RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 MSH5O43196 834 aa16.88■□□□□ 0.29
AC009404.1-202ENST00000439955 USP21Q9UK80 565 aa16.88■□□□□ 0.29
AC009404.1-202ENST00000439955 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
AC009404.1-202ENST00000439955 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
AC009404.1-202ENST00000439955 CLTCL1P53675 1640 aa16.83■□□□□ 0.28
AC009404.1-202ENST00000439955 METP08581 1390 aa16.82■□□□□ 0.28
AC009404.1-202ENST00000439955 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
AC009404.1-202ENST00000439955 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
AC009404.1-202ENST00000439955 ADGRL3Q9HAR2 1447 aa16.79■□□□□ 0.28
AC009404.1-202ENST00000439955 ATRNO75882 1429 aa16.79■□□□□ 0.28
AC009404.1-202ENST00000439955 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
AC009404.1-202ENST00000439955 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
AC009404.1-202ENST00000439955 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
AC009404.1-202ENST00000439955 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
AC009404.1-202ENST00000439955 KIF1BO60333 1816 aa16.77■□□□□ 0.28
AC009404.1-202ENST00000439955 EP400Q96L91 3159 aa16.77■□□□□ 0.28
AC009404.1-202ENST00000439955 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
AC009404.1-202ENST00000439955 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
AC009404.1-202ENST00000439955 CCDC125Q86Z20 511 aa16.76■□□□□ 0.27
AC009404.1-202ENST00000439955 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
AC009404.1-202ENST00000439955 SOS2Q07890 1332 aaPredicted RBP16.75■□□□□ 0.27
AC009404.1-202ENST00000439955 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
AC009404.1-202ENST00000439955 DEFB132Q7Z7B7 95 aa16.74■□□□□ 0.27
AC009404.1-202ENST00000439955 STAC3Q96MF2 364 aa16.73■□□□□ 0.27
AC009404.1-202ENST00000439955 BCL9LQ86UU0 1499 aa16.72■□□□□ 0.27
AC009404.1-202ENST00000439955 GJD4Q96KN9 370 aaPredicted RBP16.71■□□□□ 0.27
AC009404.1-202ENST00000439955 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
AC009404.1-202ENST00000439955 IFT172Q9UG01 1749 aa16.69■□□□□ 0.26
AC009404.1-202ENST00000439955 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
AC009404.1-202ENST00000439955 MYOM2P54296 1465 aa16.68■□□□□ 0.26
AC009404.1-202ENST00000439955 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
AC009404.1-202ENST00000439955 LAMC1P11047 1609 aa16.67■□□□□ 0.26
AC009404.1-202ENST00000439955 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
AC009404.1-202ENST00000439955 PRAG1Q86YV5 1406 aa16.66■□□□□ 0.26
AC009404.1-202ENST00000439955 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
AC009404.1-202ENST00000439955 RALGAPBQ86X10 1494 aa16.66■□□□□ 0.26
AC009404.1-202ENST00000439955 ESCO1Q5FWF5 840 aa16.65■□□□□ 0.26
AC009404.1-202ENST00000439955 DCAF11Q8TEB1 546 aa16.65■□□□□ 0.26
AC009404.1-202ENST00000439955 PPLO60437 1756 aa16.64■□□□□ 0.25
AC009404.1-202ENST00000439955 SF3B2Q13435 895 aaKnown RBP16.64■□□□□ 0.25
AC009404.1-202ENST00000439955 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
AC009404.1-202ENST00000439955 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
AC009404.1-202ENST00000439955 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
AC009404.1-202ENST00000439955 FOXO3O43524 673 aa16.63■□□□□ 0.25
AC009404.1-202ENST00000439955 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
AC009404.1-202ENST00000439955 NEXMIFQ5QGS0 1516 aa16.62■□□□□ 0.25
AC009404.1-202ENST00000439955 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
AC009404.1-202ENST00000439955 GLI3P10071 1580 aa16.62■□□□□ 0.25
AC009404.1-202ENST00000439955 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
AC009404.1-202ENST00000439955 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
AC009404.1-202ENST00000439955 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
AC009404.1-202ENST00000439955 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
AC009404.1-202ENST00000439955 PXDNQ92626 1479 aa16.61■□□□□ 0.25
AC009404.1-202ENST00000439955 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
AC009404.1-202ENST00000439955 SEPT12Q8IYM1 358 aa16.6■□□□□ 0.25
AC009404.1-202ENST00000439955 LRP5O75197 1615 aa16.59■□□□□ 0.25
AC009404.1-202ENST00000439955 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
AC009404.1-202ENST00000439955 GPRASP1Q5JY77 1395 aa16.57■□□□□ 0.24
AC009404.1-202ENST00000439955 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
AC009404.1-202ENST00000439955 SLIT2O94813 1529 aa16.56■□□□□ 0.24
AC009404.1-202ENST00000439955 CCDC9Q9Y3X0 531 aaKnown RBP16.56■□□□□ 0.24
AC009404.1-202ENST00000439955 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
AC009404.1-202ENST00000439955 KRT27Q7Z3Y8 459 aa16.54■□□□□ 0.24
AC009404.1-202ENST00000439955 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
AC009404.1-202ENST00000439955 PIK3C2GO75747 1445 aa16.53■□□□□ 0.24
AC009404.1-202ENST00000439955 A0A0G2JS52 829 aa16.53■□□□□ 0.24
AC009404.1-202ENST00000439955 VGFO15240 615 aaPredicted RBP16.53■□□□□ 0.24
AC009404.1-202ENST00000439955 HAP1P54257 671 aaPredicted RBP16.53■□□□□ 0.24
AC009404.1-202ENST00000439955 MYT1Q01538 1121 aa16.53■□□□□ 0.24
AC009404.1-202ENST00000439955 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
AC009404.1-202ENST00000439955 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.53■□□□□ 0.24
AC009404.1-202ENST00000439955 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.24
AC009404.1-202ENST00000439955 BAG6P46379 1132 aa16.52■□□□□ 0.24
AC009404.1-202ENST00000439955 EIF4G2P78344 907 aaKnown RBP eCLIP16.52■□□□□ 0.24
AC009404.1-202ENST00000439955 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
AC009404.1-202ENST00000439955 SPATA31A3Q5VYP0 1347 aa16.51■□□□□ 0.23
AC009404.1-202ENST00000439955 R3HDM1Q15032 1099 aaKnown RBP16.51■□□□□ 0.23
AC009404.1-202ENST00000439955 VPS72Q15906 364 aa16.51■□□□□ 0.23
AC009404.1-202ENST00000439955 STK26Q9P289 416 aa16.51■□□□□ 0.23
AC009404.1-202ENST00000439955 CDC42BPGQ6DT37 1551 aa16.51■□□□□ 0.23
AC009404.1-202ENST00000439955 EN1Q05925 392 aaPredicted RBP16.5■□□□□ 0.23
AC009404.1-202ENST00000439955 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
AC009404.1-202ENST00000439955 ADGRF5Q8IZF2 1346 aa16.49■□□□□ 0.23
AC009404.1-202ENST00000439955 USP47Q96K76 1375 aa16.49■□□□□ 0.23
AC009404.1-202ENST00000439955 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
AC009404.1-202ENST00000439955 KRT28Q7Z3Y7 464 aa16.48■□□□□ 0.23
AC009404.1-202ENST00000439955 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
AC009404.1-202ENST00000439955 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
AC009404.1-202ENST00000439955 ONECUT3O60422 494 aaPredicted RBP16.47■□□□□ 0.23
AC009404.1-202ENST00000439955 HSPA5P11021 654 aaKnown RBP16.46■□□□□ 0.23
AC009404.1-202ENST00000439955 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
AC009404.1-202ENST00000439955 LMOD2Q6P5Q4 547 aa16.46■□□□□ 0.23
AC009404.1-202ENST00000439955 PLEKHH1Q9ULM0 1364 aa16.45■□□□□ 0.22
AC009404.1-202ENST00000439955 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
AC009404.1-202ENST00000439955 YY1P25490 414 aa16.44■□□□□ 0.22
AC009404.1-202ENST00000439955 NBPF1Q3BBV0 1214 aa16.44■□□□□ 0.22
AC009404.1-202ENST00000439955 C14orf93Q9H972 538 aaKnown RBP16.44■□□□□ 0.22
AC009404.1-202ENST00000439955 FAM83GA6ND36 823 aa16.43■□□□□ 0.22
AC009404.1-202ENST00000439955 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
AC009404.1-202ENST00000439955 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms