RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
HDLBP-219ENST00000442714 ABCC9O60706 1549 aa22.79■■□□□ 1.24
HDLBP-219ENST00000442714 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
HDLBP-219ENST00000442714 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
HDLBP-219ENST00000442714 DCAF8L2P0C7V8 631 aa21.59■■□□□ 1.05
HDLBP-219ENST00000442714 RB1CC1Q8TDY2 1594 aa21.59■■□□□ 1.05
HDLBP-219ENST00000442714 NACADO15069 1562 aa21.48■■□□□ 1.03
HDLBP-219ENST00000442714 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
HDLBP-219ENST00000442714 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
HDLBP-219ENST00000442714 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
HDLBP-219ENST00000442714 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
HDLBP-219ENST00000442714 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
HDLBP-219ENST00000442714 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
HDLBP-219ENST00000442714 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
HDLBP-219ENST00000442714 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
HDLBP-219ENST00000442714 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
HDLBP-219ENST00000442714 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
HDLBP-219ENST00000442714 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
HDLBP-219ENST00000442714 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
HDLBP-219ENST00000442714 DNAJC5Q9H3Z4 198 aa19.88■□□□□ 0.77
HDLBP-219ENST00000442714 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
HDLBP-219ENST00000442714 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
HDLBP-219ENST00000442714 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
HDLBP-219ENST00000442714 ERCC6Q03468 1493 aa19.65■□□□□ 0.74
HDLBP-219ENST00000442714 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
HDLBP-219ENST00000442714 CUX2O14529 1486 aa19.63■□□□□ 0.73
HDLBP-219ENST00000442714 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
HDLBP-219ENST00000442714 BAZ1BQ9UIG0 1483 aaKnown RBP19.59■□□□□ 0.73
HDLBP-219ENST00000442714 NESP48681 1621 aa19.58■□□□□ 0.72
HDLBP-219ENST00000442714 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
HDLBP-219ENST00000442714 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
HDLBP-219ENST00000442714 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
HDLBP-219ENST00000442714 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
HDLBP-219ENST00000442714 LAMC3Q9Y6N6 1575 aa19.35■□□□□ 0.69
HDLBP-219ENST00000442714 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
HDLBP-219ENST00000442714 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
HDLBP-219ENST00000442714 WIZO95785 1651 aa19.2■□□□□ 0.66
HDLBP-219ENST00000442714 MRC2Q9UBG0 1479 aa19.13■□□□□ 0.65
HDLBP-219ENST00000442714 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
HDLBP-219ENST00000442714 CFTRP13569 1480 aa19.09■□□□□ 0.65
HDLBP-219ENST00000442714 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
HDLBP-219ENST00000442714 WDR62O43379 1518 aa19.04■□□□□ 0.64
HDLBP-219ENST00000442714 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
HDLBP-219ENST00000442714 TOP2AP11388 1531 aaKnown RBP18.98■□□□□ 0.63
HDLBP-219ENST00000442714 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
HDLBP-219ENST00000442714 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
HDLBP-219ENST00000442714 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
HDLBP-219ENST00000442714 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
HDLBP-219ENST00000442714 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
HDLBP-219ENST00000442714 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
HDLBP-219ENST00000442714 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
HDLBP-219ENST00000442714 ABCC8Q09428 1581 aa18.66■□□□□ 0.58
HDLBP-219ENST00000442714 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.562e-6■■■■□ 23.9
HDLBP-219ENST00000442714 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
HDLBP-219ENST00000442714 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
HDLBP-219ENST00000442714 SOGA1O94964 1423 aa18.49■□□□□ 0.55
HDLBP-219ENST00000442714 FBLN2P98095 1184 aa18.49■□□□□ 0.55
HDLBP-219ENST00000442714 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
HDLBP-219ENST00000442714 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
HDLBP-219ENST00000442714 CYB5RLQ6IPT4 315 aa18.47■□□□□ 0.55
HDLBP-219ENST00000442714 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
HDLBP-219ENST00000442714 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
HDLBP-219ENST00000442714 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
HDLBP-219ENST00000442714 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
HDLBP-219ENST00000442714 RIMBP3CA6NJZ7 1639 aa18.41■□□□□ 0.54
HDLBP-219ENST00000442714 RIMBP3BA6NNM3 1639 aa18.41■□□□□ 0.54
HDLBP-219ENST00000442714 RIMBP3Q9UFD9 1639 aa18.41■□□□□ 0.54
HDLBP-219ENST00000442714 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
HDLBP-219ENST00000442714 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
HDLBP-219ENST00000442714 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
HDLBP-219ENST00000442714 CUX1P39880 1505 aa18.33■□□□□ 0.53
HDLBP-219ENST00000442714 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
HDLBP-219ENST00000442714 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
HDLBP-219ENST00000442714 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
HDLBP-219ENST00000442714 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
HDLBP-219ENST00000442714 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
HDLBP-219ENST00000442714 CHD1O14646 1710 aa18.22■□□□□ 0.51
HDLBP-219ENST00000442714 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
HDLBP-219ENST00000442714 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
HDLBP-219ENST00000442714 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
HDLBP-219ENST00000442714 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
HDLBP-219ENST00000442714 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
HDLBP-219ENST00000442714 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
HDLBP-219ENST00000442714 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
HDLBP-219ENST00000442714 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
HDLBP-219ENST00000442714 GRIN2AQ12879 1464 aa18■□□□□ 0.47
HDLBP-219ENST00000442714 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
HDLBP-219ENST00000442714 NUP160Q12769 1436 aa17.98■□□□□ 0.47
HDLBP-219ENST00000442714 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
HDLBP-219ENST00000442714 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
HDLBP-219ENST00000442714 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
HDLBP-219ENST00000442714 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
HDLBP-219ENST00000442714 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
HDLBP-219ENST00000442714 ERCC6L2Q5T890 1561 aa17.89■□□□□ 0.45
HDLBP-219ENST00000442714 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
HDLBP-219ENST00000442714 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
HDLBP-219ENST00000442714 IGF1RP08069 1367 aa17.86■□□□□ 0.45
HDLBP-219ENST00000442714 PRG4Q92954 1404 aaPredicted RBP17.85■□□□□ 0.45
HDLBP-219ENST00000442714 SHROOM2Q13796 1616 aa17.78■□□□□ 0.44
HDLBP-219ENST00000442714 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms