RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
LYSMD1-202ENST00000440902 NGLY1Q96IV0 654 aa12.08□□□□□ -0.48
LYSMD1-202ENST00000440902 RBM6P78332 1123 aaKnown RBP12.07□□□□□ -0.48
LYSMD1-202ENST00000440902 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
LYSMD1-202ENST00000440902 SOS2Q07890 1332 aaPredicted RBP12.07□□□□□ -0.48
LYSMD1-202ENST00000440902 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
LYSMD1-202ENST00000440902 ADGRF5Q8IZF2 1346 aa12.05□□□□□ -0.48
LYSMD1-202ENST00000440902 PXDNQ92626 1479 aa12.04□□□□□ -0.48
LYSMD1-202ENST00000440902 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
LYSMD1-202ENST00000440902 RGL3Q3MIN7 710 aa12.04□□□□□ -0.48
LYSMD1-202ENST00000440902 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
LYSMD1-202ENST00000440902 STK26Q9P289 416 aa12.04□□□□□ -0.48
LYSMD1-202ENST00000440902 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
LYSMD1-202ENST00000440902 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
LYSMD1-202ENST00000440902 USP21Q9UK80 565 aa12.03□□□□□ -0.48
LYSMD1-202ENST00000440902 NPHP3Q7Z494 1330 aa12.03□□□□□ -0.48
LYSMD1-202ENST00000440902 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
LYSMD1-202ENST00000440902 RGPD8O14715 1765 aaPredicted RBP12.02□□□□□ -0.48
LYSMD1-202ENST00000440902 MYOM2P54296 1465 aa12.02□□□□□ -0.48
LYSMD1-202ENST00000440902 TECPR2O15040 1411 aa12.02□□□□□ -0.49
LYSMD1-202ENST00000440902 KIF1AQ12756 1690 aa12.01□□□□□ -0.49
LYSMD1-202ENST00000440902 WAPLQ7Z5K2 1190 aa12.01□□□□□ -0.49
LYSMD1-202ENST00000440902 LRPPRCP42704 1394 aaKnown RBP12.01□□□□□ -0.49
LYSMD1-202ENST00000440902 PLEKHH1Q9ULM0 1364 aa12.01□□□□□ -0.49
LYSMD1-202ENST00000440902 ATRNO75882 1429 aa12.01□□□□□ -0.49
LYSMD1-202ENST00000440902 FOXO3O43524 673 aa12□□□□□ -0.49
LYSMD1-202ENST00000440902 TMEM132EQ6IEE7 984 aa12□□□□□ -0.49
LYSMD1-202ENST00000440902 TRPC5Q9UL62 973 aaPredicted RBP12□□□□□ -0.49
LYSMD1-202ENST00000440902 ATAD2Q6PL18 1390 aa12□□□□□ -0.49
LYSMD1-202ENST00000440902 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
LYSMD1-202ENST00000440902 PIK3C2GO75747 1445 aa12□□□□□ -0.49
LYSMD1-202ENST00000440902 TNKS1BP1Q9C0C2 1729 aaKnown RBP12□□□□□ -0.49
LYSMD1-202ENST00000440902 MPHOSPH9Q99550 1183 aa11.99□□□□□ -0.49
LYSMD1-202ENST00000440902 YTHDC2Q9H6S0 1430 aaKnown RBP11.98□□□□□ -0.49
LYSMD1-202ENST00000440902 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
LYSMD1-202ENST00000440902 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
LYSMD1-202ENST00000440902 ABCC11Q96J66 1382 aa11.97□□□□□ -0.49
LYSMD1-202ENST00000440902 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
LYSMD1-202ENST00000440902 ABCA3Q99758 1704 aa11.96□□□□□ -0.49
LYSMD1-202ENST00000440902 PLCH1Q4KWH8 1693 aa11.96□□□□□ -0.5
LYSMD1-202ENST00000440902 BRWD3Q6RI45 1802 aa11.95□□□□□ -0.5
LYSMD1-202ENST00000440902 GLI3P10071 1580 aa11.94□□□□□ -0.5
LYSMD1-202ENST00000440902 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
LYSMD1-202ENST00000440902 SPATA31A3Q5VYP0 1347 aa11.93□□□□□ -0.5
LYSMD1-202ENST00000440902 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
LYSMD1-202ENST00000440902 KRT28Q7Z3Y7 464 aa11.93□□□□□ -0.5
LYSMD1-202ENST00000440902 NRXN1Q9ULB1 1477 aa11.93□□□□□ -0.5
LYSMD1-202ENST00000440902 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
LYSMD1-202ENST00000440902 SLIT2O94813 1529 aa11.92□□□□□ -0.5
LYSMD1-202ENST00000440902 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
LYSMD1-202ENST00000440902 HAP1P54257 671 aaPredicted RBP11.92□□□□□ -0.5
LYSMD1-202ENST00000440902 CFAP70Q5T0N1 1121 aa11.92□□□□□ -0.5
LYSMD1-202ENST00000440902 GJD4Q96KN9 370 aaPredicted RBP11.92□□□□□ -0.5
LYSMD1-202ENST00000440902 DHX57Q6P158 1386 aaKnown RBP11.92□□□□□ -0.5
LYSMD1-202ENST00000440902 NWD2Q9ULI1 1742 aa11.91□□□□□ -0.5
LYSMD1-202ENST00000440902 UNC5CLQ8IV45 518 aa11.91□□□□□ -0.5
LYSMD1-202ENST00000440902 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
LYSMD1-202ENST00000440902 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
LYSMD1-202ENST00000440902 PRAM1Q96QH2 718 aa11.9□□□□□ -0.5
LYSMD1-202ENST00000440902 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
LYSMD1-202ENST00000440902 DLC1Q96QB1 1528 aa11.9□□□□□ -0.5
LYSMD1-202ENST00000440902 TRPM3Q9HCF6 1732 aaPredicted RBP11.89□□□□□ -0.51
LYSMD1-202ENST00000440902 ADGRB2O60241 1585 aa11.89□□□□□ -0.51
LYSMD1-202ENST00000440902 PSME1Q06323 249 aa11.89□□□□□ -0.51
LYSMD1-202ENST00000440902 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
LYSMD1-202ENST00000440902 SIRT1Q96EB6 747 aa11.89□□□□□ -0.51
LYSMD1-202ENST00000440902 POGKQ9P215 609 aa11.88□□□□□ -0.51
LYSMD1-202ENST00000440902 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
LYSMD1-202ENST00000440902 RAB3GAP2Q9H2M9 1393 aa11.88□□□□□ -0.51
LYSMD1-202ENST00000440902 NRAPQ86VF7 1730 aa11.88□□□□□ -0.51
LYSMD1-202ENST00000440902 ADGRB1O14514 1584 aa11.88□□□□□ -0.51
LYSMD1-202ENST00000440902 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
LYSMD1-202ENST00000440902 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
LYSMD1-202ENST00000440902 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
LYSMD1-202ENST00000440902 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
LYSMD1-202ENST00000440902 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
LYSMD1-202ENST00000440902 KCNA4P22459 653 aa11.86□□□□□ -0.51
LYSMD1-202ENST00000440902 CCDC125Q86Z20 511 aa11.86□□□□□ -0.51
LYSMD1-202ENST00000440902 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
LYSMD1-202ENST00000440902 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
LYSMD1-202ENST00000440902 ARHGEF10O15013 1369 aa11.86□□□□□ -0.51
LYSMD1-202ENST00000440902 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
LYSMD1-202ENST00000440902 ITSN1Q15811 1721 aa11.85□□□□□ -0.51
LYSMD1-202ENST00000440902 ARHGEF28Q8N1W1 1705 aaKnown RBP11.85□□□□□ -0.51
LYSMD1-202ENST00000440902 CRYBG1Q9Y4K1 1723 aa11.85□□□□□ -0.51
LYSMD1-202ENST00000440902 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
LYSMD1-202ENST00000440902 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
LYSMD1-202ENST00000440902 EP400Q96L91 3159 aa11.84□□□□□ -0.51
LYSMD1-202ENST00000440902 VPS72Q15906 364 aa11.84□□□□□ -0.51
LYSMD1-202ENST00000440902 SEPT12Q8IYM1 358 aa11.84□□□□□ -0.51
LYSMD1-202ENST00000440902 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
LYSMD1-202ENST00000440902 TULP4Q9NRJ4 1543 aa11.84□□□□□ -0.51
LYSMD1-202ENST00000440902 MINK1Q8N4C8 1332 aaPredicted RBP11.84□□□□□ -0.51
LYSMD1-202ENST00000440902 A0A0G2JS52 829 aa11.83□□□□□ -0.52
LYSMD1-202ENST00000440902 MYT1Q01538 1121 aa11.83□□□□□ -0.52
LYSMD1-202ENST00000440902 SF3B2Q13435 895 aaKnown RBP11.82□□□□□ -0.52
LYSMD1-202ENST00000440902 DEFB132Q7Z7B7 95 aa11.82□□□□□ -0.52
LYSMD1-202ENST00000440902 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
LYSMD1-202ENST00000440902 PRR36Q9H6K5 1346 aa11.82□□□□□ -0.52
LYSMD1-202ENST00000440902 EIF3AQ14152 1382 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms