□□□□ -0.04
HDLBP-219ENST00000442714 KIF1AQ12756 1690 aa14.8□□□□□ -0.04
HDLBP-219ENST00000442714 PLEKHG3A1L390 1219 aa14.79□□□□□ -0.04
HDLBP-219ENST00000442714 BLMP54132 1417 aaPredicted RBP14.79□□□□□ -0.04
HDLBP-219ENST00000442714 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
HDLBP-219ENST00000442714 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
HDLBP-219ENST00000442714 GLI3P10071 1580 aa14.78□□□□□ -0.04
HDLBP-219ENST00000442714 SPATA31A5Q5VU36 1347 aa14.77□□□□□ -0.04
HDLBP-219ENST00000442714 SPATA31A7Q8IWB4 1347 aa14.77□□□□□ -0.04
HDLBP-219ENST00000442714 SF3B2Q13435 895 aaKnown RBP14.77□□□□□ -0.05
HDLBP-219ENST00000442714 ACEP12821 1306 aa14.75□□□□□ -0.05
HDLBP-219ENST00000442714 USP32Q8NFA0 1604 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms